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PUA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PAO1Asing1.61Å1.53Å
PAO2Adoub1.48Å1.54Å
PAO5'sing1.61Å1.59Å
PAO3Asing1.61Å1.60Å
O1AH1Asing0.97Å0.95Å
O5'C5'sing1.43Å1.41Å
PBO1Bsing1.61Å1.48Å
PBO2Bdoub1.48Å1.48Å
PBO3Asing1.61Å1.59Å
PBO3sing1.61Å1.62Å
O1BH1Bsing0.97Å0.95Å
PGO1Gsing1.61Å1.53Å
PGO2Gsing1.61Å1.53Å
PGO3Gdoub1.48Å1.53Å
PGO3'sing1.61Å1.63Å
O1GH1Gsing0.97Å0.95Å
O2GH2Gsing0.97Å0.95Å
N9AC4Asing1.37Å1.37ÅAromatic
N9AC8Asing1.36Å1.38ÅAromatic
N9AC1'sing1.47Å1.46Å
C4AN3Asing1.33Å1.35ÅAromatic
C4AC5Adoub1.40Å1.39ÅAromatic
N3AC2Adoub1.32Å1.34ÅAromatic
C2AN1Asing1.32Å1.35ÅAromatic
C2AH2Asing1.08Å1.10Å
N1AC6Adoub1.33Å1.36ÅAromatic
C6AN6Asing1.38Å1.34Å
C6AC5Asing1.40Å1.42ÅAromatic
N6AH6A1sing0.97Å1.02Å
N6AH6A2sing0.97Å1.02Å
C5AN7Asing1.35Å1.39ÅAromatic
N7AC8Adoub1.30Å1.31ÅAromatic
C8AH8Asing1.08Å1.10Å
C5'C4'sing1.53Å1.51Å
C5'H5'1sing1.09Å1.11Å
C5'H5'2sing1.09Å1.11Å
C4'O4'sing1.44Å1.46Å
C4'C3'sing1.54Å1.53Å
C4'H4'sing1.09Å1.11Å
O4'C1'sing1.44Å1.41Å
C1'C2'sing1.54Å1.53Å
C1'H1'sing1.09Å1.11Å
C2'O2'sing1.43Å1.41Å
C2'C3'sing1.55Å1.52Å
C2'H2'sing1.09Å1.12Å
O2'HO2'sing0.97Å0.95Å
C3'O3'sing1.43Å1.44Å
C3'H3'sing1.09Å1.11Å
O5C5sing1.43Å1.44Å
O5PDsing1.61Å1.63Å
C5C4sing1.53Å1.52Å
C5H51sing1.09Å1.11Å
C5H52sing1.09Å1.12Å
C4O4sing1.45Å1.45Å
C4C3sing1.54Å1.53Å
C4H4sing1.09Å1.11Å
O4C1sing1.44Å1.42Å
C1C2sing1.54Å1.52Å
C1N1Using1.46Å1.47Å
C1H1sing1.09Å1.11Å
C2C3sing1.54Å1.52Å
C2H21sing1.09Å1.11Å
C2H22sing1.09Å1.12Å
C3O3sing1.43Å1.44Å
C3H3sing1.09Å1.11Å
PDO1Dsing1.61Å1.52Å
PDO2Dsing1.61Å1.53Å
PDO3Ddoub1.48Å1.53Å
O1DHD1sing0.97Å0.95Å
O2DHD2sing0.97Å0.95Å
N1UC6Using1.37Å1.40Å
N1UC2Using1.34Å1.40Å
C6UC5Udoub1.35Å1.35Å
C6UH6Using1.08Å1.10Å
C2UO2Udoub1.22Å1.21Å
C2UN3Using1.35Å1.38Å
N3UC4Using1.35Å1.40Å
N3UH3Using0.97Å1.02Å
C4UO4Udoub1.22Å1.24Å
C4UC5Using1.42Å1.45Å
