Obsolete: 8NK

8NK was replaced with M7G on

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O2'	C2'	sing	1.43Å	1.42Å
O3'	C3'	sing	1.43Å	1.42Å
N2	C2	sing	1.37Å	1.33Å
C2'	C3'	sing	1.55Å	1.54Å
C2'	C1'	sing	1.55Å	1.53Å
N3	C2	doub	1.32Å	1.33Å
N3	C4	sing	1.34Å	1.34Å
C2	N1	sing	1.36Å	1.37Å
C3'	C4'	sing	1.54Å	1.53Å
C1'	O4'	sing	1.44Å	1.41Å
C1'	N9	sing	1.46Å	1.47Å
C4'	O4'	sing	1.44Å	1.44Å
C4'	C5'	sing	1.53Å	1.51Å
N1	C6	sing	1.35Å	1.38Å
C4	N9	sing	1.37Å	1.37Å	Aromatic
C4	C5	doub	1.40Å	1.37Å	Aromatic
N9	C8	sing	1.36Å	1.33Å	Aromatic
C5'	O5'	sing	1.43Å	1.44Å
C5	C6	sing	1.41Å	1.42Å
C5	N7	sing	1.36Å	1.39Å	Aromatic
C6	O6	doub	1.22Å	1.23Å
C8	N7	doub	1.30Å	1.32Å	Aromatic
O5'	PA	sing	1.61Å	1.58Å
N7	CM7	sing	1.46Å	1.47Å
PA	O3A	sing	1.61Å	1.59Å
PA	O1A	doub	1.48Å	1.48Å
PA	O2A	sing	1.61Å	1.52Å
O3A	PB	sing	1.61Å	1.59Å
O1B	PB	doub	1.48Å	1.49Å
PB	O2B	sing	1.61Å	1.53Å
PB	O3B	sing	1.61Å	1.53Å
O2A	H1	sing	0.97Å	0.95Å
O2B	H2	sing	0.97Å	0.95Å
O3B	H3	sing	0.97Å	0.95Å
C5'	H4	sing	1.09Å	1.10Å
C5'	H5	sing	1.09Å	1.10Å
C4'	H6	sing	1.09Å	1.10Å
C3'	H7	sing	1.09Å	1.10Å
O3'	H8	sing	0.97Å	0.95Å
C2'	H9	sing	1.09Å	1.10Å
O2'	H10	sing	0.97Å	0.95Å
C1'	H11	sing	1.09Å	1.10Å
C8	H12	sing	1.08Å	1.08Å
CM7	H13	sing	1.09Å	1.10Å
CM7	H14	sing	1.09Å	1.10Å
CM7	H15	sing	1.09Å	1.10Å
N1	H16	sing	0.97Å	1.00Å
N2	H17	sing	0.97Å	1.00Å
N2	H18	sing	0.97Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2'	C2'	C3'	111.8°	110.9°
O2'	C2'	C1'	110.6°	110.9°
O2'	C2'	H9	110.9°	110.9°
C2'	O2'	H10	109.5°	114.0°
O3'	C3'	C2'	111.6°	110.6°
O3'	C3'	C4'	110.3°	110.5°
O3'	C3'	H7	111.0°	110.4°
C3'	O3'	H8	109.5°	114.0°
N2	C2	N3	119.6°	119.0°
N2	C2	N1	117.0°	119.1°
C2	N2	H17	120.0°	120.0°
C2	N2	H18	120.0°	120.0°
C3'	C2'	C1'	104.9°	102.1°
C2'	C3'	C4'	104.8°	104.2°
C2'	C3'	H7	109.4°	110.5°
C3'	C2'	H9	109.2°	110.9°
C2'	C1'	O4'	107.8°	103.4°
C2'	C1'	N9	113.2°	110.6°
C1'	C2'	H9	109.3°	110.9°
C2'	C1'	H11	108.6°	110.6°
C2	N3	C4	112.7°	121.1°
N3	C2	N1	123.4°	121.9°
N3	C4	N9	126.1°	134.2°
N3	C4	C5	127.3°	119.7°
C2	N1	C6	125.7°	120.3°
C2	N1	H16	117.2°	119.8°
