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KDG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1BC1sing1.43Å1.43Å
O1BH1Bsing0.97Å0.95Å
C1C2sing1.53Å1.51Å
C1H1C1sing1.09Å1.11Å
C1H1C2sing1.09Å1.11Å
C2O2sing1.43Å1.40Å
C2C3sing1.53Å1.55Å
C2H2sing1.09Å1.12Å
O2HAsing0.97Å0.95Å
C3O3sing1.43Å1.43Å
C3C4sing1.53Å1.53Å
C3H3sing1.09Å1.12Å
O3HBsing0.97Å0.95Å
C4C5sing1.51Å1.54Å
C4H4C1sing1.09Å1.11Å
C4H4C2sing1.09Å1.11Å
O5C5doub1.21Å1.23Å
C5C6sing1.49Å1.53Å
C6O6Asing1.35Å1.25Å
C6O6Bdoub1.21Å1.24Å
O6AH6Asing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1O1BH1B107.6°106.9°
O1BC1C2107.7°109.5°
O1BC1H1C1112.9°109.4°
O1BC1H1C2112.9°109.5°
C2C1H1C1112.9°109.5°
C2C1H1C2112.9°109.5°
C1C2O2107.8°109.5°
C1C2C3112.8°109.5°
C1C2H2108.5°109.5°
H1C1C1H1C297.6°109.4°
O2C2C3110.6°109.5°
O2C2H2108.5°109.4°
C2O2HA107.8°106.8°
C3C2H2108.5°109.4°
C2C3O3111.4°109.4°
C2C3C4111.1°109.5°
C2C3H3108.5°109.4°
O3C3C4108.6°109.5°
O3C3H3108.5°109.5°
C3O3HB111.4°106.8°
C4C3H3108.5°109.5°
C3C4C5115.1°109.5°
C3C4H4C1110.2°109.5°
C3C4H4C2110.2°109.5°
C5C4H4C1110.1°109.4°
C5C4H4C2110.2°109.4°
C4C5O5121.0°119.9°
C4C5C6119.5°120.1°
H4C1C4H4C2100.1°109.4°
O5C5C6119.5°120.0°
C5C6O6A119.7°120.0°
C5C6O6B117.9°120.0°
O6AC6O6B122.3°120.0°
C6O6AH6A119.8°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1BC1C2H1C1125.2°120.0°
O1BC1C2H1C2125.2°120.0°
O1BC1H1C1H1C2118.8°120.0°
O1BC1C2O269.1°60.0°
O1BC1C2C3168.4°180.0°
O1BC1C2H248.2°60.0°
H1BO1BC1C2180.0°180.0°
H1BO1BC1H1C154.7°60.0°
H1BO1BC1H1C254.8°60.0°
C2C1H1C1H1C2118.8°120.0°
C1C2O2C3123.8°120.0°
C1C2O2H2117.3°120.0°
C1C2C3H2120.2°120.0°
C1C2O2HA180.0°60.0°
C1C2C3O354.1°60.0°
C1C2C3C4175.5°180.0°
C1C2C3H365.3°60.0°
H1C1C1C2O256.1°60.0°
H1C1C1C2C366.3°60.0°
H1C1C1C2H2173.5°180.0°
H1C2C1C2O2165.7°180.0°
H1C2C1C2C343.2°60.0°
H1C2C1C2H277.0°60.0°
O2C2C3H2118.9°119.9°
O2C2C3O3175.0°180.0°
O2C2C3C463.7°59.9°
O2C2C3H355.6°60.1°
C3C2O2HA56.3°60.0°
C2C3O3C4122.7°120.0°
C2C3O3H3119.4°119.9°
C2C3C4H3119.2°120.0°
C2C3O3HB180.0°60.0°
C2C3C4C522.8°180.0°
C2C3C4H4C1148.0°60.0°
C2C3C4H4C2102.5°60.0°
H2C2O2HA62.6°180.0°
H2C2C3O366.1°60.0°
H2C2C3C455.2°60.0°
H2C2C3H3174.5°180.0°
O3C3C4H3117.8°120.0°
O3C3C4C5100.1°60.0°
O3C3C4H4C125.1°60.0°
O3C3C4H4C2134.6°180.0°
C4C3O3HB57.2°60.0°
C3C4C5H4C1125.2°120.0°
C3C4C5H4C2125.3°120.1°
C3C4H4C1H4C2116.0°120.1°
C3C4C5O559.1°0.0°
C3C4C5C6120.0°180.0°
H3C3O3HB60.6°180.0°
H3C3C4C5142.0°60.1°
H3C3C4H4C192.7°180.0°
H3C3C4H4C216.8°60.0°
C5C4H4C1H4C2116.0°119.9°
C4C5O5C6179.1°180.0°
C4C5C6O6A40.5°180.0°
C4C5C6O6B139.6°0.0°
H4C1C4C5O566.1°120.0°
H4C1C4C5C6114.8°60.0°
H4C2C4C5O5175.6°120.1°
H4C2C4C5C65.3°59.9°
O5C5C6O6A138.6°0.0°
O5C5C6O6B41.4°180.0°
C5C6O6AO6B180.0°180.0°
C5C6O6AH6A179.9°180.0°
O6BC6O6AH6A0.0°0.0°

218853

PDB entries from 2024-04-24

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