0NZ
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O3 | C3 | sing | 1.43Å | 1.43Å | |
O4 | C4 | sing | 1.43Å | 1.43Å | |
C4 | C3 | sing | 1.53Å | 1.53Å | |
C4 | C5 | sing | 1.53Å | 1.53Å | |
C3 | C2 | sing | 1.53Å | 1.53Å | |
C6 | C5 | sing | 1.53Å | 1.53Å | |
C6 | O6 | sing | 1.43Å | 1.43Å | |
C5 | O5 | sing | 1.43Å | 1.43Å | |
C2 | C1 | sing | 1.53Å | 1.53Å | |
O5 | C1 | sing | 1.43Å | 1.44Å | |
O6 | P | sing | 1.61Å | 1.60Å | |
O1P | P | doub | 1.48Å | 1.48Å | |
C1 | O1 | sing | 1.43Å | 1.43Å | |
P | O2P | sing | 1.61Å | 1.62Å | |
P | O3P | sing | 1.61Å | 1.62Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C2 | H3A | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
C6 | H61 | sing | 1.09Å | 1.10Å | |
C6 | H62 | sing | 1.09Å | 1.10Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
O2P | H12 | sing | 0.97Å | 0.95Å | |
O3P | H13 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O3 | C3 | C4 | 109.6° | 109.6° |
O3 | C3 | C2 | 109.6° | 109.6° |
O3 | C3 | H3 | 109.6° | 109.6° |
C3 | O3 | HO3 | 109.5° | 114.0° |
O4 | C4 | C3 | 109.3° | 109.5° |
O4 | C4 | C5 | 109.7° | 109.5° |
O4 | C4 | H4 | 110.1° | 109.6° |
C4 | O4 | HO4 | 109.5° | 114.0° |
C3 | C4 | C5 | 110.2° | 109.2° |
C4 | C3 | C2 | 111.4° | 109.0° |
C4 | C3 | H3 | 108.3° | 109.5° |
C3 | C4 | H4 | 108.7° | 109.5° |
C4 | C5 | C6 | 111.3° | 109.5° |
C4 | C5 | O5 | 108.1° | 109.4° |
C5 | C4 | H4 | 108.8° | 109.5° |
C4 | C5 | H5 | 109.2° | 109.5° |
C3 | C2 | C1 | 110.2° | 109.2° |
C3 | C2 | H2 | 109.3° | 109.5° |
C3 | C2 | H3A | 109.3° | 109.6° |
C2 | C3 | H3 | 108.2° | 109.6° |
C5 | C6 | O6 | 110.3° | 109.5° |
C6 | C5 | O5 | 108.3° | 109.5° |
C6 | C5 | H5 | 109.3° | 109.5° |
C5 | C6 | H61 | 109.3° | 109.5° |
C5 | C6 | H62 | 109.3° | 109.4° |
C6 | O6 | P | 119.1° | 122.9° |
O6 | C6 | H61 | 109.2° | 109.5° |
O6 | C6 | H62 | 109.2° | 109.5° |
C5 | O5 | C1 | 110.2° | 114.1° |
O5 | C5 | H5 | 110.6° | 109.4° |
C2 | C1 | O5 | 110.3° | 109.4° |
C2 | C1 | O1 | 109.1° | 109.5° |
C2 | C1 | H1 | 108.8° | 109.5° |
C1 | C2 | H2 | 109.3° | 109.5° |
C1 | C2 | H3A | 109.3° | 109.5° |
O5 | C1 | O1 | 108.2° | 109.5° |
O5 | C1 | H1 | 110.2° | 109.4° |
O6 | P | O1P | 113.0° | 109.5° |
O6 | P | O2P | 106.9° | 109.5° |
O6 | P | O3P | 107.7° | 109.4° |
O1P | P | O2P | 111.5° | 109.5° |
O1P | P | O3P | 110.9° | 109.5° |
O1 | C1 | H1 | 110.2° | 109.5° |
C1 | O1 | HO1 | 109.5° | 114.0° |
O2P | P | O3P | 106.4° | 109.5° |
P | O2P | H12 | 109.5° | 114.0° |
P | O3P | H13 | 109.5° | 114.0° |
H2 | C2 | H3A | 109.5° | 109.5° |
H61 | C6 | H62 | 109.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O3 | C3 | C4 | O4 | 66.8° | 63.2° |
O3 | C3 | C4 | C2 | 121.5° | 120.0° |
O3 | C3 | C4 | H3 | 119.6° | 120.2° |
O3 | C3 | C4 | C5 | 172.6° | 176.9° |
O3 | C3 | C2 | H3 | 119.5° | 120.2° |
O3 | C3 | C2 | C1 | 169.6° | 176.9° |
O3 | C3 | C2 | H2 | 49.5° | 63.1° |
O3 | C3 | C2 | H3A | 70.3° | 57.0° |
O3 | C3 | C4 | H4 | 53.4° | 57.0° |
O4 | C4 | C3 | C5 | 120.7° | 119.9° |
O4 | C4 | C3 | H4 | 120.2° | 120.2° |
O4 | C4 | C5 | H4 | 120.5° | 120.2° |
O4 | C4 | C3 | C2 | 171.7° | 176.9° |
O4 | C4 | C5 | C6 | 61.0° | 62.5° |
O4 | C4 | C5 | O5 | 179.8° | 177.5° |
O4 | C4 | C3 | H3 | 52.8° | 57.0° |