C3'	C4'	O4'	106.6°	107.3°
C3'	C4'	C5'	114.1°	109.9°
C3'	C4'	H6	108.7°	109.9°
C4'	C3'	H7	109.5°	110.4°
O4'	C1'	N9	107.5°	110.6°
C1'	O4'	C4'	110.1°	107.0°
O4'	C1'	H11	110.3°	110.6°
C1'	N9	C4	127.4°	126.2°
C1'	N9	C8	123.4°	126.3°
N9	C1'	H11	109.4°	110.7°
O4'	C4'	C5'	108.4°	109.9°
O4'	C4'	H6	109.9°	109.9°
C4'	C5'	O5'	107.6°	109.5°
C4'	C5'	H4	109.9°	109.4°
C4'	C5'	H5	109.9°	109.5°
C5'	C4'	H6	109.0°	109.9°
N1	C6	C5	110.5°	118.4°
N1	C6	O6	121.0°	120.8°
C6	N1	H16	117.1°	119.9°
N9	C4	C5	106.6°	106.1°
C4	N9	C8	109.1°	107.5°
C4	C5	C6	120.4°	118.6°
C4	C5	N7	106.6°	107.3°
N9	C8	N7	109.0°	109.8°
N9	C8	H12	125.5°	125.1°
C5'	O5'	PA	128.8°	123.0°
O5'	C5'	H4	109.9°	109.5°
O5'	C5'	H5	110.0°	109.5°
C6	C5	N7	133.0°	134.1°
C5	C6	O6	128.5°	120.8°
C5	N7	C8	108.7°	109.3°
C5	N7	CM7	126.6°	125.3°
C8	N7	CM7	124.7°	125.4°
N7	C8	H12	125.5°	125.1°
O5'	PA	O3A	103.9°	109.5°
O5'	PA	O1A	114.8°	109.5°
O5'	PA	O2A	109.4°	109.5°
N7	CM7	H13	109.5°	109.5°
N7	CM7	H14	109.5°	109.5°
N7	CM7	H15	109.4°	109.5°
O3A	PA	O1A	110.1°	109.5°
O3A	PA	O2A	108.1°	109.4°
PA	O3A	PB	133.1°	134.1°
O1A	PA	O2A	110.3°	109.4°
PA	O2A	H1	109.5°	114.0°
O3A	PB	O1B	109.2°	109.5°
O3A	PB	O2B	106.3°	109.5°
O3A	PB	O3B	106.5°	109.5°
O1B	PB	O2B	113.1°	109.5°
O1B	PB	O3B	112.9°	109.4°
O2B	PB	O3B	108.3°	109.5°
PB	O2B	H2	109.5°	114.0°
PB	O3B	H3	109.5°	114.0°
H4	C5'	H5	109.5°	109.5°
H13	CM7	H14	109.4°	109.5°
H13	CM7	H15	109.5°	109.4°
H14	CM7	H15	109.5°	109.4°
H17	N2	H18	120.0°	120.1°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2'	C2'	C3'	O3'	5.4°	20.3°
O2'	C2'	C3'	C1'	119.9°	118.2°
O2'	C2'	C3'	H9	123.0°	123.6°
O2'	C2'	C1'	H9	122.3°	123.7°
O2'	C2'	C3'	C4'	114.0°	139.1°
O2'	C2'	C1'	O4'	129.6°	155.2°
O2'	C2'	C1'	N9	111.7°	86.3°
O2'	C2'	C3'	H7	128.7°	102.3°
O2'	C2'	C1'	H11	10.1°	36.7°
O3'	C3'	C2'	C4'	119.4°	118.8°
O3'	C3'	C2'	H7	123.2°	122.6°
O3'	C3'	C2'	C1'	125.4°	97.8°
O3'	C3'	C4'	H7	122.5°	122.5°
O3'	C3'	C4'	O4'	138.8°	120.8°
O3'	C3'	C4'	C5'	101.5°	119.7°
O3'	C3'	C4'	H6	20.3°	1.4°
O3'	C3'	C2'	H9	117.6°	144.0°
N2	C2	N3	N1	179.5°	180.0°
