PRP

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	C2	sing	1.54Å	1.51Å
C1	O1	sing	1.43Å	1.46Å
C1	O4	sing	1.44Å	1.38Å
C1	H1	sing	1.09Å	1.12Å
C2	C3	sing	1.54Å	1.50Å
C2	O2	sing	1.43Å	1.44Å
C2	H2	sing	1.09Å	1.12Å
C3	C4	sing	1.54Å	1.49Å
C3	O3	sing	1.43Å	1.42Å
C3	H3	sing	1.09Å	1.11Å
C4	C5	sing	1.53Å	1.52Å
C4	O4	sing	1.45Å	1.45Å
C4	H4	sing	1.09Å	1.11Å
C5	O5	sing	1.43Å	1.41Å
C5	H51	sing	1.09Å	1.11Å
C5	H52	sing	1.09Å	1.12Å
O1	PA	sing	1.61Å	1.64Å
O2	HO2	sing	0.97Å	0.95Å
O3	HO3	sing	0.97Å	0.95Å
O5	P	sing	1.61Å	1.61Å
P	O1P	doub	1.48Å	1.48Å
P	O2P	sing	1.61Å	1.49Å
P	O3P	sing	1.61Å	1.50Å
O2P	HOP2	sing	0.97Å	0.95Å
O3P	HOP3	sing	0.97Å	0.95Å
PA	O1A	doub	1.48Å	1.51Å
PA	O2A	sing	1.61Å	1.48Å
PA	O3A	sing	1.61Å	1.52Å
O2A	HOA2	sing	0.97Å	0.95Å
O3A	PB	sing	1.61Å	1.52Å
PB	O1B	doub	1.48Å	1.44Å
PB	O2B	sing	1.61Å	1.45Å
PB	O3B	sing	1.61Å	1.48Å
O2B	HOB2	sing	0.97Å	0.95Å
O3B	HOB3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	C1	O1	113.6°	110.4°
C2	C1	O4	105.8°	104.8°
C2	C1	H1	108.4°	110.3°
C1	C2	C3	101.0°	104.1°
C1	C2	O2	112.6°	110.6°
C1	C2	H2	112.4°	110.5°
O1	C1	O4	106.7°	110.5°
O1	C1	H1	107.5°	110.3°
C1	O1	PA	127.5°	106.8°
O4	C1	H1	115.1°	110.3°
C1	O4	C4	108.6°	105.4°
C3	C2	O2	107.7°	110.5°
C3	C2	H2	117.0°	110.5°
C2	C3	C4	102.5°	104.2°
C2	C3	O3	114.9°	110.5°
C2	C3	H3	109.4°	110.5°
O2	C2	H2	106.2°	110.4°
C2	O2	HO2	112.6°	106.9°
C4	C3	O3	105.5°	110.5°
C4	C3	H3	118.2°	110.5°
C3	C4	C5	105.3°	110.7°
C3	C4	O4	106.9°	104.7°
C3	C4	H4	114.3°	110.3°
O3	C3	H3	106.6°	110.4°
C3	O3	HO3	114.9°	106.8°
C5	C4	O4	111.0°	110.4°
C5	C4	H4	110.5°	110.4°
C4	C5	O5	110.5°	109.5°
C4	C5	H51	111.9°	109.4°
C4	C5	H52	111.8°	109.5°
O4	C4	H4	108.9°	110.3°
O5	C5	H51	111.9°	109.4°
O5	C5	H52	111.9°	109.5°
C5	O5	P	123.6°	106.8°
H51	C5	H52	98.5°	109.5°
O1	PA	O1A	102.4°	109.5°
O1	PA	O2A	107.8°	109.5°
O1	PA	O3A	102.0°	109.5°
O5	P	O1P	107.8°	109.5°
O5	P	O2P	109.6°	109.5°
O5	P	O3P	96.5°	109.5°
O1P	P	O2P	111.6°	109.5°
O1P	P	O3P	116.0°	109.4°
O2P	P	O3P	114.0°	109.5°
P	O2P	HOP2	109.5°	106.8°
P	O3P	HOP3	96.5°	106.8°
O1A	PA	O2A	114.1°	109.5°
O1A	PA	O3A	114.4°	109.5°
O2A	PA	O3A	114.4°	109.4°
PA	O2A	HOA2	107.8°	106.8°
PA	O3A	PB	129.6°	106.8°
O3A	PB	O1B	111.6°	109.4°
O3A	PB	O2B	109.8°	109.5°
O3A	PB	O3B	112.7°	109.5°
O1B	PB	O2B	109.0°	109.5°
O1B	PB	O3B	108.8°	109.5°
O2B	PB	O3B	104.7°	109.5°
PB	O2B	HOB2	109.8°	106.8°
PB	O3B	HOB3	112.7°	106.9°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	C1	O1	O4	116.1°	115.5°
C2	C1	O1	H1	119.9°	122.2°
C2	C1	O4	H1	119.6°	118.8°
C1	C2	C3	O2	118.2°	118.8°
C1	C2	C3	H2	122.3°	118.7°
C1	C2	O2	H2	123.4°	122.7°
C1	C2	C3	C4	35.4°	0.1°
C1	C2	C3	O3	78.4°	118.6°
C1	C2	C3	H3	161.7°	118.8°
C2	C1	O4	C4	25.0°	40.4°
C2	C1	O1	PA	152.0°	150.0°
C1	C2	O2	HO2	179.9°	65.3°
O1	C1	O4	H1	119.1°	122.2°
