Obsolete: SUC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O6' | C6' | sing | 1.43Å | 1.36Å | |
C6' | C5' | sing | 1.53Å | 1.44Å | |
O2' | C5' | sing | 1.45Å | 1.44Å | |
O2' | C2' | sing | 1.44Å | 1.46Å | |
O1' | C1' | sing | 1.43Å | 1.32Å | |
C5' | C4' | sing | 1.55Å | 1.49Å | |
O6 | C6 | sing | 1.43Å | 1.40Å | |
O5 | C1 | sing | 1.43Å | 1.41Å | |
O5 | C5 | sing | 1.43Å | 1.46Å | |
C1' | C2' | sing | 1.53Å | 1.49Å | |
C1 | C2 | sing | 1.53Å | 1.53Å | |
C1 | O1 | sing | 1.43Å | 1.42Å | |
C2' | O1 | sing | 1.43Å | 1.44Å | |
C2' | C3' | sing | 1.54Å | 1.50Å | |
C6 | C5 | sing | 1.53Å | 1.48Å | |
C2 | O2 | sing | 1.43Å | 1.40Å | |
C2 | C3 | sing | 1.53Å | 1.46Å | |
C4' | C3' | sing | 1.55Å | 1.50Å | |
C4' | O4' | sing | 1.43Å | 1.42Å | |
C5 | C4 | sing | 1.53Å | 1.52Å | |
C3' | O3' | sing | 1.43Å | 1.41Å | |
C4 | C3 | sing | 1.53Å | 1.41Å | |
C4 | O4 | sing | 1.43Å | 1.44Å | |
C3 | O3 | sing | 1.43Å | 1.50Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å | |
C1' | H1'1 | sing | 1.09Å | 1.10Å | |
C1' | H1'2 | sing | 1.09Å | 1.10Å | |
C3' | H3' | sing | 1.09Å | 1.10Å | |
C4' | H4' | sing | 1.09Å | 1.10Å | |
C5' | H5' | sing | 1.09Å | 1.10Å | |
C6' | H6'1 | sing | 1.09Å | 1.10Å | |
C6' | H6'2 | sing | 1.09Å | 1.10Å | |
O1' | HO1' | sing | 0.97Å | 0.95Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
O4' | HO4' | sing | 0.97Å | 0.95Å | |
O6' | HO6' | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O6' | C6' | C5' | 110.7° | 109.5° |
O6' | C6' | H6'1 | 109.2° | 109.5° |
O6' | C6' | H6'2 | 109.1° | 109.5° |
C6' | O6' | HO6' | 109.5° | 114.0° |
C6' | C5' | O2' | 105.5° | 110.7° |
C6' | C5' | C4' | 115.4° | 110.7° |
C6' | C5' | H5' | 109.7° | 110.6° |
C5' | C6' | H6'1 | 109.2° | 109.5° |
C5' | C6' | H6'2 | 109.2° | 109.5° |
C5' | O2' | C2' | 107.2° | 106.7° |
O2' | C5' | C4' | 107.4° | 103.5° |
O2' | C5' | H5' | 109.7° | 110.6° |
O2' | C2' | C1' | 106.6° | 109.9° |
O2' | C2' | O1 | 111.9° | 109.8° |
O2' | C2' | C3' | 104.6° | 107.5° |
O1' | C1' | C2' | 112.7° | 109.4° |
O1' | C1' | H1'1 | 108.7° | 109.5° |
O1' | C1' | H1'2 | 108.6° | 109.4° |
C1' | O1' | HO1' | 109.5° | 113.9° |
C5' | C4' | C3' | 102.9° | 102.1° |
C5' | C4' | O4' | 110.4° | 110.9° |
C5' | C4' | H4' | 109.8° | 110.9° |
C4' | C5' | H5' | 109.1° | 110.6° |
O6 | C6 | C5 | 115.3° | 109.5° |