N2	C2	N3	C4	179.3°	179.7°
N2	C2	N1	C6	179.2°	180.0°
N2	C2	N1	H16	0.8°	0.0°
C2	N2	H17	H18	180.0°	179.9°
C3'	C2'	C1'	H9	116.9°	118.2°
C2'	C3'	C4'	H7	117.2°	118.7°
C3'	C2'	C1'	O4'	8.8°	37.1°
C3'	C2'	C1'	N9	127.6°	155.5°
C2'	C3'	C4'	O4'	18.5°	2.0°
C2'	C3'	C4'	C5'	138.2°	121.5°
C2'	C3'	C4'	H6	100.0°	117.5°
C2'	C3'	O3'	H8	180.0°	65.2°
C3'	C2'	O2'	H10	180.0°	61.5°
C3'	C2'	C1'	H11	110.7°	81.4°
C1'	C2'	C3'	C4'	6.0°	20.9°
C2'	C1'	O4'	N9	122.4°	118.5°
C2'	C1'	O4'	H11	118.4°	118.5°
C2'	C1'	N9	H11	121.2°	123.0°
C2'	C1'	O4'	C4'	21.5°	40.1°
C2'	C1'	N9	C4	63.7°	84.7°
C2'	C1'	N9	C8	116.6°	94.9°
C1'	C2'	C3'	H7	111.4°	139.5°
C1'	C2'	O2'	H10	63.4°	174.2°
N3	C2	N1	C6	0.3°	0.0°
C2	N3	C4	N9	179.8°	179.6°
C2	N3	C4	C5	0.0°	0.6°
N3	C2	N1	H16	179.7°	179.9°
N3	C2	N2	H17	0.0°	179.9°
N3	C2	N2	H18	180.0°	0.0°
C4	N3	C2	N1	0.2°	0.3°
N3	C4	N9	C1'	0.7°	0.8°
N3	C4	N9	C5	179.8°	179.1°
N3	C4	N9	C8	179.5°	179.5°
N3	C4	C5	C6	0.2°	0.5°
N3	C4	C5	N7	179.6°	179.7°
C2	N1	C6	H16	180.0°	180.0°
C2	N1	C6	C5	0.1°	0.0°
C2	N1	C6	O6	179.6°	179.9°
N1	C2	N2	H17	179.5°	0.0°
N1	C2	N2	H18	0.4°	179.9°
C3'	C4'	O4'	C1'	25.4°	26.5°
C3'	C4'	O4'	C5'	123.3°	119.5°
C3'	C4'	O4'	H6	117.6°	119.5°
C3'	C4'	C5'	H6	121.7°	121.1°
C3'	C4'	C5'	O5'	68.2°	175.7°
C3'	C4'	C5'	H4	172.1°	64.3°
C3'	C4'	C5'	H5	51.6°	55.6°
C4'	C3'	O3'	H8	63.9°	180.0°
C4'	C3'	C2'	H9	123.0°	97.3°
O4'	C1'	N9	H11	119.8°	123.0°
C1'	O4'	C4'	C5'	148.7°	146.0°
O4'	C1'	N9	C4	177.3°	161.3°
O4'	C1'	N9	C8	2.3°	19.1°
C1'	O4'	C4'	H6	92.2°	93.0°
O4'	C1'	C2'	H9	108.1°	81.1°
N9	C1'	O4'	C4'	143.9°	158.5°
C1'	N9	C4	C8	179.7°	179.7°
C1'	N9	C4	C5	179.5°	179.9°
C1'	N9	C8	N7	179.5°	179.9°
N9	C1'	C2'	H9	10.6°	37.3°
C1'	N9	C8	H12	0.5°	0.0°
O4'	C4'	C5'	H6	119.7°	121.0°
O4'	C4'	C5'	O5'	50.5°	66.4°
O4'	C4'	C5'	H4	69.2°	53.6°
O4'	C4'	C5'	H5	170.2°	173.5°
O4'	C4'	C3'	H7	98.7°	116.7°
C4'	O4'	C1'	H11	96.9°	78.4°
C4'	C5'	O5'	H4	119.7°	119.9°
C4'	C5'	O5'	H5	119.7°	120.0°
C4'	C5'	O5'	PA	166.4°	179.9°
C4'	C5'	H4	H5	120.9°	120.0°
C5'	C4'	C3'	H7	20.9°	2.8°
N1	C6	C5	C4	0.1°	0.2°
N1	C6	C5	O6	179.7°	179.9°
N1	C6	C5	N7	179.7°	179.9°
