NOC
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C6' | O6' | sing | 1.43Å | 1.47Å | |
C6' | C4' | sing | 1.53Å | 1.42Å | |
C6' | H6'1 | sing | 1.09Å | 1.12Å | |
C6' | H6'2 | sing | 1.09Å | 1.12Å | |
O6' | HO6' | sing | 0.97Å | 0.95Å | |
C5' | C4' | sing | 1.54Å | 1.38Å | |
C5' | C1' | sing | 1.54Å | 1.51Å | |
C5' | H5'1 | sing | 1.09Å | 1.12Å | |
C5' | H5'2 | sing | 1.09Å | 1.12Å | |
C4' | C3' | sing | 1.54Å | 1.47Å | |
C4' | HC4' | sing | 1.09Å | 1.12Å | |
C3' | O3' | sing | 1.43Å | 1.21Å | |
C3' | C2' | sing | 1.55Å | 1.50Å | |
C3' | HC3' | sing | 1.09Å | 1.12Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C2' | O2' | sing | 1.43Å | 1.42Å | |
C2' | C1' | sing | 1.55Å | 1.58Å | |
C2' | HC2' | sing | 1.09Å | 1.11Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C1' | N9 | sing | 1.46Å | 1.45Å | |
C1' | HC1' | sing | 1.09Å | 1.12Å | |
N9 | C8 | sing | 1.36Å | 1.39Å | Aromatic |
N9 | C4 | sing | 1.37Å | 1.34Å | Aromatic |
C8 | N7 | doub | 1.30Å | 1.29Å | Aromatic |
C8 | HC8 | sing | 1.08Å | 1.10Å | |
N7 | C5 | sing | 1.35Å | 1.40Å | Aromatic |
C5 | C6 | doub | 1.41Å | 1.44Å | Aromatic |
C5 | C4 | sing | 1.41Å | 1.43Å | Aromatic |
C6 | N6 | sing | 1.38Å | 1.37Å | |
C6 | N1 | sing | 1.33Å | 1.40Å | Aromatic |
N6 | HN61 | sing | 0.97Å | 1.02Å | |
N6 | HN62 | sing | 0.97Å | 1.02Å | |
N1 | C2 | doub | 1.32Å | 1.32Å | Aromatic |
C2 | N3 | sing | 1.32Å | 1.35Å | Aromatic |
C2 | HC2 | sing | 1.08Å | 1.10Å | |
N3 | C4 | doub | 1.33Å | 1.39Å | Aromatic |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O6' | C6' | C4' | 109.2° | 109.5° |
O6' | C6' | H6'1 | 112.3° | 109.4° |
O6' | C6' | H6'2 | 112.3° | 109.5° |
C6' | O6' | HO6' | 109.2° | 106.8° |
C4' | C6' | H6'1 | 112.3° | 109.5° |
C4' | C6' | H6'2 | 112.3° | 109.5° |
C6' | C4' | C5' | 123.7° | 110.0° |
C6' | C4' | C3' | 124.0° | 110.1° |
C6' | C4' | HC4' | 37.7° | 110.1° |
H6'1 | C6' | H6'2 | 98.1° | 109.5° |
C4' | C5' | C1' | 109.8° | 106.6° |
C4' | C5' | H5'1 | 112.1° | 110.0° |
C4' | C5' | H5'2 | 112.1° | 110.0° |
C5' | C4' | C3' | 112.0° | 106.6° |
C5' | C4' | HC4' | 119.0° | 110.1° |
C1' | C5' | H5'1 | 112.1° | 110.0° |
C1' | C5' | H5'2 | 112.1° | 110.0° |
C5' | C1' | C2' | 100.0° | 104.3° |
C5' | C1' | N9 | 117.1° | 110.5° |
C5' | C1' | HC1' | 116.2° | 110.5° |
H5'1 | C5' | H5'2 | 98.3° | 110.1° |
C3' | C4' | HC4' | 116.8° | 110.0° |
C4' | C3' | O3' | 128.8° | 110.5° |
C4' | C3' | C2' | 102.8° | 104.3° |
C4' | C3' | HC3' | 107.7° | 110.5° |
O3' | C3' | C2' | 121.8° | 110.7° |
O3' | C3' | HC3' | 72.1° | 110.4° |
C3' | O3' | HO3' | 128.8° | 106.8° |
C2' | C3' | HC3' | 120.1° | 110.4° |
C3' | C2' | O2' | 108.3° | 110.8° |
C3' | C2' | C1' | 105.1° | 102.7° |
C3' | C2' | HC2' | 114.4° | 110.7° |
O2' | C2' | C1' | 113.3° | 111.1° |
O2' | C2' | HC2' | 106.4° | 110.6° |
C2' | O2' | HO2' | 108.3° | 106.8° |
C1' | C2' | HC2' | 109.5° | 110.7° |
C2' | C1' | N9 | 121.3° | 110.5° |
C2' | C1' | HC1' | 111.5° | 110.5° |
N9 | C1' | HC1' | 91.7° | 110.4° |
C1' | N9 | C8 | 127.2° | 126.3° |
C1' | N9 | C4 | 125.2° | 126.3° |
C8 | N9 | C4 | 107.6° | 107.5° |
N9 | C8 | N7 | 112.6° | 109.9° |
N9 | C8 | HC8 | 127.1° | 125.0° |
N9 | C4 | C5 | 105.6° | 106.0° |
N9 | C4 | N3 | 128.6° | 135.0° |
N7 | C8 | HC8 | 120.3° | 125.1° |
C8 | N7 | C5 | 105.9° | 109.5° |
N7 | C5 | C6 | 135.1° | 134.7° |
N7 | C5 | C4 | 108.3° | 107.2° |
C6 | C5 | C4 | 116.6° | 118.1° |
C5 | C6 | N6 | 122.8° | 120.7° |
C5 | C6 | N1 | 115.6° | 118.5° |
C5 | C4 | N3 | 125.8° | 119.1° |
N6 | C6 | N1 | 121.6° | 120.8° |
C6 | N6 | HN61 | 107.4° | 120.0° |
C6 | N6 | HN62 | 122.8° | 120.0° |
C6 | N1 | C2 | 122.2° | 121.2° |
HN61 | N6 | HN62 | 107.5° | 119.9° |
N1 | C2 | N3 | 127.7° | 122.4° |
N1 | C2 | HC2 | 114.6° | 118.7° |
N3 | C2 | HC2 | 117.7° | 118.8° |
C2 | N3 | C4 | 112.1° | 120.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O6' | C6' | C4' | H6'1 | 125.3° | 119.9° |
O6' | C6' | C4' | H6'2 | 125.3° | 120.0° |
O6' | C6' | H6'1 | H6'2 | 118.3° | 120.0° |
O6' | C6' | C4' | C5' | 69.5° | 175.0° |
O6' | C6' | C4' | C3' | 104.4° | 67.9° |
O6' | C6' | C4' | HC4' | 164.6° | 53.5° |
C4' | C6' | H6'1 | H6'2 | 118.2° | 120.1° |
C4' | C6' | O6' | HO6' | 180.0° | 180.0° |
C6' | C4' | C5' | C3' | 174.6° | 119.3° |
C6' | C4' | C5' | HC4' | 44.1° | 121.5° |
C6' | C4' | C5' | C1' | 170.8° | 119.3° |
C6' | C4' | C5' | H5'1 | 63.9° | 121.4° |
C6' | C4' | C5' | H5'2 | 45.6° | 0.0° |
C6' | C4' | C3' | HC4' | 43.2° | 121.5° |
C6' | C4' | C3' | O3' | 17.4° | 98.3° |
C6' | C4' | C3' | C2' | 168.6° | 142.8° |
C6' | C4' | C3' | HC3' | 63.6° | 24.2° |
H6'1 | C6' | O6' | HO6' | 54.7° | 60.0° |
H6'1 | C6' | C4' | C5' | 165.2° | 55.1° |
H6'1 | C6' | C4' | C3' | 20.8° | 172.2° |
H6'1 | C6' | C4' | HC4' | 70.1° | 66.4° |
H6'2 | C6' | O6' | HO6' | 54.8° | 59.9° |
H6'2 | C6' | C4' | C5' | 55.8° | 65.0° |
H6'2 | C6' | C4' | C3' | 130.3° | 52.2° |
H6'2 | C6' | C4' | HC4' | 39.4° | 173.6° |
C4' | C5' | C1' | H5'1 | 125.3° | 119.3° |
C4' | C5' | C1' | H5'2 | 125.2° | 119.3° |
C4' | C5' | H5'1 | H5'2 | 118.0° | 121.4° |
C5' | C4' | C3' | HC4' | 142.2° | 119.3° |
C5' | C4' | C3' | O3' | 168.1° | 142.4° |
C5' | C4' | C3' | C2' | 16.9° | 23.5° |
C5' | C4' | C3' | HC3' | 111.0° | 95.1° |
C4' | C5' | C1' | C2' | 21.3° | 23.5° |
C4' | C5' | C1' | N9 | 154.3° | 142.3° |
C4' | C5' | C1' | HC1' | 98.9° | 95.2° |
C1' | C5' | H5'1 | H5'2 | 118.0° | 121.4° |
C1' | C5' | C4' | C3' | 3.7° | 0.0° |
C1' | C5' | C4' | HC4' | 145.0° | 119.2° |
C5' | C1' | C2' | C3' | 31.0° | 37.8° |
C5' | C1' | C2' | O2' | 149.1° | 156.2° |
C5' | C1' | C2' | N9 | 130.4° | 118.7° |
C5' | C1' | C2' | HC1' | 123.5° | 118.7° |
C5' | C1' | C2' | HC2' | 92.3° | 80.5° |
C5' | C1' | N9 | HC1' | 120.8° | 122.5° |
C5' | C1' | N9 | C8 | 65.9° | 58.2° |
C5' | C1' | N9 | C4 | 112.9° | 121.8° |
H5'1 | C5' | C4' | C3' | 121.6° | 119.3° |
H5'1 | C5' | C4' | HC4' | 19.8° | 0.1° |
H5'1 | C5' | C1' | C2' | 104.0° | 95.8° |
H5'1 | C5' | C1' | N9 | 29.0° | 23.0° |
H5'1 | C5' | C1' | HC1' | 135.8° | 145.5° |
H5'2 | C5' | C4' | C3' | 129.0° | 119.3° |
H5'2 | C5' | C4' | HC4' | 89.7° | 121.5° |
H5'2 | C5' | C1' | C2' | 146.5° | 142.8° |
H5'2 | C5' | C1' | N9 | 80.5° | 98.4° |
H5'2 | C5' | C1' | HC1' | 26.4° | 24.1° |
C4' | C3' | O3' | C2' | 146.5° | 115.0° |
C4' | C3' | O3' | HC3' | 98.7° | 122.5° |
C4' | C3' | C2' | HC3' | 119.6° | 118.6° |
C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
C4' | C3' | C2' | O2' | 150.8° | 156.5° |
C4' | C3' | C2' | C1' | 29.4° | 37.8° |
C4' | C3' | C2' | HC2' | 90.7° | 80.4° |
HC4' | C4' | C3' | O3' | 25.9° | 23.2° |
HC4' | C4' | C3' | C2' | 125.4° | 95.8° |
HC4' | C4' | C3' | HC3' | 106.8° | 145.6° |
O3' | C3' | C2' | HC3' | 86.6° | 122.6° |
O3' | C3' | C2' | O2' | 55.4° | 84.7° |
O3' | C3' | C2' | C1' | 176.8° | 156.6° |
O3' | C3' | C2' | HC2' | 63.1° | 38.4° |
C2' | C3' | O3' | HO3' | 33.5° | 65.0° |
C3' | C2' | O2' | C1' | 116.2° | 113.5° |
C3' | C2' | O2' | HC2' | 123.4° | 123.2° |