O4 | C4 | C5 | H5 | 59.8° | 57.6° |
C3 | C4 | C5 | H4 | 119.1° | 119.9° |
C4 | C3 | C2 | H3 | 119.0° | 119.8° |
C3 | C4 | C5 | C6 | 178.6° | 177.6° |
C3 | C4 | C5 | O5 | 59.7° | 57.6° |
C4 | C3 | C2 | C1 | 48.1° | 57.0° |
C4 | C3 | C2 | H2 | 72.0° | 176.9° |
C4 | C3 | C2 | H3A | 168.2° | 63.0° |
C3 | C4 | C5 | H5 | 60.6° | 62.4° |
C4 | C3 | O3 | HO3 | 180.0° | 179.6° |
C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
C5 | C4 | C3 | C2 | 51.1° | 57.0° |
C4 | C5 | C6 | O5 | 118.7° | 120.0° |
C4 | C5 | C6 | H5 | 120.7° | 120.0° |
C4 | C5 | C6 | O6 | 178.3° | 175.0° |
C4 | C5 | O5 | H5 | 119.5° | 120.0° |
C4 | C5 | O5 | C1 | 67.7° | 61.1° |
C5 | C4 | C3 | H3 | 67.9° | 62.9° |
C4 | C5 | C6 | H61 | 58.2° | 55.0° |
C4 | C5 | C6 | H62 | 61.5° | 65.0° |
C5 | C4 | O4 | HO4 | 59.0° | 179.7° |
C3 | C2 | C1 | H2 | 120.1° | 119.9° |
C3 | C2 | C1 | H3A | 120.1° | 120.0° |
C3 | C2 | C1 | O5 | 54.8° | 57.6° |
C3 | C2 | C1 | O1 | 173.5° | 177.6° |
C3 | C2 | C1 | H1 | 66.2° | 62.3° |
C3 | C2 | H2 | H3A | 119.7° | 120.2° |
C2 | C3 | C4 | H4 | 68.1° | 62.9° |
C2 | C3 | O3 | HO3 | 57.5° | 60.0° |
C5 | C6 | O6 | H61 | 120.2° | 120.0° |
C5 | C6 | O6 | H62 | 120.2° | 120.0° |
C6 | C5 | O5 | H5 | 119.8° | 120.0° |
C6 | C5 | O5 | C1 | 171.6° | 178.9° |
C5 | C6 | O6 | P | 80.5° | 180.0° |
C6 | C5 | C4 | H4 | 59.5° | 57.7° |
C5 | C6 | H61 | H62 | 119.6° | 119.9° |
O6 | C6 | C5 | O5 | 63.0° | 65.0° |
C6 | O6 | P | O1P | 39.1° | 55.0° |
C6 | O6 | P | O2P | 162.1° | 65.1° |
C6 | O6 | P | O3P | 83.8° | 175.0° |
O6 | C6 | C5 | H5 | 57.6° | 55.0° |
O6 | C6 | H61 | H62 | 119.6° | 120.1° |
C5 | O5 | C1 | C2 | 65.9° | 61.1° |
C5 | O5 | C1 | O1 | 174.8° | 178.9° |
C5 | O5 | C1 | H1 | 54.3° | 58.9° |
O5 | C5 | C4 | H4 | 59.4° | 62.3° |
O5 | C5 | C6 | H61 | 176.9° | 175.0° |
O5 | C5 | C6 | H62 | 57.2° | 55.0° |
C2 | C1 | O5 | O1 | 119.3° | 120.0° |
C2 | C1 | O5 | H1 | 120.2° | 120.0° |
C2 | C1 | O1 | H1 | 119.4° | 120.1° |
C1 | C2 | H2 | H3A | 119.7° | 120.1° |
C1 | C2 | C3 | H3 | 70.8° | 62.8° |
C2 | C1 | O1 | HO1 | 180.0° | 180.0° |
O5 | C1 | O1 | H1 | 120.5° | 120.0° |
O5 | C1 | C2 | H2 | 65.3° | 177.5° |
O5 | C1 | C2 | H3A | 174.9° | 62.4° |
C1 | O5 | C5 | H5 | 51.8° | 58.9° |
O5 | C1 | O1 | HO1 | 60.0° | 60.0° |
O6 | P | O1P | O2P | 120.5° | 120.0° |
O6 | P | O1P | O3P | 121.1° | 120.0° |
O6 | P | O2P | O3P | 115.0° | 119.9° |
P | O6 | C6 | H61 | 39.7° | 60.0° |
P | O6 | C6 | H62 | 159.4° | 60.0° |
O6 | P | O2P | H12 | 124.0° | 60.0° |
O6 | P | O3P | H13 | 124.1° | 180.0° |
O1P | P | O2P | O3P | 121.1° | 120.0° |
O1P | P | O2P | H12 | 0.0° | 180.0° |
O1P | P | O3P | H13 | 0.0° | 60.0° |
O1 | C1 | C2 | H2 | 53.4° | 62.5° |
O1 | C1 | C2 | H3A | 66.3° | 57.6° |
O2P | P | O3P | H13 | 121.4° | 60.1° |
O3P | P | O2P | H12 | 121.1° | 60.0° |
H1 | C1 | C2 | H2 | 173.7° | 57.6° |
H1 | C1 | C2 | H3A | 53.9° | 177.7° |
H1 | C1 | O1 | HO1 | 60.6° | 59.9° |
H2 | C2 | C3 | H3 | 169.1° | 57.1° |
H3A | C2 | C3 | H3 | 49.3° | 177.2° |
H3 | C3 | C4 | H4 | 173.0° | 177.2° |
H3 | C3 | O3 | HO3 | 61.2° | 60.3° |
H4 | C4 | C5 | H5 | 179.8° | 177.7° |
H4 | C4 | O4 | HO4 | 60.7° | 60.1° |
H5 | C5 | C6 | H61 | 62.6° | 65.1° |
H5 | C5 | C6 | H62 | 177.7° | 175.0° |