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CDI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C3sing1.55Å1.56Å
C4O2sing1.43Å1.43Å
C4HC41sing1.09Å1.11Å
C4HC42sing1.09Å1.11Å
C3OB4sing1.44Å1.46Å
C3C2sing1.53Å1.57Å
C3C5sing1.52Å1.56Å
OB4PBsing1.60Å1.62Å
PBOB2sing1.62Å1.59Å
PBOB3doub1.47Å1.61Å
PBOB1sing1.62Å1.54Å
OB2HB2Osing0.97Å0.95Å
PAOA3sing1.61Å1.61Å
PAOA1sing1.61Å1.58Å
PAOA2doub1.48Å1.59Å
PAOB1sing1.61Å1.51Å
OA3C1sing1.41Å1.46Å
OA1HA1Osing0.97Å0.95Å
C1C2sing1.52Å1.58Å
C1HC11sing1.10Å1.12Å
C1HC12sing1.09Å1.11Å
C2O1sing1.44Å1.43Å
C2HC2sing1.10Å1.12Å
O1HO1sing0.97Å0.95Å
C5HC51sing1.09Å1.11Å
C5HC52sing1.09Å1.11Å
C5HC53sing1.09Å1.11Å
O2HO2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C4O2110.8°109.5°
C3C4HC41111.7°109.5°
C3C4HC42111.7°109.5°
C4C3OB4107.9°106.3°
C4C3C2114.1°107.3°
C4C3C5107.9°107.2°
O2C4HC41111.8°109.4°
O2C4HC42111.7°109.5°
C4O2HO2110.8°106.8°
HC41C4HC4298.7°109.4°
OB4C3C2104.8°110.1°
OB4C3C5112.2°112.2°
C3OB4PB141.0°111.1°
C2C3C5110.0°113.3°
C3C2C1115.7°113.6°
C3C2O1110.8°108.4°
C3C2HC2102.9°109.6°
C3C5HC51112.8°109.4°
C3C5HC52108.0°109.5°
C3C5HC53112.8°109.5°
OB4PBOB2110.9°108.0°
OB4PBOB3111.7°113.1°
OB4PBOB1111.7°108.7°
OB2PBOB3109.9°108.5°
OB2PBOB192.0°107.5°
PBOB2HB2O110.9°106.7°
OB3PBOB1118.9°110.8°
PBOB1PA123.1°105.8°
OA3PAOA1111.8°110.0°
OA3PAOA2112.9°109.7°
OA3PAOB1123.6°108.8°
PAOA3C1141.2°108.8°
OA1PAOA2109.2°109.3°
OA1PAOB199.4°109.6°
PAOA1HA1O111.8°106.9°
OA2PAOB198.3°109.5°
OA3C1C2116.1°113.6°
OA3C1HC11109.8°108.2°
OA3C1HC12109.8°110.0°
C2C1HC11109.8°108.2°
C2C1HC12109.8°110.5°
C1C2O1105.0°108.4°
C1C2HC2108.8°109.8°
HC11C1HC12100.4°105.9°
O1C2HC2113.9°106.7°
C2O1HO1110.8°106.8°
HC51C5HC52112.8°109.4°
HC51C5HC5397.7°109.5°
HC52C5HC53112.8°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C4O2HC41125.3°120.0°
C3C4O2HC42125.2°120.1°
C3C4HC41HC42117.6°120.0°
C4C3OB4C2121.9°115.9°
C4C3OB4C5118.8°116.9°
C4C3C2C5121.4°118.1°
C4C3OB4PB109.8°174.1°
C4C3C2C1178.6°134.2°
C4C3C2O162.1°13.6°
C4C3C2HC260.1°102.5°
C4C3C5HC5154.7°60.0°
C4C3C5HC52180.0°59.9°
C4C3C5HC5354.8°179.9°
C3C4O2HO2180.0°180.0°
O2C4HC41HC42117.6°120.0°
O2C4C3OB458.9°60.2°
O2C4C3C257.1°178.0°
O2C4C3C5179.6°60.1°
HC41C4C3OB466.4°59.8°
HC41C4C3C2177.6°58.0°
HC41C4C3C555.1°180.0°
HC41C4O2HO254.7°60.0°
HC42C4C3OB4175.9°179.7°
HC42C4C3C268.2°62.0°
HC42C4C3C554.4°60.0°
HC42C4O2HO254.8°59.9°
OB4C3C2C5120.8°126.6°
C3OB4PBOB2179.3°169.6°
C3OB4PBOB356.3°49.5°
C3OB4PBOB179.6°74.0°
OB4C3C2C160.8°110.5°
OB4C3C2O1179.8°128.9°
OB4C3C2HC257.7°12.8°
OB4C3C5HC51173.5°56.4°
OB4C3C5HC5261.3°176.3°
OB4C3C5HC5364.0°63.7°
C2C3OB4PB128.3°58.2°
C3C2C1OA357.4°61.3°
C3C2C1O1122.5°120.6°
C3C2C1HC2115.1°123.2°
C3C2C1HC1167.9°178.5°
C3C2C1HC12177.3°63.0°
C3C2O1HC2115.4°118.0°
C3C2O1HO1180.0°176.2°
C2C3C5HC5170.3°178.1°
C2C3C5HC5255.0°58.2°
C2C3C5HC53179.8°61.8°
C5C3OB4PB9.0°69.0°
C5C3C2C160.0°16.2°
C5C3C2O159.4°104.4°
C5C3C2HC2178.5°139.5°
C3C5HC51HC52122.6°119.9°
C3C5HC51HC53118.7°120.1°
C3C5HC52HC53125.3°120.0°
OB4PBOB2OB3124.0°122.9°
OB4PBOB2OB1114.2°117.1°
OB4PBOB3OB1132.4°122.4°
OB4PBOB2HB2O180.0°180.0°
OB4PBOB1PA28.9°118.4°
OB2PBOB3OB1104.0°117.9°
OB2PBOB1PA84.6°124.9°
OB3PBOB2HB2O56.0°57.2°
OB3PBOB1PA161.3°6.5°
OB1PBOB2HB2O65.8°62.8°
PBOB1PAOA325.6°42.2°
PBOB1PAOA198.6°162.5°
PBOB1PAOA2150.3°77.6°
OA3PAOA1OA2125.6°120.5°
OA3PAOA1OB1132.1°119.6°
OA3PAOA2OB1132.0°119.2°
OA3PAOA1HA1O180.0°179.6°
PAOA3C1C292.7°64.2°
PAOA3C1HC1132.5°56.0°
PAOA3C1HC12142.0°171.3°
OA1PAOA2OB1103.1°120.1°
OA1PAOA3C1179.8°50.2°
OA2PAOA3C156.7°170.4°
OA2PAOA1HA1O54.4°60.0°
OB1PAOA3C161.3°69.9°
OB1PAOA1HA1O47.9°60.0°
OA3C1C2HC11125.3°120.2°
OA3C1C2HC12125.3°124.3°
OA3C1HC11HC12115.6°117.9°
OA3C1C2O1179.9°178.1°
OA3C1C2HC257.7°61.9°
C2C1HC11HC12115.6°118.5°
C1C2O1HC2119.0°118.3°
C1C2O1HO154.4°60.0°
HC11C1C2O154.6°57.9°
HC11C1C2HC2177.0°58.4°
HC12C1C2O154.8°57.7°
HC12C1C2HC267.6°173.9°
HC2C2O1HO164.6°58.2°
HC51C5HC52HC53109.5°120.0°

219140

PDB entries from 2024-05-01

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