G1P

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	C2	sing	1.53Å	1.63Å
C1	O1	sing	1.43Å	1.46Å
C1	O5	sing	1.43Å	1.52Å
C1	H1	sing	1.09Å	1.10Å
C2	C3	sing	1.53Å	1.56Å
C2	O2	sing	1.43Å	1.45Å
C2	H2	sing	1.09Å	1.10Å
C3	C4	sing	1.53Å	1.56Å
C3	O3	sing	1.43Å	1.46Å
C3	H3	sing	1.09Å	1.10Å
C4	C5	sing	1.53Å	1.58Å
C4	O4	sing	1.43Å	1.48Å
C4	H4	sing	1.09Å	1.10Å
C5	C6	sing	1.53Å	1.60Å
C5	O5	sing	1.43Å	1.54Å
C5	H5	sing	1.09Å	1.10Å
C6	O6	sing	1.43Å	1.47Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
O1	P	sing	1.61Å	1.67Å
O2	HO2	sing	0.97Å	0.95Å
O3	HO3	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å
O6	HO6	sing	0.97Å	0.95Å
P	O1P	doub	1.48Å	1.58Å
P	O2P	sing	1.61Å	1.59Å
P	O3P	sing	1.61Å	1.56Å
O2P	HOP2	sing	0.97Å	0.95Å
O3P	HOP3	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	C1	O1	112.9°	109.4°
C2	C1	O5	103.8°	109.4°
C2	C1	H1	112.5°	109.5°
C1	C2	C3	107.0°	109.2°
C1	C2	O2	123.0°	109.5°
C1	C2	H2	101.5°	109.5°
O1	C1	O5	113.3°	109.5°
O1	C1	H1	102.8°	109.5°
C1	O1	P	124.6°	123.0°
O5	C1	H1	112.0°	109.5°
C1	O5	C5	111.0°	114.1°
C3	C2	O2	109.0°	109.5°
C3	C2	H2	117.7°	109.5°
C2	C3	C4	102.5°	109.0°
C2	C3	O3	110.3°	109.5°
C2	C3	H3	116.0°	109.5°
O2	C2	H2	99.1°	109.5°
C2	O2	HO2	109.5°	114.0°
C4	C3	O3	116.1°	109.6°
C4	C3	H3	110.2°	109.5°
C3	C4	C5	113.6°	109.2°
C3	C4	O4	113.3°	109.5°
C3	C4	H4	102.9°	109.5°
O3	C3	H3	102.3°	109.6°
C3	O3	HO3	109.5°	114.0°
C5	C4	O4	106.7°	109.5°
C5	C4	H4	110.0°	109.6°
C4	C5	C6	106.3°	109.5°
C4	C5	O5	109.0°	109.4°
C4	C5	H5	113.2°	109.5°
O4	C4	H4	110.3°	109.5°
C4	O4	HO4	109.5°	114.0°
C6	C5	O5	113.1°	109.4°
C6	C5	H5	109.1°	109.5°
C5	C6	O6	111.0°	109.5°
C5	C6	H61	108.9°	109.5°
C5	C6	H62	109.0°	109.5°
O5	C5	H5	106.3°	109.5°
O6	C6	H61	109.0°	109.5°
O6	C6	H62	109.0°	109.5°
C6	O6	HO6	109.5°	114.0°
H61	C6	H62	109.9°	109.4°
O1	P	O1P	112.6°	109.5°
O1	P	O2P	98.2°	109.5°
O1	P	O3P	110.2°	109.5°
O1P	P	O2P	114.1°	109.4°
O1P	P	O3P	107.2°	109.5°
O2P	P	O3P	114.4°	109.5°
P	O2P	HOP2	109.5°	113.9°
P	O3P	HOP3	109.5°	114.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	C1	O1	O5	117.6°	119.9°
C2	C1	O1	H1	121.4°	120.0°
C2	C1	O5	H1	121.6°	120.0°
C1	C2	C3	O2	135.0°	120.0°
C1	C2	C3	H2	113.3°	119.9°
C1	C2	O2	H2	110.2°	120.1°
C1	C2	C3	C4	68.8°	56.9°
C1	C2	C3	O3	166.9°	176.8°
C1	C2	C3	H3	51.2°	62.9°
C2	C1	O5	C5	64.7°	61.2°
C2	C1	O1	P	60.2°	150.0°
C1	C2	O2	HO2	180.0°	60.0°
O1	C1	O5	H1	115.7°	120.1°
O1	C1	C2	C3	50.1°	62.4°
O1	C1	C2	O2	77.0°	57.6°
O1	C1	C2	H2	174.0°	177.7°
O1	C1	O5	C5	58.0°	58.8°
C1	O1	P	O1P	157.3°	55.0°
C1	O1	P	O2P	82.2°	65.0°
C1	O1	P	O3P	37.6°	175.0°
O5	C1	C2	C3	72.9°	57.6°
O5	C1	C2	O2	160.0°	177.6°
O5	C1	C2	H2	51.0°	62.3°
C1	O5	C5	C4	56.6°	61.2°
C1	O5	C5	C6	174.6°	178.8°
C1	O5	C5	H5	65.7°	58.8°
O5	C1	O1	P	177.7°	90.1°
H1	C1	C2	C3	165.8°	177.6°
H1	C1	C2	O2	38.7°	62.4°
H1	C1	C2	H2	70.2°	57.7°
H1	C1	O5	C5	173.8°	178.8°
H1	C1	O1	P	61.2°	30.0°
C3	C2	O2	H2	123.6°	120.1°
C2	C3	C4	O3	120.3°	119.9°
C2	C3	C4	H3	124.0°	119.8°
C2	C3	O3	H3	124.0°	120.2°
C2	C3	C4	C5	61.1°	57.0°
C2	C3	C4	O4	177.0°	176.9°
C2	C3	C4	H4	57.8°	63.0°
C3	C2	O2	HO2	53.7°	179.7°
C2	C3	O3	HO3	180.0°	60.0°
O2	C2	C3	C4	156.2°	176.9°
O2	C2	C3	O3	31.9°	63.2°
O2	C2	C3	H3	83.8°	57.1°
H2	C2	C3	C4	44.5°	63.0°
H2	C2	C3	O3	79.8°	56.9°
H2	C2	C3	H3	164.5°	177.2°
H2	C2	O2	HO2	69.9°	60.2°
C4	C3	O3	H3	120.0°	120.3°
C3	C4	C5	O4	125.5°	119.9°
C3	C4	C5	H4	114.8°	120.0°
C3	C4	O4	H4	114.8°	120.1°
C3	C4	C5	C6	177.2°	177.6°
C3	C4	C5	O5	54.9°	57.7°
C3	C4	C5	H5	63.1°	62.4°
C4	C3	O3	HO3	64.0°	179.5°
C3	C4	O4	HO4	180.0°	60.0°
O3	C3	C4	C5	178.6°	176.9°
O3	C3	C4	O4	56.7°	63.3°
O3	C3	C4	H4	62.5°	56.9°
H3	C3	C4	C5	62.9°	62.8°
H3	C3	C4	O4	59.0°	57.1°
H3	C3	C4	H4	178.1°	177.2°
H3	C3	O3	HO3	56.0°	60.2°
C5	C4	O4	H4	119.5°	120.2°
C4	C5	C6	O5	119.6°	119.9°
C4	C5	C6	H5	122.3°	120.1°
C4	C5	O5	H5	122.3°	120.0°
C4	C5	C6	O6	58.0°	175.0°
C4	C5	C6	H61	178.0°	55.0°
C4	C5	C6	H62	62.0°	64.9°
C5	C4	O4	HO4	54.3°	179.7°
O4	C4	C5	C6	57.3°	62.5°
O4	C4	C5	O5	179.5°	177.5°
O4	C4	C5	H5	62.4°	57.5°
H4	C4	C5	C6	62.4°	57.6°
H4	C4	C5	O5	59.8°	62.3°
H4	C4	C5	H5	177.9°	177.7°
H4	C4	O4	HO4	65.2°	60.1°
C6	C5	O5	H5	119.7°	120.0°
C5	C6	O6	H61	120.0°	120.0°
C5	C6	O6	H62	120.0°	120.1°
C5	C6	H61	H62	119.4°	120.0°
C5	C6	O6	HO6	180.0°	180.0°
O5	C5	C6	O6	61.6°	65.1°
O5	C5	C6	H61	58.4°	174.9°
O5	C5	C6	H62	178.3°	55.0°
H5	C5	C6	O6	179.7°	54.9°
H5	C5	C6	H61	59.7°	65.0°
H5	C5	C6	H62	60.3°	175.0°
O6	C6	H61	H62	119.4°	120.0°
H61	C6	O6	HO6	60.0°	60.0°
H62	C6	O6	HO6	60.0°	59.9°
O1	P	O1P	O2P	110.8°	120.0°
O1	P	O1P	O3P	121.4°	120.0°
O1	P	O2P	O3P	116.7°	120.0°
O1	P	O2P	HOP2	119.3°	60.0°
O1	P	O3P	HOP3	122.9°	180.0°
O1P	P	O2P	O3P	124.0°	120.0°
O1P	P	O2P	HOP2	0.0°	180.0°
O1P	P	O3P	HOP3	0.0°	60.0°
O2P	P	O3P	HOP3	127.6°	59.9°
O3P	P	O2P	HOP2	124.0°	60.0°

Definition date:	1999-07-08
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	3GPB