O1	C1	C2	C3	78.7°	95.0°
O1	C1	C2	O2	36.0°	23.7°
O1	C1	C2	H2	155.9°	146.4°
O1	C1	O4	C4	96.3°	78.5°
C1	O1	PA	O1A	94.8°	60.0°
C1	O1	PA	O2A	25.8°	60.0°
C1	O1	PA	O3A	146.6°	179.9°
O4	C1	C2	C3	38.0°	24.0°
O4	C1	C2	O2	152.7°	142.7°
O4	C1	C2	H2	87.4°	94.6°
C1	O4	C4	C3	1.6°	40.3°
C1	O4	C4	C5	115.9°	159.5°
C1	O4	C4	H4	122.3°	78.3°
O4	C1	O1	PA	91.9°	94.5°
H1	C1	C2	C3	162.0°	142.8°
H1	C1	C2	O2	83.4°	98.5°
H1	C1	C2	H2	36.5°	24.2°
H1	C1	O4	C4	144.6°	159.2°
H1	C1	O1	PA	32.1°	27.7°
C3	C2	O2	H2	126.1°	122.6°
C2	C3	C4	O3	120.6°	118.7°
C2	C3	C4	H3	120.3°	118.7°
C2	C3	O3	H3	121.3°	122.6°
C2	C3	C4	C5	95.9°	142.7°
C2	C3	C4	O4	22.2°	23.8°
C2	C3	C4	H4	142.7°	94.9°
C3	C2	O2	HO2	69.6°	180.0°
C2	C3	O3	HO3	180.0°	63.4°
O2	C2	C3	C4	153.7°	118.9°
O2	C2	C3	O3	39.8°	0.1°
O2	C2	C3	H3	80.0°	122.4°
H2	C2	C3	C4	86.9°	118.5°
H2	C2	C3	O3	159.2°	122.7°
H2	C2	C3	H3	39.4°	0.1°
H2	C2	O2	HO2	56.5°	57.4°
C4	C3	O3	H3	126.5°	122.6°
C3	C4	C5	O4	115.3°	115.5°
C3	C4	C5	H4	123.8°	122.4°
C3	C4	O4	H4	123.9°	118.6°
C3	C4	C5	O5	170.8°	176.9°
C3	C4	C5	H51	63.8°	63.2°
C3	C4	C5	H52	45.6°	56.9°
C4	C3	O3	HO3	67.9°	178.2°
O3	C3	C4	C5	143.5°	98.6°
O3	C3	C4	O4	98.4°	142.5°
O3	C3	C4	H4	22.1°	23.9°
H3	C3	C4	C5	24.4°	24.0°
H3	C3	C4	O4	142.5°	95.0°
H3	C3	C4	H4	97.0°	146.4°
H3	C3	O3	HO3	58.7°	59.3°
C5	C4	O4	H4	121.8°	122.2°
C4	C5	O5	H51	125.3°	119.9°
C4	C5	O5	H52	125.3°	120.0°
C4	C5	H51	H52	117.7°	120.0°
C4	C5	O5	P	106.7°	180.0°
O4	C4	C5	O5	55.5°	61.5°
O4	C4	C5	H51	179.2°	178.6°
O4	C4	C5	H52	69.8°	58.6°
H4	C4	C5	O5	65.3°	60.7°
H4	C4	C5	H51	60.0°	59.2°
H4	C4	C5	H52	169.4°	179.2°
O5	C5	H51	H52	117.7°	120.0°
C5	O5	P	O1P	44.1°	59.9°
C5	O5	P	O2P	77.6°	180.0°
C5	O5	P	O3P	164.1°	60.0°
H51	C5	O5	P	18.6°	60.0°
H52	C5	O5	P	128.1°	60.0°
O1	PA	O1A	O2A	116.2°	120.0°
O1	PA	O1A	O3A	109.5°	120.1°
O1	PA	O2A	O3A	112.7°	120.0°
O1	PA	O2A	HOA2	180.0°	60.0°
O1	PA	O3A	PB	69.2°	180.0°
O5	P	O1P	O2P	120.4°	120.1°
O5	P	O1P	O3P	106.8°	120.0°
O5	P	O2P	O3P	106.8°	120.0°
O5	P	O2P	HOP2	180.0°	180.0°
O5	P	O3P	HOP3	180.0°	60.0°
O1P	P	O2P	O3P	133.9°	119.9°
O1P	P	O2P	HOP2	60.7°	60.0°
O1P	P	O3P	HOP3	66.5°	180.0°
O2P	P	O3P	HOP3	65.2°	60.0°
O3P	P	O2P	HOP2	73.2°	60.0°
O1A	PA	O2A	O3A	134.3°	120.1°
O1A	PA	O2A	HOA2	67.0°	180.0°
O1A	PA	O3A	PB	178.9°	59.9°
O2A	PA	O3A	PB	46.9°	60.1°
O3A	PA	O2A	HOA2	67.3°	60.0°
PA	O3A	PB	O1B	34.0°	60.1°
PA	O3A	PB	O2B	154.9°	179.9°
PA	O3A	PB	O3B	88.8°	59.9°
O3A	PB	O1B	O2B	121.4°	120.0°
O3A	PB	O1B	O3B	125.0°	120.0°
O3A	PB	O2B	O3B	121.3°	120.0°
O3A	PB	O2B	HOB2	180.0°	180.0°
O3A	PB	O3B	HOB3	180.0°	60.0°
O1B	PB	O2B	O3B	116.3°	120.1°
O1B	PB	O2B	HOB2	57.5°	60.0°
O1B	PB	O3B	HOB3	55.7°	179.9°
O2B	PB	O3B	HOB3	60.7°	60.0°
O3B	PB	O2B	HOB2	58.8°	60.0°

Definition date:	1999-07-08
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	1TC2