Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

D87

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAQCAPsing1.53Å1.50Å
CAPCAOsing1.53Å1.52Å
CAOCANsing1.53Å1.50Å
CANCALsing1.51Å1.51Å
CAMCALdoub1.35Å1.41ÅAromatic
CAMCAJsing1.46Å1.44ÅAromatic
CALOAKsing1.34Å1.37ÅAromatic
CADCAFdoub1.37Å1.40ÅAromatic
CADCABsing1.40Å1.38ÅAromatic
CAFCAEsing1.39Å1.39ÅAromatic
CAJCABdoub1.46Å1.39ÅAromatic
CAJCAHsing1.40Å1.35ÅAromatic
CABCAAsing1.42Å1.38ÅAromatic
OAKCAHsing1.35Å1.34ÅAromatic
CAECACdoub1.36Å1.36ÅAromatic
CAHCAGdoub1.40Å1.39ÅAromatic
CAACACsing1.40Å1.42ÅAromatic
CAANAIdoub1.34Å1.37ÅAromatic
CAGNAIsing1.31Å1.33ÅAromatic
CAGNARsing1.39Å1.30Å
CAQH1sing1.09Å1.10Å
CAQH2sing1.09Å1.10Å
CAQH3sing1.09Å1.10Å
CAPH4sing1.09Å1.10Å
CAPH5sing1.09Å1.10Å
CAOH6sing1.09Å1.10Å
CAOH7sing1.09Å1.10Å
CANH8sing1.09Å1.10Å
CANH9sing1.09Å1.10Å
CAMH10sing1.08Å1.08Å
CADH11sing1.08Å1.08Å
CAFH12sing1.08Å1.08Å
CAEH13sing1.08Å1.08Å
CACH14sing1.08Å1.08Å
NARH15sing0.97Å1.00Å
NARH16sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAQCAPCAO118.6°109.4°
CAPCAQH1109.5°109.5°
CAPCAQH2109.5°109.5°
CAPCAQH3109.5°109.5°
CAQCAPH4107.1°109.4°
CAQCAPH5107.1°109.5°
CAPCAOCAN104.2°109.4°
CAOCAPH4107.1°109.5°
CAOCAPH5107.2°109.5°
CAPCAOH6110.8°109.5°
CAPCAOH7110.8°109.5°
CAOCANCAL106.2°109.5°
CANCAOH6110.8°109.4°
CANCAOH7110.8°109.5°
CAOCANH8110.3°109.4°
CAOCANH9110.3°109.5°
CANCALCAM130.7°125.1°
CANCALOAK122.3°125.0°
CALCANH8110.3°109.5°
CALCANH9110.3°109.5°
CALCAMCAJ106.5°106.1°
CAMCALOAK106.9°109.9°
CALCAMH10126.7°127.0°
CAMCAJCAB135.3°135.8°
CAMCAJCAH105.8°105.9°
CAJCAMH10126.8°126.9°
CALOAKCAH109.1°110.9°
CAFCADCAB118.3°119.7°
CADCAFCAE122.6°120.7°
CAFCADH11120.8°120.1°
CADCAFH12118.7°119.7°
CADCABCAJ121.9°122.1°
CADCABCAA118.1°119.8°
CABCADH11120.8°120.2°
CAFCAECAC120.2°121.0°
CAECAFH12118.7°119.6°
CAFCAEH13119.9°119.5°
CABCAJCAH118.6°118.2°
CAJCABCAA119.8°118.1°
CAJCAHOAK111.4°107.2°
CAJCAHCAG120.6°118.8°
CABCAACAC123.7°118.9°
CABCAANAI120.1°120.0°
OAKCAHCAG127.9°134.0°
CAECACCAA116.8°119.9°
CACCAEH13119.9°119.5°
CAECACH14121.6°120.1°
CAHCAGNAI120.9°122.0°
CAHCAGNAR119.1°119.1°
CACCAANAI115.9°121.1°
CAACACH14121.6°120.0°
CAANAICAG119.6°122.9°
NAICAGNAR119.8°119.0°
CAGNARH15109.5°120.0°
CAGNARH16109.5°120.1°
H1CAQH2109.5°109.4°
H1CAQH3109.4°109.4°
H2CAQH3109.4°109.4°
H4CAPH5109.5°109.5°
H6CAOH7109.5°109.5°
H8CANH9109.5°109.5°
H15NARH16109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAQCAPCAOH4121.3°119.9°
CAQCAPCAOH5121.3°120.0°
CAQCAPCAOCAN141.8°180.0°
CAPCAQH1H2120.0°120.1°
CAPCAQH1H3120.0°120.0°
CAPCAQH2H3120.0°120.0°
CAQCAPH4H5115.9°120.0°
CAQCAPCAOH622.6°60.1°
