GMC

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C10	N6	sing	1.47Å	1.46Å
C10	H101	sing	1.09Å	1.12Å
C10	H102	sing	1.09Å	1.12Å
C10	H103	sing	1.09Å	1.12Å
N6	C9	sing	1.47Å	1.46Å
N6	C6	sing	1.38Å	1.40Å
C9	HC1	sing	1.09Å	1.11Å
C9	HC2	sing	1.09Å	1.12Å
C9	HC3	sing	1.09Å	1.12Å
C6	C5	doub	1.40Å	1.48Å	Aromatic
C6	N1	sing	1.33Å	1.34Å	Aromatic
C5	C4	sing	1.40Å	1.47Å	Aromatic
C5	N7	sing	1.35Å	1.34Å	Aromatic
C4	N3	doub	1.33Å	1.35Å	Aromatic
C4	N9	sing	1.37Å	1.33Å	Aromatic
N3	C2	sing	1.32Å	1.34Å	Aromatic
C2	N1	doub	1.32Å	1.34Å	Aromatic
C2	H2	sing	1.08Å	1.10Å
N7	C8	doub	1.30Å	1.35Å	Aromatic
C8	N9	sing	1.36Å	1.34Å	Aromatic
C8	H8	sing	1.08Å	1.10Å
N9	C1'	sing	1.46Å	1.47Å
C1'	O4'	sing	1.44Å	1.46Å
C1'	C2'	sing	1.54Å	1.52Å
C1'	H1'	sing	1.09Å	1.12Å
O4'	C4'	sing	1.44Å	1.43Å
C4'	C5'	sing	1.53Å	1.52Å
C4'	C3'	sing	1.54Å	1.52Å
C4'	H4'	sing	1.09Å	1.11Å
C5'	O5'	sing	1.43Å	1.42Å
C5'	H5'1	sing	1.09Å	1.11Å
C5'	H5'2	sing	1.09Å	1.11Å
O5'	H5'	sing	0.97Å	0.95Å
C2'	O2'	sing	1.43Å	1.42Å
C2'	C3'	sing	1.55Å	1.53Å
C2'	H2'	sing	1.09Å	1.11Å
O2'	HA	sing	0.97Å	0.95Å
C3'	N3'	sing	1.47Å	1.46Å
C3'	H3'	sing	1.09Å	1.11Å
N3'	H3'1	sing	1.01Å	1.02Å
N3'	H3'2	sing	1.01Å	1.02Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N6	C10	H101	119.2°	109.5°
N6	C10	H102	108.7°	109.4°
N6	C10	H103	108.7°	109.5°
C10	N6	C9	119.2°	106.7°
C10	N6	C6	118.0°	106.7°
H101	C10	H102	108.7°	109.5°
H101	C10	H103	108.7°	109.4°
H102	C10	H103	101.3°	109.5°
C9	N6	C6	122.9°	106.7°
N6	C9	HC1	119.2°	109.5°
N6	C9	HC2	108.7°	109.5°
N6	C9	HC3	108.7°	109.4°
N6	C6	C5	124.2°	120.8°
N6	C6	N1	118.2°	120.7°
HC1	C9	HC2	108.7°	109.5°
HC1	C9	HC3	108.7°	109.4°
HC2	C9	HC3	101.3°	109.4°
C5	C6	N1	117.6°	118.5°
C6	C5	C4	117.3°	118.2°
C6	C5	N7	136.2°	134.7°
C6	N1	C2	122.5°	121.2°
C4	C5	N7	106.6°	107.1°
C5	C4	N3	118.1°	119.0°
C5	C4	N9	106.5°	106.0°
C5	N7	C8	107.3°	109.5°
N3	C4	N9	135.3°	134.9°
C4	N3	C2	121.9°	120.6°
C4	N9	C8	108.2°	107.5°
C4	N9	C1'	130.7°	126.3°
N3	C2	N1	122.6°	122.5°
N3	C2	H2	118.7°	118.7°
N1	C2	H2	118.7°	118.8°
N7	C8	N9	111.4°	109.9°
N7	C8	H8	124.3°	125.0°
N9	C8	H8	124.3°	125.1°
C8	N9	C1'	121.1°	126.2°
N9	C1'	O4'	97.9°	110.4°
N9	C1'	C2'	132.1°	110.4°
N9	C1'	H1'	106.3°	110.3°
O4'	C1'	C2'	105.5°	104.9°
O4'	C1'	H1'	106.3°	110.3°
C1'	O4'	C4'	109.6°	105.3°
C2'	C1'	H1'	106.3°	110.4°
C1'	C2'	O2'	117.4°	110.8°
C1'	C2'	C3'	98.1°	104.0°
C1'	C2'	H2'	108.4°	110.5°
O4'	C4'	C5'	113.3°	110.4°