C5UH5Using1.08Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1APAO2A115.7°109.4°
O1APAO5'107.0°109.5°
O1APAO3A107.7°109.4°
PAO1AH1A115.7°106.8°
O2APAO5'109.7°109.4°
O2APAO3A110.8°109.5°
O5'PAO3A105.4°109.5°
PAO5'C5'119.3°106.9°
PAO3APB135.4°106.8°
O5'C5'C4'110.7°109.5°
O5'C5'H5'1111.7°109.5°
O5'C5'H5'2111.7°109.4°
O1BPBO2B118.8°109.5°
O1BPBO3A106.8°109.5°
O1BPBO3112.0°109.4°
PBO1BH1B118.8°106.8°
O2BPBO3A108.9°109.5°
O2BPBO3105.9°109.5°
O3APBO3103.4°109.5°
PBO3C3119.7°106.8°
O1GPGO2G112.8°109.5°
O1GPGO3G112.3°109.4°
O1GPGO3'106.4°109.5°
PGO1GH1G112.8°106.9°
O2GPGO3G114.2°109.4°
O2GPGO3'104.3°109.5°
PGO2GH2G112.7°106.8°
O3GPGO3'106.1°109.5°
PGO3'C3'124.3°106.8°
C4AN9AC8A106.0°107.4°
C4AN9AC1'125.7°126.3°
N9AC4AN3A126.9°134.9°
N9AC4AC5A105.7°106.0°
C8AN9AC1'128.3°126.3°
N9AC8AN7A113.9°110.0°
N9AC8AH8A125.3°125.0°
N9AC1'O4'109.0°110.3°
N9AC1'C2'116.2°110.4°
N9AC1'H1'103.5°110.3°
N3AC4AC5A127.4°119.1°
C4AN3AC2A110.8°120.7°
C4AC5AC6A116.4°118.1°
C4AC5AN7A110.8°107.1°
N3AC2AN1A128.8°122.4°
N3AC2AH2A114.9°118.8°
N1AC2AH2A116.4°118.7°
C2AN1AC6A118.8°121.2°
N1AC6AN6A118.6°120.8°
N1AC6AC5A117.7°118.5°
N6AC6AC5A123.7°120.8°
C6AN6AH6A1118.6°120.0°
C6AN6AH6A2108.9°120.0°
C6AC5AN7A132.8°134.7°
H6A1N6AH6A2109.0°120.1°
C5AN7AC8A103.6°109.4°
N7AC8AH8A120.8°125.0°
C4'C5'H5'1111.7°109.4°
C4'C5'H5'2111.7°109.4°
C5'C4'O4'111.3°110.4°
C5'C4'C3'115.7°110.5°
C5'C4'H4'102.7°110.3°
H5'1C5'H5'298.7°109.5°
O4'C4'C3'106.2°104.8°
O4'C4'H4'112.9°110.4°
C4'O4'C1'108.6°105.3°
C3'C4'H4'108.2°110.4°
C4'C3'C2'102.5°104.1°
C4'C3'O3'109.9°110.6°
C4'C3'H3'112.6°110.5°
O4'C1'C2'103.5°104.9°
O4'C1'H1'116.2°110.4°
C2'C1'H1'108.9°110.4°
C1'C2'O2'110.4°110.8°
C1'C2'C3'100.8°103.9°
C1'C2'H2'115.6°110.4°
O2'C2'C3'112.8°110.5°
O2'C2'H2'104.3°110.5°
C2'O2'HO2'110.4°106.8°
C3'C2'H2'113.3°110.5°
C2'C3'O3'106.1°110.5°
C2'C3'H3'116.0°110.5°
O3'C3'H3'109.4°110.4°
C5O5PD121.7°106.8°
O5C5C4110.0°109.5°
O5C5H51112.0°109.5°
O5C5H52112.0°109.4°
O5PDO1D104.3°109.5°
O5PDO2D105.2°109.5°
O5PDO3D107.0°109.5°
C4C5H51112.0°109.5°
C4C5H52112.0°109.5°
C5C4O4109.2°110.3°
C5C4C3114.0°110.6°
C5C4H4105.5°110.3°
H51C5H5298.4°109.5°
O4C4C3106.0°104.7°
O4C4H4113.6°110.4°
C4O4C1110.7°105.3°
C3C4H4108.8°110.3°
C4C3C2103.4°104.1°
C4C3O3112.3°110.5°
C4C3H3112.2°110.5°
O4C1C2106.1°104.8°
O4C1N1U108.4°110.5°
O4C1H1113.5°110.3°
C2C1N1U112.7°110.4°
C2C1H1109.2°110.4°
C1C2C3103.4°104.1°
C1C2H21114.5°110.5°
C1C2H22114.5°110.5°
N1UC1H1107.0°110.3°
C1N1UC6U121.3°119.7°
C1N1UC2U117.8°119.7°
C3C2H21114.5°110.5°
C3C2H22114.5°110.5°
C2C3O3111.3°110.5°
C2C3H3113.3°110.6°
H21C2H2296.0°110.5°
O3C3H3104.6°110.4°
O1DPDO2D113.4°109.4°
O1DPDO3D112.0°109.5°
PDO1DHD1104.3°106.8°
O2DPDO3D114.0°109.5°
PDO2DHD2105.2°106.8°
C6UN1UC2U120.9°120.6°
N1UC6UC5U122.8°119.7°
N1UC6UH6U120.7°120.1°
N1UC2UO2U123.2°119.5°
N1UC2UN3U114.9°120.9°
C5UC6UH6U116.5°120.2°
C6UC5UC4U119.3°119.1°
C6UC5UH5U116.9°120.5°
O2UC2UN3U121.9°119.5°
C2UN3UC4U127.2°120.3°
C2UN3UH3U115.4°119.8°
C4UN3UH3U117.4°119.9°
N3UC4UO4U119.3°120.3°
N3UC4UC5U114.8°119.4°
O4UC4UC5U125.8°120.3°
C4UC5UH5U123.8°120.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1APAO2AO5'121.1°119.9°
O1APAO2AO3A123.0°120.0°
O1APAO5'O3A114.4°120.0°
O1APAO5'C5'42.9°59.9°
O1APAO3APB168.7°60.0°
O2APAO5'O3A119.3°120.1°
O2APAO1AH1A180.0°179.9°
O2APAO5'C5'169.2°60.0°
O2APAO3APB41.2°59.9°
O5'PAO1AH1A57.4°60.0°
O5'PAO3APB77.4°180.0°
PAO5'C5'C4'121.1°180.0°
PAO5'C5'H5'14.2°60.0°
PAO5'C5'H5'2113.7°60.0°
O3APAO1AH1A55.4°60.1°
O3APAO5'C5'71.5°179.9°
PAO3APBO1B34.9°60.1°
PAO3APBO2B164.3°60.0°
PAO3APBO383.4°180.0°
O5'C5'C4'H5'1125.3°120.0°
O5'C5'C4'H5'2125.2°119.9°
O5'C5'H5'1H5'2117.6°120.0°
O5'C5'C4'O4'73.5°61.4°
O5'C5'C4'C3'47.8°176.9°
O5'C5'C4'H4'165.5°60.8°
O1BPBO2BO3A122.4°120.0°
O1BPBO2BO3127.0°120.0°
O1BPBO3AO3118.3°119.9°
O1BPBO3C32.9°60.0°
O2BPBO3AO3112.3°120.0°
O2BPBO1BH1B180.0°180.0°
O2BPBO3C3128.0°60.0°
O3APBO1BH1B56.5°59.9°
O3APBO3C3117.5°180.0°
O3PBO1BH1B56.0°60.0°
PBO3C3C4179.3°122.0°
PBO3C3C263.8°123.3°
PBO3C3H358.8°0.6°
O1GPGO2GO3G129.7°119.9°
O1GPGO2GO3'115.0°120.0°
O1GPGO3GO3'115.8°120.0°
O1GPGO2GH2G179.9°60.0°
O1GPGO3'C3'51.2°180.0°
O2GPGO3GO3'114.3°120.0°
O2GPGO1GH1G179.9°60.0°
O2GPGO3'C3'170.6°60.0°
O3GPGO1GH1G49.4°59.9°
O3GPGO2GH2G50.4°180.0°
O3GPGO3'C3'68.5°60.0°
O3'PGO1GH1G66.2°180.0°
O3'PGO2GH2G65.0°60.0°
PGO3'C3'C4'75.3°120.0°
PGO3'C3'C2'174.6°125.3°
PGO3'C3'H3'48.8°2.6°
C4AN9AC8AC1'179.1°180.0°
N9AC4AN3AC5A179.4°179.6°
N9AC4AN3AC2A179.4°180.0°
N9AC4AC5AC6A179.6°179.6°
N9AC4AC5AN7A0.2°0.5°
C4AN9AC8AN7A0.5°0.1°
C4AN9AC8AH8A179.5°180.0°
C4AN9AC1'O4'88.4°153.0°
C4AN9AC1'C2'28.0°91.6°
C4AN9AC1'H1'147.4°30.8°
C8AN9AC4AN3A179.9°180.0°
C8AN9AC4AC5A0.4°0.3°
N9AC8AN7AC5A0.4°0.3°
N9AC8AN7AH8A180.0°179.9°
C8AN9AC1'O4'92.6°27.0°
C8AN9AC1'C2'150.9°88.5°
C8AN9AC1'H1'31.6°149.2°
C1'N9AC4AN3A0.8°0.0°
C1'N9AC4AC5A178.7°179.7°
C1'N9AC8AN7A178.6°180.0°
C1'N9AC8AH8A1.4°0.0°
N9AC1'O4'C4'158.3°159.3°
N9AC1'O4'C2'124.3°118.8°
N9AC1'O4'H1'116.4°122.2°
N9AC1'C2'H1'116.4°122.2°
N9AC1'C2'O2'78.1°98.6°
N9AC1'C2'C3'162.4°142.7°
N9AC1'C2'H2'39.9°24.2°
C4AN3AC2AN1A0.2°0.1°
C4AN3AC2AH2A179.9°180.0°
N3AC4AC5AC6A0.1°0.7°
N3AC4AC5AN7A179.7°179.8°
C5AC4AN3AC2A0.0°0.4°
C4AC5AC6AN1A0.0°0.6°
C4AC5AC6AN6A179.9°179.7°
C4AC5AC6AN7A179.7°178.8°
C4AC5AN7AC8A0.1°0.5°
N3AC2AN1AH2A180.0°180.0°
N3AC2AN1AC6A0.3°0.0°
C2AN1AC6AN6A179.9°180.0°
C2AN1AC6AC5A0.1°0.3°
H2AC2AN1AC6A179.8°180.0°
N1AC6AN6AC5A180.0°179.7°
N1AC6AN6AH6A1180.0°0.0°
N1AC6AN6AH6A254.7°179.7°
N1AC6AC5AN7A179.7°179.5°
C6AN6AH6A1H6A2125.3°179.6°
N6AC6AC5AN7A0.3°0.9°
C5AC6AN6AH6A10.0°179.7°
C5AC6AN6AH6A2125.4°0.7°
C6AC5AN7AC8A179.8°179.4°
C5AN7AC8AH8A179.6°179.7°
C4'C5'H5'1H5'2117.7°120.0°
C5'C4'O4'C3'126.7°119.0°
C5'C4'O4'H4'114.9°122.2°
C5'C4'C3'H4'114.6°122.3°
C5'C4'O4'C1'137.8°159.5°
C5'C4'C3'C2'107.7°143.0°
C5'C4'C3'O3'139.9°98.3°
C5'C4'C3'H3'17.7°24.2°
H5'1C5'C4'O4'161.3°178.6°
H5'1C5'C4'C3'77.5°63.1°
H5'1C5'C4'H4'40.2°59.2°
H5'2C5'C4'O4'51.8°58.5°
H5'2C5'C4'C3'173.0°56.9°
H5'2C5'C4'H4'69.3°179.2°
O4'C4'C3'H4'121.4°118.8°
C4'O4'C1'C2'34.0°40.5°
C4'O4'C1'H1'85.3°78.5°
O4'C4'C3'C2'16.3°24.1°
O4'C4'C3'O3'96.1°142.8°
O4'C4'C3'H3'141.7°94.7°
C3'C4'O4'C1'11.1°40.5°
C4'C3'C2'C1'35.1°0.1°
C4'C3'C2'O2'152.8°118.8°
C4'C3'C2'O3'115.3°118.8°
C4'C3'C2'H3'123.1°118.7°
C4'C3'C2'H2'89.0°118.6°
C4'C3'O3'H3'124.1°122.6°
H4'C4'O4'C1'107.3°78.3°
H4'C4'C3'C2'137.8°94.8°
H4'C4'C3'O3'25.3°24.0°
H4'C4'C3'H3'96.9°146.5°
O4'C1'C2'H1'124.2°118.9°
O4'C1'C2'O2'162.4°142.6°
O4'C1'C2'C3'43.0°23.9°
O4'C1'C2'H2'79.5°94.7°
C1'C2'O2'C3'111.9°114.6°
C1'C2'O2'H2'124.7°122.7°
C1'C2'C3'H2'124.1°118.5°
C1'C2'O2'HO2'180.0°65.3°
C1'C2'C3'O3'80.2°118.8°
C1'C2'C3'H3'158.2°118.6°
H1'C1'C2'O2'38.2°23.7°
H1'C1'C2'C3'81.2°95.0°
H1'C1'C2'H2'156.3°146.4°
O2'C2'C3'H2'118.2°122.6°
O2'C2'C3'O3'37.5°0.1°
O2'C2'C3'H3'84.1°122.5°
C3'C2'O2'HO2'68.1°179.9°
C2'C3'O3'H3'125.8°122.6°
H2'C2'O2'HO2'55.3°57.4°
H2'C2'C3'O3'155.7°122.7°
H2'C2'C3'H3'34.1°0.1°
O5C5C4H51125.3°120.0°
O5C5C4H52125.2°119.9°
O5C5H51H52117.9°119.9°
O5C5C4O459.7°61.4°
O5C5C4C358.6°176.8°
O5C5C4H4177.8°60.8°
C5O5PDO1D83.0°180.0°
C5O5PDO2D157.4°60.0°
C5O5PDO3D35.8°60.0°
PDO5C5C4149.7°180.0°
PDO5C5H5124.4°60.0°
PDO5C5H5285.0°60.0°
O5PDO1DO2D113.9°120.0°
O5PDO1DO3D115.3°120.0°
O5PDO2DO3D116.9°120.0°
O5PDO1DHD1180.0°180.0°
O5PDO2DHD2179.9°60.0°
C4C5H51H52117.9°120.1°
C5C4O4C3123.2°119.1°
C5C4O4H4117.4°122.2°
C5C4C3H4117.4°122.3°
C5C4O4C1119.5°159.4°
C5C4C3C298.1°142.7°
C5C4C3O3141.9°98.6°
C5C4C3H324.3°24.0°
H51C5C4O4175.0°178.6°
H51C5C4C366.7°63.2°
H51C5C4H452.6°59.2°
H52C5C4O465.5°58.5°
H52C5C4C3176.2°56.9°
H52C5C4H456.9°179.2°
O4C4C3H4122.5°118.8°
C4O4C1C216.4°40.4°