CAQCAPCAOH799.0°60.0°
CAPCAOCANH6119.2°119.9°
CAPCAOCANH7119.2°120.0°
CAPCAOCANCAL71.9°180.0°
CAOCAPCAQH1180.0°180.0°
CAOCAPCAQH260.0°60.0°
CAOCAPCAQH360.0°60.0°
CAOCAPH4H5115.9°120.1°
CAPCAOH6H7122.4°120.1°
CAPCAOCANH8168.6°60.1°
CAPCAOCANH947.5°60.0°
CAOCANCALH8119.5°119.9°
CAOCANCALH9119.5°120.0°
CAOCANCALCAM120.3°90.3°
CAOCANCALOAK55.4°90.1°
CANCAOCAPH496.9°60.1°
CANCAOCAPH520.5°60.0°
CANCAOH6H7122.5°120.0°
CAOCANH8H9121.5°120.1°
CANCALCAMOAK176.2°179.7°
CANCALCAMCAJ178.8°180.0°
CANCALOAKCAH179.6°180.0°
CALCANCAOH647.2°60.1°
CALCANCAOH7168.9°60.0°
CALCANH8H9121.5°120.0°
CANCALCAMH101.2°0.0°
CALCAMCAJH10180.0°180.0°
CALCAMCAJCAB178.1°179.9°
CALCAMCAJCAH4.4°0.1°
CAMCALOAKCAH3.8°0.3°
CAMCALCANH8120.2°29.7°
CAMCALCANH90.9°149.7°
CAJCAMCALOAK5.0°0.3°
CAMCAJCABCAD7.2°0.1°
CAMCAJCABCAH173.1°179.9°
CAMCAJCABCAA177.6°179.9°
CAMCAJCAHOAK2.1°0.0°
CAMCAJCAHCAG179.1°179.9°
CALOAKCAHCAJ1.0°0.2°
CALOAKCAHCAG177.6°180.0°
OAKCALCANH864.1°150.0°
OAKCALCANH9174.8°30.0°
OAKCALCAMH10175.0°179.7°
CAFCADCABH11180.0°179.9°
CADCAFCAEH12180.0°180.0°
CAFCADCABCAJ179.7°180.0°
CAFCADCABCAA5.1°0.0°
CADCAFCAECAC0.3°0.0°
CADCAFCAEH13179.8°180.0°
CABCADCAFCAE2.0°0.0°
CADCABCAJCAA175.2°180.0°
CADCABCAJCAH179.8°179.8°
CADCABCAACAC6.9°0.1°
CADCABCAANAI179.8°179.9°
CABCADCAFH12178.0°180.0°
CAFCAECACH13180.0°180.0°
CAFCAECACCAA1.7°0.0°
CAECAFCADH11178.0°179.9°
CAFCAECACH14178.3°179.9°
CABCAJCAHOAK177.1°179.9°
CABCAJCAHCAG4.2°0.1°
CAJCABCAACAC177.7°180.0°
CAJCABCAANAI4.8°0.0°
CABCAJCAMH101.9°0.1°
CAJCABCADH110.4°0.1°
CAHCAJCABCAA4.5°0.2°
CAJCAHOAKCAG178.6°179.8°
CAJCAHCAGNAI4.1°0.4°
CAJCAHCAGNAR178.8°179.8°
CAHCAJCAMH10175.6°179.9°
CABCAACACCAE5.2°0.0°
CABCAACACNAI173.2°180.0°
CABCAANAICAG4.6°0.3°
CAACABCADH11174.9°180.0°
CABCAACACH14174.8°180.0°
OAKCAHCAGNAI177.4°179.8°
OAKCAHCAGNAR2.7°0.0°
CAECACCAAH14180.0°179.9°
CAECACCAANAI178.4°179.9°
CACCAECAFH12179.7°180.0°
CAHCAGNAICAA4.3°0.6°
CAHCAGNAINAR174.6°179.8°
CAHCAGNARH15174.7°0.0°
CAHCAGNARH1654.7°180.0°
CACCAANAICAG178.1°179.7°
CAACACCAEH13178.3°180.0°
CAANAICAGNAR178.9°179.7°
NAICAACACH141.6°0.0°
NAICAGNARH150.0°179.8°
NAICAGNARH16120.0°0.2°
CAGNARH15H16120.0°180.0°
H1CAQH2H3120.0°119.9°
H1CAQCAPH458.7°60.0°
H1CAQCAPH558.7°60.0°
H2CAQCAPH461.3°60.0°
H2CAQCAPH5178.7°180.0°
H3CAQCAPH4178.7°180.0°
H3CAQCAPH561.3°60.0°
H4CAPCAOH6143.9°NaN°
H4CAPCAOH722.3°59.9°
H5CAPCAOH698.7°60.0°
H5CAPCAOH7139.7°180.0°
H6CAOCANH872.3°180.0°
H6CAOCANH9166.7°60.0°
H7CAOCANH849.4°60.0°
H7CAOCANH971.6°180.0°
H11CADCAFH122.0°0.1°
H12CAFCAEH130.2°0.0°
H13CAECACH141.7°0.0°

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon