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DO4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3C5doub1.21Å1.21Å
C5C4sing1.51Å1.51Å
C5H5sing1.08Å1.08Å
C4C3sing1.53Å1.53Å
C4H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C3C2sing1.51Å1.51Å
C3H31sing1.09Å1.10Å
C3H32sing1.09Å1.10Å
C2O5doub1.21Å1.23Å
C2C1sing1.49Å1.46Å
C1O1doub1.21Å1.25Å
C1O2sing1.35Å1.26Å
O2HO2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3C5C4119.3°120.1°
O3C5H5120.4°120.0°
C4C5H5120.4°119.9°
C5C4C3109.5°109.5°
C5C4H41109.4°109.5°
C5C4H42109.4°109.4°
C3C4H41109.4°109.5°
C3C4H42109.4°109.5°
C4C3C2109.2°109.5°
C4C3H31109.6°109.5°
C4C3H32109.6°109.5°
H41C4H42109.6°109.4°
C2C3H31109.6°109.4°
C2C3H32109.6°109.5°
C3C2O5120.8°120.0°
C3C2C1121.0°120.0°
H31C3H32109.2°109.5°
O5C2C1118.2°120.0°
C2C1O1120.4°120.0°
C2C1O2117.1°120.0°
O1C1O2122.5°120.0°
C1O2HO2109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3C5C4H5180.0°179.7°
O3C5C4C391.6°125.0°
O3C5C4H41148.4°115.0°
O3C5C4H4228.3°4.9°
C5C4C3H41120.0°120.1°
C5C4C3H42120.0°120.0°
C5C4H41H42120.0°119.9°
C5C4C3C2179.4°180.0°
C5C4C3H3159.4°60.0°
C5C4C3H3260.5°60.1°
H5C5C4C388.4°54.7°
H5C5C4H4131.6°65.3°
H5C5C4H42151.7°174.8°
C3C4H41H42120.0°120.0°
C4C3C2H31120.0°120.0°
C4C3C2H32120.1°120.0°
C4C3H31H32120.1°120.0°
C4C3C2O53.9°0.0°
C4C3C2C1176.1°180.0°
H41C4C3C260.7°60.0°
H41C4C3H31179.3°179.9°
H41C4C3H3259.4°60.0°
H42C4C3C259.4°60.0°
H42C4C3H3160.6°60.0°
H42C4C3H32179.5°180.0°
C2C3H31H32120.1°120.0°
C3C2O5C1180.0°180.0°
C3C2C1O10.6°0.0°
C3C2C1O2180.0°180.0°
H31C3C2O5123.9°120.0°
H31C3C2C156.1°60.0°
H32C3C2O5116.2°120.0°
H32C3C2C163.8°60.0°
O5C2C1O1179.4°180.0°
O5C2C1O20.0°0.0°
C2C1O1O2179.4°180.0°
C2C1O2HO2179.4°180.0°
O1C1O2HO20.0°0.0°

219140

PDB entries from 2024-05-01

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