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Summary Geometry Related PDB entries

GLJ

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N	CA	sing	1.47Å	1.46Å
N	H	sing	1.01Å	1.00Å
CA	C	sing	1.51Å	1.58Å
CA	CB	sing	1.53Å	1.54Å
CA	HA	sing	1.09Å	1.10Å
C	O	doub	1.21Å	1.24Å
CB	CG	sing	1.53Å	1.52Å
CB	HB2	sing	1.09Å	1.10Å
CB	HB3	sing	1.09Å	1.10Å
CG	CD	sing	1.53Å	1.52Å
CG	HG2	sing	1.09Å	1.10Å
CG	HG3	sing	1.09Å	1.10Å
CD	OE1	sing	1.43Å	1.42Å
CD	HD2	sing	1.09Å	1.10Å
CD	OE2	sing	1.43Å	1.43Å
OE1	HE1	sing	0.97Å	0.95Å
N	H2	sing	1.01Å	1.00Å
C	OXT	sing	1.34Å	1.43Å
OE2	HE2	sing	0.97Å	0.95Å
OXT	HXT	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
CA	N	H	109.5°	110.9°
N	CA	C	112.0°	109.5°
N	CA	CB	109.2°	109.5°
N	CA	HA	109.4°	109.4°
CA	N	H2	109.5°	111.0°
H	N	H2	109.5°	111.0°
C	CA	CB	113.5°	109.5°
C	CA	HA	104.7°	109.5°
CA	C	O	121.8°	120.0°
CA	C	OXT	131.2°	120.0°
CB	CA	HA	107.8°	109.5°
CA	CB	CG	106.7°	109.5°
CA	CB	HB2	110.4°	109.5°
CA	CB	HB3	110.4°	109.5°
O	C	OXT	107.0°	120.0°
CG	CB	HB2	110.4°	109.5°
CG	CB	HB3	110.4°	109.5°
CB	CG	CD	111.6°	109.4°
CB	CG	HG2	108.8°	109.5°
CB	CG	HG3	108.8°	109.5°
HB2	CB	HB3	108.5°	109.5°
CD	CG	HG2	108.8°	109.5°
CD	CG	HG3	108.8°	109.5°
CG	CD	OE1	110.1°	109.4°
CG	CD	HD2	109.1°	109.5°
CG	CD	OE2	109.3°	109.5°
HG2	CG	HG3	110.2°	109.5°
OE1	CD	HD2	109.1°	109.5°
OE1	CD	OE2	109.2°	109.4°
CD	OE1	HE1	109.5°	114.0°
HD2	CD	OE2	110.0°	109.5°
CD	OE2	HE2	109.5°	114.0°
C	OXT	HXT	109.5°	117.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
CA	N	H	H2	120.0°	124.0°
N	CA	C	CB	124.3°	120.0°
N	CA	C	HA	118.5°	120.0°
N	CA	CB	HA	118.8°	119.9°
N	CA	C	O	29.3°	20.0°
N	CA	CB	CG	177.4°	65.0°
N	CA	CB	HB2	62.7°	55.0°
N	CA	CB	HB3	57.4°	175.0°
N	CA	C	OXT	150.7°	160.0°
H	N	CA	C	180.0°	60.0°
H	N	CA	CB	53.4°	60.0°
H	N	CA	HA	64.4°	180.0°
C	CA	CB	HA	115.5°	120.0°
CA	C	O	OXT	180.0°	180.0°
C	CA	CB	CG	51.6°	175.0°
C	CA	CB	HB2	171.6°	65.0°
C	CA	CB	HB3	68.4°	55.0°
C	CA	N	H2	60.0°	176.0°
CA	C	OXT	HXT	180.0°	180.0°
CB	CA	C	O	153.6°	100.0°
CA	CB	CG	HB2	120.0°	120.0°
CA	CB	CG	HB3	120.0°	120.0°
CA	CB	HB2	HB3	121.1°	120.0°
CA	CB	CG	CD	64.8°	180.0°
CA	CB	CG	HG2	55.2°	60.0°
CA	CB	CG	HG3	175.2°	60.0°
CB	CA	N	H2	173.4°	63.9°
CB	CA	C	OXT	26.4°	80.0°
HA	CA	C	O	89.2°	140.0°
HA	CA	CB	CG	63.9°	54.9°
HA	CA	CB	HB2	56.1°	174.9°
HA	CA	CB	HB3	176.1°	65.0°
HA	CA	N	H2	55.6°	56.0°
HA	CA	C	OXT	90.8°	40.0°
O	C	OXT	HXT	0.0°	0.0°
CG	CB	HB2	HB3	121.2°	120.0°
CB	CG	CD	HG2	120.0°	120.0°
CB	CG	CD	HG3	120.0°	120.0°
CB	CG	HG2	HG3	119.1°	120.1°
CB	CG	CD	OE1	57.9°	65.0°
CB	CG	CD	HD2	61.9°	55.0°
CB	CG	CD	OE2	177.8°	175.0°
HB2	CB	CG	CD	175.2°	60.0°
HB2	CB	CG	HG2	64.8°	180.0°
HB2	CB	CG	HG3	55.2°	60.0°
HB3	CB	CG	CD	55.1°	60.0°
HB3	CB	CG	HG2	175.2°	60.0°
HB3	CB	CG	HG3	64.9°	180.0°
CD	CG	HG2	HG3	119.2°	120.0°
CG	CD	OE1	HD2	119.7°	120.0°
CG	CD	OE1	OE2	120.0°	120.0°
CG	CD	HD2	OE2	119.8°	120.1°
CG	CD	OE1	HE1	180.0°	60.0°
CG	CD	OE2	HE2	180.0°	180.0°
HG2	CG	CD	OE1	177.9°	175.0°
HG2	CG	CD	HD2	58.1°	65.0°
HG2	CG	CD	OE2	62.2°	55.1°
HG3	CG	CD	OE1	62.1°	55.0°
HG3	CG	CD	HD2	178.1°	175.0°
HG3	CG	CD	OE2	57.9°	64.9°
OE1	CD	HD2	OE2	119.8°	120.0°
OE1	CD	OE2	HE2	59.5°	60.0°
HD2	CD	OE1	HE1	60.3°	180.0°
HD2	CD	OE2	HE2	60.3°	60.0°
OE2	CD	OE1	HE1	60.0°	60.0°

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