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SummaryGeometryRelated PDB entries

6OT

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
N12S09sing1.66Å1.63Å
O11S09doub1.42Å1.44Å
S09C05sing1.76Å1.76Å
S09O10doub1.42Å1.44Å
CL7C01sing1.74Å1.72Å
C06C05doub1.38Å1.38ÅAromatic
C06C01sing1.38Å1.38ÅAromatic
C05C04sing1.38Å1.39ÅAromatic
C01C02doub1.38Å1.38ÅAromatic
C04C03doub1.38Å1.39ÅAromatic
C02C03sing1.38Å1.39ÅAromatic
C03CL8sing1.74Å1.73Å
N12H121sing0.97Å1.00Å
N12H122sing0.97Å1.00Å
C02H021sing1.08Å1.08Å
C04H041sing1.08Å1.08Å
C06H061sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
N12S09O11111.1°106.4°
N12S09C05109.8°107.2°
N12S09O10112.7°106.4°
S09N12H121109.5°120.1°
S09N12H122109.5°120.0°
O11S09C05110.5°106.4°
O11S09O10102.9°123.1°
C05S09O10109.8°106.4°
S09C05C06118.3°120.0°
S09C05C04121.3°120.0°
CL7C01C06118.5°120.0°
CL7C01C02120.8°120.0°
C05C06C01119.6°120.0°
C06C05C04120.4°120.0°
C05C06H061120.2°120.0°
C06C01C02120.7°120.0°
C01C06H061120.2°120.0°
C05C04C03119.7°120.0°
C05C04H041120.1°120.0°
C01C02C03119.6°120.0°
C01C02H021120.2°120.0°
C04C03C02119.9°120.0°
C04C03CL8120.3°120.0°
C03C04H041120.1°120.0°
C02C03CL8119.8°120.0°
C03C02H021120.2°120.0°
H121N12H122109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
N12S09O11C05122.1°114.1°
N12S09O11O10120.8°123.0°
N12S09C05O10124.4°113.5°
N12S09C05C0697.8°90.0°
N12S09C05C0482.3°90.0°
S09N12H121H122120.0°179.7°
O11S09C05O10112.8°132.9°
O11S09C05C0625.0°23.6°
O11S09C05C04154.9°156.5°
O11S09N12H121180.0°113.5°
O11S09N12H12260.0°66.2°
S09C05C06C04179.9°179.9°
S09C05C06C01179.6°180.0°
S09C05C04C03179.7°180.0°
C05S09N12H12157.5°0.0°
C05S09N12H12262.5°179.7°
S09C05C04H0410.3°0.0°
S09C05C06H0610.4°0.1°
O10S09C05C06137.8°156.5°
O10S09C05C0442.1°23.6°
O10S09N12H12165.2°113.6°
O10S09N12H122174.8°66.7°
CL7C01C06C05179.9°179.8°
CL7C01C06C02179.6°179.7°
CL7C01C02C03180.0°179.7°
CL7C01C02H0210.0°0.3°
CL7C01C06H0610.1°0.3°
C05C06C01H061180.0°179.9°
C05C06C01C020.3°0.1°
C06C05C04C030.2°0.0°
C06C05C04H041179.8°179.9°
C01C06C05C040.2°0.1°
C06C01C02C030.3°0.0°
C06C01C02H021179.6°180.0°
C05C04C03H041180.0°180.0°
C05C04C03C020.2°0.0°
C05C04C03CL8180.0°180.0°
C04C05C06H061179.8°180.0°
C01C02C03C040.3°0.0°
C01C02C03H021180.0°179.9°
C01C02C03CL8179.9°180.0°
C02C01C06H061179.7°180.0°
C04C03C02CL8179.8°180.0°
C04C03C02H021179.7°179.9°
C02C03C04H041179.8°180.0°
CL8C03C02H0210.1°0.0°
CL8C03C04H0410.0°0.1°

220113

PDB entries from 2024-05-22

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