O4'	C4'	C3'	100.8°	104.8°
O4'	C4'	H4'	108.0°	110.4°
C5'	C4'	C3'	118.3°	110.5°
C5'	C4'	H4'	108.0°	110.3°
C4'	C5'	O5'	113.0°	109.5°
C4'	C5'	H5'1	110.9°	109.4°
C4'	C5'	H5'2	110.9°	109.5°
C3'	C4'	H4'	107.9°	110.4°
C4'	C3'	C2'	100.1°	104.1°
C4'	C3'	N3'	113.9°	110.5°
C4'	C3'	H3'	108.4°	110.5°
O5'	C5'	H5'1	110.9°	109.5°
O5'	C5'	H5'2	110.9°	109.5°
C5'	O5'	H5'	113.0°	106.8°
H5'1	C5'	H5'2	99.4°	109.5°
O2'	C2'	C3'	115.5°	110.5°
O2'	C2'	H2'	108.4°	110.5°
C2'	O2'	HA	117.5°	106.8°
C3'	C2'	H2'	108.4°	110.5°
C2'	C3'	N3'	117.1°	110.5°
C2'	C3'	H3'	108.4°	110.6°
N3'	C3'	H3'	108.4°	110.5°
C3'	N3'	H3'1	117.1°	106.7°
C3'	N3'	H3'2	109.5°	106.8°
H3'1	N3'	H3'2	109.4°	106.7°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N6	C10	H101	H102	125.2°	119.9°
N6	C10	H101	H103	125.3°	120.0°
N6	C10	H102	H103	114.4°	120.1°
C10	N6	C9	C6	179.9°	113.8°
C10	N6	C9	HC1	180.0°	179.9°
C10	N6	C9	HC2	54.7°	59.9°
C10	N6	C9	HC3	54.7°	60.0°
C10	N6	C6	C5	179.6°	179.7°
C10	N6	C6	N1	0.3°	0.1°
H101	C10	H102	H103	114.4°	120.0°
H101	C10	N6	C9	180.0°	66.2°
H101	C10	N6	C6	0.1°	180.0°
H102	C10	N6	C9	54.7°	173.8°
H102	C10	N6	C6	125.2°	60.1°
H103	C10	N6	C9	54.7°	53.8°
H103	C10	N6	C6	125.3°	60.0°
N6	C9	HC1	HC2	125.3°	120.1°
N6	C9	HC1	HC3	125.2°	120.0°
N6	C9	HC2	HC3	114.4°	120.0°
C9	N6	C6	C5	0.3°	66.5°
C9	N6	C6	N1	179.8°	113.9°
C6	N6	C9	HC1	0.0°	66.1°
C6	N6	C9	HC2	125.3°	173.7°
C6	N6	C9	HC3	125.2°	53.8°
N6	C6	C5	N1	179.9°	179.6°
N6	C6	C5	C4	179.9°	179.8°
N6	C6	C5	N7	0.1°	0.8°
N6	C6	N1	C2	179.4°	180.0°
HC1	C9	HC2	HC3	114.4°	119.9°
C6	C5	C4	N7	179.9°	179.2°
C6	C5	C4	N3	0.3°	0.6°
C6	C5	C4	N9	179.9°	179.7°
C5	C6	N1	C2	0.6°	0.3°
C6	C5	N7	C8	179.8°	179.5°
N1	C6	C5	C4	0.0°	0.6°
N1	C6	C5	N7	179.8°	179.6°
C6	N1	C2	N3	0.8°	0.0°
C6	N1	C2	H2	179.2°	180.0°
C5	C4	N3	N9	179.4°	179.7°
C5	C4	N3	C2	0.1°	0.3°
C4	C5	N7	C8	0.4°	0.4°
C5	C4	N9	C8	0.4°	0.3°
C5	C4	N9	C1'	179.6°	179.8°
N7	C5	C4	N3	179.6°	179.8°
N7	C5	C4	N9	0.0°	0.4°
C5	N7	C8	N9	0.7°	0.2°
C5	N7	C8	H8	179.4°	179.8°
C4	N3	C2	N1	0.5°	0.0°
C4	N3	C2	H2	179.5°	180.0°
N3	C4	N9	C8	179.9°	180.0°
N3	C4	N9	C1'	0.1°	0.1°
N9	C4	N3	C2	179.5°	180.0°
C4	N9	C8	N7	0.7°	0.1°
C4	N9	C8	C1'	179.9°	179.9°
C4	N9	C8	H8	179.4°	180.0°
C4	N9	C1'	O4'	131.1°	152.9°
C4	N9	C1'	C2'	109.7°	91.6°
C4	N9	C1'	H1'	21.5°	30.7°
N3	C2	N1	H2	180.0°	180.0°
N7	C8	N9	H8	180.0°	180.0°
N7	C8	N9	C1'	179.3°	180.0°
C8	N9	C1'	O4'	49.0°	27.0°
C8	N9	C1'	C2'	70.3°	88.5°