N9	C4	C5	C6	180.0°	179.8°
N9	C4	C5	N7	0.2°	0.4°
C4	N9	C8	N7	0.2°	0.2°
C4	N9	C1'	H11	57.5°	38.3°
C4	N9	C8	H12	179.7°	179.7°
C5	C4	N9	C8	0.3°	0.4°
C4	C5	C6	N7	179.8°	179.7°
C4	C5	C6	O6	179.9°	179.7°
C4	C5	N7	C8	0.0°	0.3°
C4	C5	N7	CM7	179.9°	179.7°
N9	C8	N7	C5	0.1°	0.0°
N9	C8	N7	H12	180.0°	180.0°
N9	C8	N7	CM7	179.7°	180.0°
C8	N9	C1'	H11	122.2°	142.0°
C5'	O5'	PA	O3A	15.6°	175.0°
C5'	O5'	PA	O1A	104.6°	55.0°
C5'	O5'	PA	O2A	130.8°	65.0°
O5'	C5'	H4	H5	120.9°	120.1°
O5'	C5'	C4'	H6	170.1°	54.6°
C6	C5	N7	C8	179.9°	180.0°
C6	C5	N7	CM7	0.3°	0.0°
C5	C6	N1	H16	179.9°	180.0°
N7	C5	C6	O6	0.1°	0.0°
C5	N7	C8	CM7	179.8°	180.0°
C5	N7	C8	H12	179.9°	180.0°
C5	N7	CM7	H13	180.0°	90.0°
C5	N7	CM7	H14	60.0°	30.0°
C5	N7	CM7	H15	60.0°	150.0°
O6	C6	N1	H16	0.3°	0.1°
C8	N7	CM7	H13	0.2°	90.0°
C8	N7	CM7	H14	120.2°	150.0°
C8	N7	CM7	H15	119.8°	30.0°
O5'	PA	O3A	O1A	123.4°	120.0°
O5'	PA	O3A	O2A	116.1°	120.0°
O5'	PA	O1A	O2A	124.1°	120.0°
O5'	PA	O3A	PB	178.6°	165.0°
O5'	PA	O2A	H1	127.2°	60.0°
PA	O5'	C5'	H4	46.7°	60.0°
PA	O5'	C5'	H5	73.9°	60.0°
CM7	N7	C8	H12	0.3°	0.0°
N7	CM7	H13	H14	120.0°	120.1°
N7	CM7	H13	H15	120.0°	120.0°
N7	CM7	H14	H15	120.0°	120.0°
O3A	PA	O1A	O2A	119.2°	119.9°
PA	O3A	PB	O1B	117.4°	45.0°
PA	O3A	PB	O2B	120.2°	165.0°
PA	O3A	PB	O3B	4.8°	75.0°
O3A	PA	O2A	H1	120.4°	60.0°
O1A	PA	O3A	PB	58.0°	45.0°
O1A	PA	O2A	H1	0.0°	180.0°
O2A	PA	O3A	PB	62.5°	75.0°
O3A	PB	O1B	O2B	118.2°	120.1°
O3A	PB	O1B	O3B	118.3°	120.0°
O3A	PB	O2B	O3B	114.1°	120.0°
O3A	PB	O2B	H2	119.9°	180.0°
O3A	PB	O3B	H3	119.9°	60.0°
O1B	PB	O2B	O3B	126.0°	120.0°
O1B	PB	O2B	H2	0.0°	59.9°
O1B	PB	O3B	H3	0.0°	180.0°
O2B	PB	O3B	H3	126.1°	60.0°
O3B	PB	O2B	H2	126.0°	60.0°
H4	C5'	C4'	H6	50.4°	174.6°
H5	C5'	C4'	H6	70.1°	65.5°
H6	C4'	C3'	H7	142.8°	123.9°
H7	C3'	O3'	H8	57.7°	57.5°
H7	C3'	C2'	H9	5.7°	21.3°
H9	C2'	O2'	H10	58.0°	62.1°
H9	C2'	C1'	H11	132.4°	160.4°
H13	CM7	H14	H15	120.0°	119.9°

Release date:	2017-05-24
Definition date:	2017-02-13
Last modified:	2024-02-25
Release status:	OBS
Processing site:	EBI
Replaced by:	M7G
Derived from:	5N2V