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5YB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C26C28sing1.48Å1.54Å
C26O27doub1.22Å1.19Å
C26N25sing1.35Å1.44Å
C28C29doub1.40Å1.39ÅAromatic
C28C33sing1.40Å1.39ÅAromatic
C29C30sing1.38Å1.39ÅAromatic
C30C31doub1.40Å1.39ÅAromatic
C31C34sing1.48Å1.52Å
C31C32sing1.40Å1.39ÅAromatic
C32C33doub1.38Å1.38ÅAromatic
C34N36sing1.38Å1.43Å
C34N35doub1.30Å1.29Å
N25C24sing1.47Å1.49Å
C24C23sing1.53Å1.55Å
C23C21sing1.51Å1.60Å
C21O22doub1.21Å1.19Å
C21N20sing1.35Å1.46Å
N20C15sing1.46Å1.45Å
C15C16sing1.53Å1.51Å
C15C13sing1.51Å1.54Å
C13O14doub1.21Å1.20Å
C13N12sing1.35Å1.50Å
C16C17sing1.51Å1.55Å
C17O18doub1.21Å1.27Å
C17O19sing1.34Å1.26Å
N12C08sing1.46Å1.46Å
C08C07sing1.53Å1.56Å
C08C09sing1.51Å1.52Å
C09O10doub1.21Å1.27Å
C09O11sing1.34Å1.27Å
C07C04sing1.51Å1.58Å
C04C05doub1.38Å1.39ÅAromatic
C04C03sing1.38Å1.38ÅAromatic
C03C02doub1.38Å1.41ÅAromatic
C05C06sing1.38Å1.39ÅAromatic
C02C01sing1.38Å1.37ÅAromatic
C06C01doub1.38Å1.40ÅAromatic
C29H291sing1.08Å1.08Å
C30H301sing1.08Å1.08Å
C32H321sing1.08Å1.08Å
C33H331sing1.08Å1.08Å
N35H351sing0.97Å1.00Å
N36H362sing0.97Å1.00Å
N36H361sing0.97Å1.00Å
N25H251sing0.97Å1.00Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C23H232sing1.09Å1.10Å
C23H231sing1.09Å1.10Å
N20H201sing0.97Å1.00Å
C15H151sing1.09Å1.10Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
O19H2sing0.97Å0.95Å
N12H121sing0.97Å1.00Å
C08H081sing1.09Å1.10Å
O11H3sing0.97Å0.95Å
C07H071sing1.09Å1.10Å
C07H072sing1.09Å1.10Å
C03H031sing1.08Å1.08Å
C05H051sing1.08Å1.08Å
C02H021sing1.08Å1.08Å
C06H061sing1.08Å1.08Å
C01H011sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C28C26O27119.5°120.0°
C28C26N25121.0°120.0°
C26C28C29121.1°120.0°
C26C28C33118.6°120.0°
O27C26N25119.5°120.0°
C26N25C24118.3°120.0°
C26N25H251120.8°120.0°
C29C28C33120.3°120.0°
C28C29C30119.6°120.0°
C28C29H291120.2°120.0°
C28C33C32120.0°120.0°
C28C33H331120.0°120.0°
C29C30C31120.0°120.0°
C30C29H291120.2°120.0°
C29C30H301120.0°120.0°
C30C31C34120.3°120.0°
C30C31C32120.2°120.0°
C31C30H301120.0°119.9°
C34C31C32119.4°120.0°
C31C34N36119.7°120.0°
C31C34N35119.8°120.0°
C31C32C33119.9°120.0°
C31C32H321120.1°120.0°
C33C32H321120.1°120.0°
C32C33H331120.0°120.0°
N36C34N35120.5°120.0°
C34N36H362120.0°120.0°
C34N36H361120.0°120.0°
C34N35H351112.0°119.9°
N25C24C23111.9°109.5°
C24N25H251120.9°120.0°
N25C24H241108.9°109.5°
N25C24H242108.9°109.5°
C24C23C21110.0°109.5°
C23C24H241108.8°109.5°
C23C24H242108.9°109.5°
C24C23H232109.3°109.5°
C24C23H231109.4°109.5°
C23C21O22119.8°120.0°
C23C21N20121.0°120.0°
C21C23H232109.3°109.5°
C21C23H231109.3°109.5°
O22C21N20119.3°120.0°
C21N20C15118.2°120.0°
C21N20H201120.9°120.0°
N20C15C16111.2°109.5°
N20C15C13109.6°109.5°
C15N20H201120.9°120.0°
N20C15H151110.0°109.5°
C16C15C13108.1°109.4°
C15C16C17109.7°109.4°
C16C15H151109.1°109.5°
C15C16H161109.4°109.4°
C15C16H162109.4°109.4°
C15C13O14119.7°120.0°
C15C13N12120.0°120.0°
C13C15H151108.8°109.5°
O14C13N12120.3°120.0°
C13N12C08119.7°120.0°
C13N12H121120.2°120.0°
C16C17O18120.3°120.1°