C3' | C2' | C1' | HC2' | 123.4° | 118.2° |
C3' | C2' | O2' | HO2' | 180.0° | 61.4° |
C3' | C2' | C1' | N9 | 161.5° | 156.5° |
C3' | C2' | C1' | HC1' | 92.5° | 80.9° |
HC3' | C3' | O3' | HO3' | 81.3° | 57.5° |
HC3' | C3' | C2' | O2' | 31.3° | 37.8° |
HC3' | C3' | C2' | C1' | 90.1° | 80.9° |
HC3' | C3' | C2' | HC2' | 149.7° | 161.0° |
O2' | C2' | C1' | HC2' | 118.6° | 123.3° |
O2' | C2' | C1' | N9 | 80.5° | 85.0° |
O2' | C2' | C1' | HC1' | 25.6° | 37.5° |
C1' | C2' | O2' | HO2' | 63.8° | 174.9° |
C2' | C1' | N9 | HC1' | 116.6° | 122.6° |
C2' | C1' | N9 | C8 | 56.7° | 56.7° |
C2' | C1' | N9 | C4 | 124.5° | 123.3° |
HC2' | C2' | O2' | HO2' | 56.6° | 61.8° |
HC2' | C2' | C1' | N9 | 38.1° | 38.3° |
HC2' | C2' | C1' | HC1' | 144.2° | 160.8° |
C1' | N9 | C8 | C4 | 178.9° | 180.0° |
C1' | N9 | C8 | N7 | 179.3° | 180.0° |
C1' | N9 | C8 | HC8 | 0.7° | 0.0° |
C1' | N9 | C4 | C5 | 179.6° | 179.7° |
C1' | N9 | C4 | N3 | 0.7° | 0.0° |
HC1' | C1' | N9 | C8 | 173.3° | 179.3° |
HC1' | C1' | N9 | C4 | 7.9° | 0.7° |
N9 | C8 | N7 | HC8 | 180.0° | 180.0° |
N9 | C8 | N7 | C5 | 0.1° | 0.2° |
C8 | N9 | C4 | C5 | 0.6° | 0.3° |
C8 | N9 | C4 | N3 | 179.7° | 180.0° |
C4 | N9 | C8 | N7 | 0.4° | 0.1° |
C4 | N9 | C8 | HC8 | 179.6° | 180.0° |
N9 | C4 | C5 | N7 | 0.7° | 0.4° |
N9 | C4 | C5 | C6 | 179.4° | 179.7° |
N9 | C4 | C5 | N3 | 179.7° | 179.7° |
N9 | C4 | N3 | C2 | 179.4° | 180.0° |
C8 | N7 | C5 | C6 | 179.6° | 179.5° |
C8 | N7 | C5 | C4 | 0.4° | 0.4° |
HC8 | C8 | N7 | C5 | 179.9° | 179.8° |
N7 | C5 | C6 | C4 | 180.0° | 179.0° |
N7 | C5 | C6 | N6 | 0.5° | 0.7° |
N7 | C5 | C6 | N1 | 179.7° | 179.6° |
N7 | C5 | C4 | N3 | 179.6° | 179.8° |
C5 | C6 | N6 | N1 | 179.8° | 179.7° |
C5 | C6 | N6 | HN61 | 54.7° | 179.7° |
C5 | C6 | N6 | HN62 | 180.0° | 0.6° |
C5 | C6 | N1 | C2 | 0.1° | 0.3° |
C6 | C5 | C4 | N3 | 0.4° | 0.6° |
C4 | C5 | C6 | N6 | 179.5° | 179.7° |
C4 | C5 | C6 | N1 | 0.3° | 0.6° |
C5 | C4 | N3 | C2 | 0.2° | 0.3° |
C6 | N6 | HN61 | HN62 | 134.0° | 179.7° |
N6 | C6 | N1 | C2 | 179.7° | 180.0° |
N1 | C6 | N6 | HN61 | 125.1° | 0.0° |
N1 | C6 | N6 | HN62 | 0.2° | 179.7° |
C6 | N1 | C2 | N3 | 0.1° | 0.0° |
C6 | N1 | C2 | HC2 | 179.9° | 180.0° |
N1 | C2 | N3 | HC2 | 180.0° | 180.0° |
N1 | C2 | N3 | C4 | 0.0° | 0.0° |
HC2 | C2 | N3 | C4 | 180.0° | 180.0° |