C4O4C1N1U137.7°159.3°
C4O4C1H1103.6°78.4°
O4C4C3C222.1°23.9°
O4C4C3O398.0°142.6°
O4C4C3H3144.5°94.9°
C3C4O4C13.7°40.4°
C4C3C2C131.2°0.0°
C4C3C2O3120.8°118.7°
C4C3C2H3121.7°118.7°
C4C3C2H21156.4°118.6°
C4C3C2H2294.1°118.7°
C4C3O3H3121.9°122.6°
H4C4O4C1123.1°78.4°
H4C4C3C2144.6°94.9°
H4C4C3O324.5°23.8°
H4C4C3H393.0°146.3°
O4C1C2N1U118.5°118.9°
O4C1C2H1122.7°118.8°
O4C1N1UH1122.8°122.3°
O4C1C2C329.8°23.9°
O4C1C2H21155.1°94.7°
O4C1C2H2295.5°142.6°
O4C1N1UC6U48.0°124.6°
O4C1N1UC2U133.3°55.2°
C2C1N1UH1120.1°122.3°
C1C2C3H21125.3°118.6°
C1C2C3H22125.2°118.7°
C1C2H21H22120.4°122.7°
C1C2C3O389.7°118.6°
C1C2C3H3152.8°118.8°
C2C1N1UC6U69.2°120.0°
C2C1N1UC2U109.6°60.3°
N1UC1C2C3148.3°142.9°
N1UC1C2H2186.4°24.2°
N1UC1C2H2223.1°98.5°
C1N1UC6UC2U178.7°179.7°
C1N1UC6UC5U177.0°179.9°
C1N1UC6UH6U2.9°0.0°
C1N1UC2UO2U2.5°0.3°
C1N1UC2UN3U177.3°179.7°
H1C1C2C393.0°94.9°
H1C1C2H2132.3°146.5°
H1C1C2H22141.8°23.8°
H1C1N1UC6U170.7°2.3°
H1C1N1UC2U10.5°177.4°
C3C2H21H22120.4°122.6°
C2C3O3H3122.6°122.7°
H21C2C3O335.6°122.7°
H21C2C3H381.9°0.1°
H22C2C3O3145.1°0.0°
H22C2C3H327.6°122.5°
O1DPDO2DO3D129.7°120.0°
O1DPDO2DHD266.6°60.0°
O2DPDO1DHD166.0°60.0°
O3DPDO1DHD164.7°60.0°
O3DPDO2DHD263.1°180.0°
N1UC6UC5UH6U180.0°180.0°
C6UN1UC2UO2U178.7°180.0°
C6UN1UC2UN3U1.4°0.5°
N1UC6UC5UC4U0.4°0.1°
N1UC6UC5UH5U179.6°179.9°
C2UN1UC6UC5U1.7°0.2°
C2UN1UC6UH6U178.3°179.7°
N1UC2UO2UN3U179.9°179.4°
N1UC2UN3UC4U0.0°0.5°
N1UC2UN3UH3U180.0°179.7°
C6UC5UC4UN3U1.0°0.1°
C6UC5UC4UO4U175.2°180.0°
C6UC5UC4UH5U180.0°179.9°
H6UC6UC5UC4U179.6°179.9°
H6UC6UC5UH5U0.4°0.1°
O2UC2UN3UC4U179.9°180.0°
O2UC2UN3UH3U0.1°0.3°
C2UN3UC4UH3U180.0°179.8°
C2UN3UC4UO4U175.2°179.7°
C2UN3UC4UC5U1.2°0.2°
N3UC4UO4UC5U176.0°179.9°
N3UC4UC5UH5U179.1°180.0°
H3UN3UC4UO4U4.8°0.1°
H3UN3UC4UC5U178.8°180.0°
O4UC4UC5UH5U4.8°0.1°

221051

PDB entries from 2024-06-12

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