C16C17O19119.6°120.0°
C17C16H161109.4°109.5°
C17C16H162109.4°109.5°
O18C17O19120.1°119.9°
C17O19H2109.5°117.1°
N12C08C07110.3°109.4°
N12C08C09109.1°109.5°
C08N12H121120.1°120.1°
N12C08H081109.6°109.5°
C07C08C09110.5°109.5°
C08C07C04114.4°109.5°
C07C08H081108.4°109.4°
C08C07H071108.3°109.5°
C08C07H072108.3°109.5°
C08C09O10119.9°120.0°
C08C09O11120.0°120.0°
C09C08H081108.8°109.5°
O10C09O11120.1°120.0°
C09O11H3109.5°117.0°
C07C04C05119.9°120.0°
C07C04C03120.2°120.0°
C04C07H071108.2°109.5°
C04C07H072108.2°109.5°
C05C04C03119.8°120.0°
C04C05C06120.1°120.0°
C04C05H051119.9°120.0°
C04C03C02120.1°120.0°
C04C03H031119.9°120.0°
C03C02C01119.9°120.0°
C02C03H031120.0°120.0°
C03C02H021120.0°120.0°
C05C06C01119.9°120.0°
C06C05H051119.9°120.0°
C05C06H061120.1°120.0°
C02C01C06120.1°120.0°
C01C02H021120.1°120.0°
C02C01H011120.0°120.0°
C01C06H061120.1°120.1°
C06C01H011119.9°120.0°
H362N36H361120.0°120.0°
H241C24H242109.5°109.5°
H232C23H231109.5°109.5°
H161C16H162109.4°109.6°
H071C07H072109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C28C26O27N25179.9°179.6°
C26C28C29C33179.8°179.8°
C26C28C29C30180.0°180.0°
C26C28C33C32179.9°179.7°
C28C26N25C24179.5°180.0°
C26C28C29H2910.0°0.0°
C26C28C33H3310.1°0.0°
C28C26N25H2510.5°0.0°
O27C26C28C29159.7°0.1°
O27C26C28C3320.1°179.7°
O27C26N25C240.5°0.3°
O27C26N25H251179.5°179.7°
N25C26C28C2920.3°179.7°
N25C26C28C33159.8°0.0°
C26N25C24H251180.0°180.0°
C26N25C24C23123.3°180.0°
C26N25C24H241116.4°60.0°
C26N25C24H2422.9°60.0°
C28C29C30H291180.0°180.0°
C28C29C30C310.2°0.0°
C29C28C33C320.1°0.6°
C28C29C30H301179.8°180.0°
C29C28C33H331179.9°179.8°
C33C28C29C300.1°0.3°
C28C33C32C310.1°0.6°
C28C33C32H331180.0°179.6°
C33C28C29H291179.9°179.8°
C28C33C32H321179.9°179.7°
C29C30C31H301180.0°180.0°
C29C30C31C34179.8°180.0°
C29C30C31C320.3°0.0°
C30C31C34C32179.9°180.0°
C30C31C32C330.2°0.3°
C30C31C34N3645.7°180.0°
C30C31C34N35134.4°0.0°
C31C30C29H291179.8°180.0°
C30C31C32H321179.8°179.9°
C34C31C32C33179.9°179.7°
C31C34N36N35179.9°180.0°
C34C31C30H3010.2°0.0°
C34C31C32H3210.1°0.0°
C31C34N35H351179.8°180.0°
C31C34N36H362179.8°0.0°
C31C34N36H3610.2°179.9°
C31C32C33H321180.0°179.7°
C32C31C34N36134.4°0.0°
C32C31C34N3545.5°180.0°
C32C31C30H301179.8°180.0°
C31C32C33H331179.9°179.8°
N36C34N35H3510.0°0.0°
C34N36H362H361180.0°179.9°
N35C34N36H3620.0°180.0°
N35C34N36H361180.0°0.0°
N25C24C23H241120.4°120.0°
N25C24C23H242120.4°120.0°
N25C24C23C21172.7°180.0°
N25C24H241H242118.9°120.0°
N25C24C23H23267.3°60.0°
N25C24C23H23152.6°60.0°
C24C23C21H232120.1°120.0°
C24C23C21H231120.1°120.0°
C24C23C21O221.8°0.0°
C24C23C21N20177.9°180.0°
C23C24N25H25156.7°0.0°
C23C24H241H242118.9°120.0°
C24C23H232H231119.8°120.0°
C23C21O22N20179.7°179.9°
C23C21N20C15179.8°175.1°
C21C23C24H24152.3°60.0°
C21C23C24H24267.0°60.0°
C21C23H232H231119.8°120.0°
C23C21N20H2010.2°4.9°
O22C21N20C150.1°4.9°
O22C21C23H232121.8°120.1°
O22C21C23H231118.3°120.0°
O22C21N20H201179.9°175.0°
C21N20C15H201180.0°180.0°
C21N20C15C16157.0°158.4°
C21N20C15C1383.5°81.7°
N20C21C23H23257.8°60.0°
N20C21C23H23162.1°60.0°
C21N20C15H15136.1°38.3°
N20C15C16C13120.3°120.0°
N20C15C16H151121.5°120.1°
N20C15C13H151120.3°120.0°
N20C15C13O1498.3°0.0°
N20C15C13N1282.0°180.0°
N20C15C16C17177.5°65.6°
N20C15C16H16157.5°54.3°
N20C15C16H16262.4°174.4°
C16C15C13H151118.4°120.0°
C16C15C13O1423.1°120.0°
C16C15C13N12156.7°60.0°
C15C16C17H161120.1°119.9°
C15C16C17H162120.1°119.9°
C15C16C17O18142.8°5.5°
C15C16C17O1936.8°174.5°
C16C15N20H20123.0°21.6°
C15C16H161H162119.9°120.0°
C15C13O14N12179.8°180.0°
C13C15C16C1762.2°174.4°
C15C13N12C08179.4°180.0°
C13C15N20H20196.5°98.4°
C13C15C16H161177.8°65.6°
C13C15C16H16257.9°54.4°
C15C13N12H1210.6°0.0°
O14C13N12C080.3°0.1°
O14C13C15H151141.4°120.0°
O14C13N12H121179.7°180.0°
C13N12C08H121180.0°179.9°
C13N12C08C0762.8°155.0°
C13N12C08C09175.7°85.0°
N12C13C15H15138.3°60.0°
C13N12C08H08156.5°35.1°
C16C17O18O19179.6°180.0°
C17C16C15H15156.0°54.4°
C17C16H161H162119.9°120.1°
C16C17O19H2179.6°180.0°
O18C17C16H16197.1°125.5°
O18C17C16H16222.8°114.4°
O18C17O19H20.0°0.0°
O19C17C16H16183.2°54.5°
O19C17C16H162156.9°65.6°
N12C08C07C09120.8°120.0°
N12C08C07H081120.0°120.0°
N12C08C09H081119.6°120.0°
N12C08C09O109.3°0.1°
N12C08C09O11170.4°180.0°
N12C08C07C0449.6°65.0°
N12C08C07H071170.4°55.0°
N12C08C07H07271.1°175.0°
C07C08C09H081118.9°120.0°
C07C08C09O10112.1°120.0°
C07C08C09O1168.1°60.0°
C08C07C04H071120.7°120.0°
C08C07C04H072120.8°120.0°
C08C07C04C05109.3°90.0°
C08C07C04C0371.3°89.7°
C07C08N12H121117.2°25.1°
C08C07H071H072117.8°120.0°
C08C09O10O11179.8°179.9°
C09C08C07C0471.1°175.0°
C09C08N12H1214.3°94.9°
C08C09O11H3179.7°180.0°
C09C08C07H07149.6°65.0°
C09C08C07H072168.1°55.0°
O10C09C08H081128.9°120.0°
O10C09O11H30.0°0.0°
O11C09C08H08150.8°60.0°
C07C04C05C03179.4°179.7°
C07C04C03C02179.7°180.0°
C07C04C05C06179.7°180.0°
C04C07C08H081169.7°55.0°
C04C07H071H072117.7°120.0°
C07C04C03H0310.2°0.0°
C07C04C05H0510.3°0.0°
C05C04C03C020.4°0.3°
C04C05C06H051180.0°180.0°
C04C05C06C010.1°0.0°
C05C04C07H071130.0°30.0°
C05C04C07H07211.5°150.0°
C05C04C03H031179.6°179.7°
C04C05C06H061179.9°180.0°
C04C03C02H031180.0°180.0°
C03C04C05C060.3°0.3°
C04C03C02C010.2°0.0°
C03C04C07H07149.4°150.3°
C03C04C07H072167.9°30.2°
C03C04C05H051179.7°179.7°
C04C03C02H021179.8°179.9°
C03C02C01H021180.0°179.9°
C03C02C01C060.0°0.2°
C03C02C01H011180.0°179.9°
C05C06C01C020.0°0.2°
C05C06C01H061180.0°180.0°
C05C06C01H011179.9°179.9°
C02C01C06H011180.0°179.8°
C01C02C03H031179.8°180.0°
C02C01C06H061180.0°179.8°
C01C06C05H051179.9°180.0°
C06C01C02H021180.0°179.8°
H291C29C30H3010.2°0.1°
H321C32C33H3310.1°0.0°
H251N25C24H24163.6°120.0°
H251N25C24H242177.1°120.0°
H241C24C23H232172.4°NaN°
H241C24C23H23167.7°60.0°
H242C24C23H23253.1°60.0°
H242C24C23H231173.0°180.0°
H201N20C15H151144.0°141.6°
H151C15C16H16164.0°174.4°
H151C15C16H162176.1°65.6°
H121N12C08H081123.5°145.0°
H081C08C07H07169.6°175.0°
H081C08C07H07248.9°65.0°
H031C03C02H0210.3°0.1°
H051C05C06H0610.1°0.0°
H021C02C01H0110.0°0.0°
H061C06C01H0110.1°0.1°

220472

PDB entries from 2024-05-29

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