C8	N9	C1'	H1'	158.6°	149.2°
H8	C8	N9	C1'	0.7°	0.1°
N9	C1'	O4'	C2'	137.8°	118.9°
N9	C1'	O4'	H1'	109.6°	122.2°
N9	C1'	C2'	H1'	131.2°	122.2°
N9	C1'	O4'	C4'	134.9°	159.3°
N9	C1'	C2'	O2'	151.2°	98.5°
N9	C1'	C2'	C3'	84.5°	142.7°
N9	C1'	C2'	H2'	28.0°	24.2°
O4'	C1'	C2'	H1'	112.6°	118.9°
C1'	O4'	C4'	C5'	155.0°	159.5°
C1'	O4'	C4'	C3'	27.6°	40.6°
C1'	O4'	C4'	H4'	85.5°	78.3°
O4'	C1'	C2'	O2'	92.6°	142.6°
O4'	C1'	C2'	C3'	31.7°	23.8°
O4'	C1'	C2'	H2'	144.2°	94.7°
C2'	C1'	O4'	C4'	3.0°	40.5°
C1'	C2'	C3'	C4'	47.7°	0.2°
C1'	C2'	O2'	C3'	115.1°	114.7°
C1'	C2'	O2'	H2'	123.2°	122.7°
C1'	C2'	C3'	H2'	112.6°	118.5°
C1'	C2'	O2'	HA	180.0°	65.3°
C1'	C2'	C3'	N3'	171.4°	118.8°
C1'	C2'	C3'	H3'	65.7°	118.5°
H1'	C1'	O4'	C4'	115.6°	78.4°
H1'	C1'	C2'	O2'	20.0°	23.7°
H1'	C1'	C2'	C3'	144.3°	95.0°
H1'	C1'	C2'	H2'	103.1°	146.4°
O4'	C4'	C5'	C3'	117.6°	115.4°
O4'	C4'	C5'	H4'	119.5°	122.3°
O4'	C4'	C3'	H4'	113.1°	118.9°
O4'	C4'	C5'	O5'	56.0°	61.5°
O4'	C4'	C5'	H5'1	178.8°	178.5°
O4'	C4'	C5'	H5'2	69.3°	58.5°
O4'	C4'	C3'	C2'	47.2°	24.1°
O4'	C4'	C3'	N3'	173.0°	142.7°
O4'	C4'	C3'	H3'	66.2°	94.6°
C5'	C4'	C3'	H4'	122.9°	122.3°
C4'	C5'	O5'	H5'1	125.3°	120.0°
C4'	C5'	O5'	H5'2	125.3°	120.0°
C4'	C5'	H5'1	H5'2	116.8°	120.0°
C4'	C5'	O5'	H5'	180.0°	180.0°
C5'	C4'	C3'	C2'	171.2°	143.0°
C5'	C4'	C3'	N3'	63.0°	98.4°
C5'	C4'	C3'	H3'	57.8°	24.2°
C3'	C4'	C5'	O5'	61.7°	176.9°
C3'	C4'	C5'	H5'1	63.6°	63.1°
C3'	C4'	C5'	H5'2	173.1°	56.9°
C4'	C3'	C2'	O2'	78.0°	118.7°
C4'	C3'	C2'	N3'	123.6°	118.6°
C4'	C3'	C2'	H3'	113.4°	118.7°
C4'	C3'	C2'	H2'	160.3°	118.7°
C4'	C3'	N3'	H3'	120.8°	122.6°
C4'	C3'	N3'	H3'1	63.7°	61.6°
C4'	C3'	N3'	H3'2	171.0°	52.3°
H4'	C4'	C5'	O5'	175.5°	60.8°
H4'	C4'	C5'	H5'1	59.2°	59.2°
H4'	C4'	C5'	H5'2	50.2°	179.2°
H4'	C4'	C3'	C2'	65.9°	94.8°
H4'	C4'	C3'	N3'	59.9°	23.9°
H4'	C4'	C3'	H3'	179.3°	146.5°
O5'	C5'	H5'1	H5'2	116.8°	120.0°
H5'1	C5'	O5'	H5'	54.7°	60.0°
H5'2	C5'	O5'	H5'	54.8°	60.0°
O2'	C2'	C3'	H2'	121.7°	122.6°
O2'	C2'	C3'	N3'	45.7°	0.1°
O2'	C2'	C3'	H3'	168.6°	122.6°
C3'	C2'	O2'	HA	64.9°	180.0°
C2'	C3'	N3'	H3'	122.9°	122.7°
C2'	C3'	N3'	H3'1	180.0°	176.2°
C2'	C3'	N3'	H3'2	54.7°	62.3°
H2'	C2'	O2'	HA	56.8°	57.4°
H2'	C2'	C3'	N3'	76.1°	122.7°
H2'	C2'	C3'	H3'	46.9°	0.0°
C3'	N3'	H3'1	H3'2	125.3°	113.9°
H3'	C3'	N3'	H3'1	57.1°	61.1°
H3'	C3'	N3'	H3'2	68.2°	174.9°

Definition date:	2001-11-05
Last modified:	2020-06-17
Release status:	REL
Processing site:	EBI