O6 | C6 | H61 | 108.0° | 109.5° |
O6 | C6 | H62 | 108.0° | 109.5° |
C6 | O6 | HO6 | 109.5° | 114.0° |
C1 | O5 | C5 | 112.5° | 114.1° |
O5 | C1 | C2 | 110.4° | 109.5° |
O5 | C1 | O1 | 109.6° | 109.5° |
O5 | C1 | H1 | 110.0° | 109.5° |
O5 | C5 | C6 | 108.1° | 109.5° |
O5 | C5 | C4 | 111.0° | 109.4° |
O5 | C5 | H5 | 109.7° | 109.5° |
C1' | C2' | O1 | 113.7° | 109.9° |
C1' | C2' | C3' | 110.6° | 109.9° |
C2' | C1' | H1'1 | 108.7° | 109.5° |
C2' | C1' | H1'2 | 108.7° | 109.5° |
C2 | C1 | O1 | 108.9° | 109.5° |
C1 | C2 | O2 | 108.5° | 109.6° |
C1 | C2 | C3 | 109.9° | 109.1° |
C2 | C1 | H1 | 108.3° | 109.5° |
C1 | C2 | H2 | 108.6° | 109.5° |
C1 | O1 | C2' | 113.9° | 114.0° |
O1 | C1 | H1 | 109.7° | 109.5° |
O1 | C2' | C3' | 109.0° | 109.9° |
C2' | C3' | C4' | 101.3° | 104.2° |
C2' | C3' | O3' | 110.2° | 110.5° |
C2' | C3' | H3' | 109.7° | 110.5° |
C6 | C5 | C4 | 110.0° | 109.5° |
C6 | C5 | H5 | 109.3° | 109.5° |
C5 | C6 | H61 | 108.0° | 109.5° |
C5 | C6 | H62 | 108.0° | 109.5° |
O2 | C2 | C3 | 109.9° | 109.5° |
O2 | C2 | H2 | 110.4° | 109.6° |
C2 | O2 | HO2 | 109.5° | 114.1° |
C2 | C3 | C4 | 111.7° | 109.1° |
C2 | C3 | O3 | 110.0° | 109.6° |
C3 | C2 | H2 | 109.5° | 109.5° |
C2 | C3 | H3 | 108.6° | 109.6° |
C3' | C4' | O4' | 113.0° | 110.9° |
C4' | C3' | O3' | 114.1° | 110.5° |
C4' | C3' | H3' | 109.8° | 110.6° |
C3' | C4' | H4' | 109.7° | 110.9° |
O4' | C4' | H4' | 110.8° | 110.9° |
C4' | O4' | HO4' | 109.5° | 114.0° |
C5 | C4 | C3 | 111.3° | 109.1° |
C5 | C4 | O4 | 107.1° | 109.5° |
C5 | C4 | H4 | 107.9° | 109.6° |
C4 | C5 | H5 | 108.8° | 109.5° |
O3' | C3' | H3' | 111.2° | 110.5° |
C3' | O3' | HO3' | 109.5° | 114.0° |
C3 | C4 | O4 | 112.0° | 109.5° |
C4 | C3 | O3 | 109.0° | 109.5° |
C4 | C3 | H3 | 109.4° | 109.6° |
C3 | C4 | H4 | 109.5° | 109.5° |
O4 | C4 | H4 | 109.0° | 109.5° |
C4 | O4 | HO4 | 109.5° | 114.0° |
O3 | C3 | H3 | 108.1° | 109.5° |
C3 | O3 | HO3 | 109.5° | 114.0° |
H61 | C6 | H62 | 109.5° | 109.4° |
H1'1 | C1' | H1'2 | 109.5° | 109.5° |
H6'1 | C6' | H6'2 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O6' | C6' | C5' | H6'1 | 120.2° | 120.0° |
O6' | C6' | C5' | H6'2 | 120.2° | 120.0° |
O6' | C6' | C5' | O2' | 56.9° | 70.8° |
O6' | C6' | C5' | C4' | 175.3° | 175.0° |
O6' | C6' | C5' | H5' | 61.1° | 52.1° |
O6' | C6' | H6'1 | H6'2 | 119.4° | 120.0° |
C6' | C5' | O2' | C4' | 123.5° | 118.6° |
C6' | C5' | O2' | H5' | 118.1° | 122.9° |
C6' | C5' | O2' | C2' | 124.9° | 158.7° |
C6' | C5' | C4' | H5' | 124.0° | 122.9° |
C6' | C5' | C4' | C3' | 142.7° | 155.7° |
C6' | C5' | C4' | O4' | 96.4° | 86.1° |
C6' | C5' | C4' | H4' | 26.0° | 37.5° |
C5' | C6' | H6'1 | H6'2 | 119.5° | 120.0° |
C5' | C6' | O6' | HO6' | 180.0° | 180.0° |
O2' | C5' | C4' | H5' | 118.8° | 118.5° |
C5' | O2' | C2' | C1' | 140.6° | 93.0° |
C5' | O2' | C2' | O1 | 94.5° | 146.0° |
C5' | O2' | C2' | C3' | 23.4° | 26.5° |
O2' | C5' | C4' | C3' | 25.5° | 37.0° |
O2' | C5' | C4' | O4' | 146.3° | 155.2° |
O2' | C5' | C4' | H4' | 91.2° | 81.1° |
O2' | C5' | C6' | H6'1 | 63.3° | 169.2° |
O2' | C5' | C6' | H6'2 | 177.1° | 49.2° |
O2' | C2' | C1' | O1' | 52.8° | 53.2° |
C2' | O2' | C5' | C4' | 1.4° | 40.0° |
O2' | C2' | C1' | O1 | 123.7° | 120.9° |
O2' | C2' | C1' | C3' | 113.2° | 118.0° |
O2' | C2' | O1 | C1 | 51.4° | 65.8° |
O2' | C2' | O1 | C3' | 115.2° | 118.0° |
O2' | C2' | C3' | C4' | 38.5° | 2.1° |
O2' | C2' | C3' | O3' | 159.7° | 116.5° |
O2' | C2' | C1' | H1'1 | 173.3° | 173.2° |
O2' | C2' | C1' | H1'2 | 67.6° | 66.7° |
O2' | C2' | C3' | H3' | 77.6° | 120.9° |
C2' | O2' | C5' | H5' | 117.0° | 78.5° |
O1' | C1' | C2' | H1'1 | 120.5° | 120.0° |
O1' | C1' | C2' | H1'2 | 120.5° | 119.9° |
O1' | C1' | C2' | O1 | 176.6° | 67.7° |
O1' | C1' | C2' | C3' | 60.3° | 171.3° |
O1' | C1' | H1'1 | H1'2 | 118.5° | 120.0° |
C5' | C4' | C3' | C2' | 38.6° | 20.9° |
C5' | C4' | C3' | O4' | 119.1° | 118.2° |
C5' | C4' | C3' | H4' | 116.8° | 118.2° |
C5' | C4' | O4' | H4' | 121.8° | 123.6° |
C5' | C4' | C3' | O3' | 157.0° | 139.5° |
C5' | C4' | C3' | H3' | 77.4° | 97.9° |
C4' | C5' | C6' | H6'1 | 55.1° | 54.9° |
C4' | C5' | C6' | H6'2 | 64.6° | 65.0° |
C5' | C4' | O4' | HO4' | 180.0° | 67.3° |
O6 | C6 | C5 | O5 | 63.3° | 65.1° |
O6 | C6 | C5 | H61 | 120.9° | 120.0° |
O6 | C6 | C5 | H62 | 120.8° | 120.0° |
O6 | C6 | C5 | C4 | 58.0° | 175.0° |
O6 | C6 | C5 | H5 | 177.4° | 55.0° |
O6 | C6 | H61 | H62 | 117.4° | 120.0° |
O5 | C1 | C2 | O1 | 120.3° | 120.0° |
O5 | C1 | C2 | H1 | 120.5° | 120.0° |
O5 | C1 | O1 | H1 | 120.9° | 120.0° |
O5 | C1 | O1 | C2' | 103.3° | 69.0° |
C1 | O5 | C5 | C6 | 175.0° | 178.9° |
O5 | C1 | C2 | O2 | 176.8° | 177.5° |
O5 | C1 | C2 | C3 | 56.6° | 57.6° |
C1 | O5 | C5 | C4 | 54.3° | 61.2° |
O5 | C1 | C2 | H2 | 63.2° | 62.3° |
C1 | O5 | C5 | H5 | 65.9° | 58.8° |
C5 | O5 | C1 | C2 | 56.0° | 61.2° |
C5 | O5 | C1 | O1 | 63.9° | 58.9° |
O5 | C5 | C6 | C4 | 121.3° | 119.9° |
O5 | C5 | C6 | H5 | 119.3° | 120.0° |
O5 | C5 | C4 | H5 | 120.8° | 120.0° |
O5 | C5 | C4 | C3 | 53.6° | 57.6° |
O5 | C5 | C4 | O4 | 176.3° | 177.5° |
C5 | O5 | C1 | H1 | 175.4° | 178.9° |
O5 | C5 | C4 | H4 | 66.5° | 62.3° |
O5 | C5 | C6 | H61 | 175.8° | 174.9° |
O5 | C5 | C6 | H62 | 57.5° | 55.0° |
C1' | C2' | O1 | C1 | 69.5° | 55.2° |
C1' | C2' | O1 | C3' | 124.0° | 121.0° |
C1' | C2' | C3' | C4' | 152.9° | 117.4° |
C1' | C2' | C3' | O3' | 85.9° | 123.9° |
C2' | C1' | H1'1 | H1'2 | 118.5° | 120.0° |
C1' | C2' | C3' | H3' | 36.8° | 1.4° |
C2' | C1' | O1' | HO1' | 180.0° | 180.0° |
C2 | C1 | O1 | H1 | 118.4° | 120.0° |
C2 | C1 | O1 | C2' | 135.9° | 171.0° |
C1 | C2 | O2 | C3 | 120.2° | 119.7° |
C1 | C2 | O2 | H2 | 118.9° | 120.2° |
C1 | C2 | C3 | H2 | 119.2° | 119.9° |
C1 | C2 | C3 | C4 | 57.3° | 57.0° |
C1 | C2 | C3 | O3 | 178.5° | 176.8° |
C1 | C2 | C3 | H3 | 63.4° | 63.0° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
C1 | O1 | C2' | C3' | 166.6° | 176.2° |
O1 | C1 | C2 | O2 | 56.5° | 57.5° |
O1 | C1 | C2 | C3 | 63.7° | 62.4° |
O1 | C1 | C2 | H2 | 176.5° | 177.7° |
O1 | C2' | C3' | C4' | 81.3° | 121.6° |
O1 | C2' | C3' | O3' | 39.9° | 3.0° |
C2' | O1 | C1 | H1 | 17.5° | 51.0° |
O1 | C2' | C1' | H1'1 | 63.0° | 52.3° |
O1 | C2' | C1' | H1'2 | 56.1° | 172.4° |
O1 | C2' | C3' | H3' | 162.6° | 119.6° |
C2' | C3' | C4' | O3' | 118.4° | 118.7° |
C2' | C3' | C4' | H3' | 116.0° | 118.7° |
C2' | C3' | C4' | O4' | 157.7° | 139.1° |
C2' | C3' | O3' | H3' | 121.9° | 122.6° |
C3' | C2' | C1' | H1'1 | 60.1° | 68.7° |
C3' | C2' | C1' | H1'2 | 179.2° | 51.3° |
C2' | C3' | C4' | H4' | 78.2° | 97.3° |
C2' | C3' | O3' | HO3' | 180.0° | 180.0° |
C6 | C5 | C4 | H5 | 119.7° | 120.1° |
C6 | C5 | C4 | C3 | 173.1° | 177.6° |
C6 | C5 | C4 | O4 | 64.1° | 62.5° |
C6 | C5 | C4 | H4 | 53.0° | 57.7° |
C5 | C6 | H61 | H62 | 117.4° | 120.0° |
C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
O2 | C2 | C3 | H2 | 121.5° | 120.2° |
O2 | C2 | C3 | C4 | 176.7° | 176.9° |
O2 | C2 | C3 | O3 | 62.2° | 63.3° |
O2 | C2 | C1 | H1 | 62.8° | 62.5° |
O2 | C2 | C3 | H3 | 56.0° | 56.9° |
C2 | C3 | C4 | C5 | 56.1° | 57.0° |
C2 | C3 | C4 | O3 | 121.7° | 119.9° |
C2 | C3 | C4 | H3 | 120.3° | 119.9° |
C2 | C3 | C4 | O4 | 176.0° | 176.9° |
C2 | C3 | O3 | H3 | 118.4° | 120.2° |
C3 | C2 | C1 | H1 | 177.1° | 177.6° |
C2 | C3 | C4 | H4 | 63.0° | 63.0° |
C3 | C2 | O2 | HO2 | 59.8° | 179.6° |
C2 | C3 | O3 | HO3 | 180.0° | 60.0° |
C3' | C4' | O4' | H4' | 123.5° | 123.7° |
C4' | C3' | O3' | H3' | 124.9° | 122.7° |
C3' | C4' | C5' | H5' | 93.3° | 81.5° |
C4' | C3' | O3' | HO3' | 66.8° | 65.2° |
C3' | C4' | O4' | HO4' | 65.3° | 180.0° |
O4' | C4' | C3' | O3' | 83.9° | 102.2° |
O4' | C4' | C3' | H3' | 41.7° | 20.4° |
O4' | C4' | C5' | H5' | 27.6° | 36.8° |
C5 | C4 | C3 | O4 | 119.9° | 119.9° |
C5 | C4 | C3 | H4 | 119.1° | 120.0° |
C5 | C4 | O4 | H4 | 116.5° | 120.2° |
C5 | C4 | C3 | O3 | 177.8° | 176.9° |
C5 | C4 | C3 | H3 | 64.2° | 62.9° |
C4 | C5 | C6 | H61 | 62.9° | 55.0° |
C4 | C5 | C6 | H62 | 178.8° | 65.0° |
C5 | C4 | O4 | HO4 | 180.0° | 179.6° |
O3' | C3' | C4' | H4' | 40.2° | 21.4° |
C3 | C4 | O4 | H4 | 121.3° | 120.1° |
C4 | C3 | O3 | H3 | 118.8° | 120.2° |
C4 | C3 | C2 | H2 | 61.8° | 62.9° |
C3 | C4 | C5 | H5 | 67.2° | 62.3° |
C4 | C3 | O3 | HO3 | 57.2° | 179.5° |
C3 | C4 | O4 | HO4 | 57.8° | 60.0° |
O4 | C4 | C3 | O3 | 62.3° | 63.2° |
O4 | C4 | C3 | H3 | 55.7° | 57.0° |
O4 | C4 | C5 | H5 | 55.6° | 57.6° |
O3 | C3 | C2 | H2 | 59.3° | 56.9° |
O3 | C3 | C4 | H4 | 58.7° | 56.9° |
H1 | C1 | C2 | H2 | 57.3° | 57.7° |
H2 | C2 | C3 | H3 | 177.4° | 177.1° |
H2 | C2 | O2 | HO2 | 61.1° | 60.2° |
H3 | C3 | C4 | H4 | 176.7° | 177.1° |
H3 | C3 | O3 | HO3 | 61.6° | 60.3° |
H4 | C4 | C5 | H5 | 172.7° | 177.7° |
H4 | C4 | O4 | HO4 | 63.5° | 60.1° |
H5 | C5 | C6 | H61 | 56.5° | 65.1° |
H5 | C5 | C6 | H62 | 61.8° | 175.0° |
H61 | C6 | O6 | HO6 | 59.2° | 60.0° |
H62 | C6 | O6 | HO6 | 59.1° | 60.0° |
H1'1 | C1' | O1' | HO1' | 59.5° | 60.0° |
H1'2 | C1' | O1' | HO1' | 59.5° | 60.1° |
H3' | C3' | C4' | H4' | 165.8° | 144.0° |
H3' | C3' | O3' | HO3' | 58.1° | 57.5° |
H4' | C4' | C5' | H5' | 150.0° | 160.4° |
H4' | C4' | O4' | HO4' | 58.2° | 56.4° |
H5' | C5' | C6' | H6'1 | 178.7° | 68.0° |
H5' | C5' | C6' | H6'2 | 59.0° | 172.1° |
H6'1 | C6' | O6' | HO6' | 59.8° | 60.0° |
H6'2 | C6' | O6' | HO6' | 59.8° | 60.0° |