Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_900021

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3CC3Csing1.43Å1.42Å
O4CC4Csing1.43Å1.41Å
C3CC4Csing1.53Å1.53Å
C3CC2Csing1.53Å1.53Å
C4CC5Csing1.53Å1.53Å
O2CC2Csing1.43Å1.42Å
C2CC1Csing1.53Å1.53Å
O6CC6Csing1.43Å1.39Å
C5CC6Csing1.53Å1.54Å
C5CO5Csing1.43Å1.41Å
C1CO5Csing1.43Å1.42Å
C1CO4Bsing1.43Å1.43Å
O4BC4Bsing1.43Å1.44Å
C6BO6Bsing1.43Å1.42Å
C6BC5Bsing1.53Å1.53Å
C4BC5Bsing1.53Å1.51Å
C4BC3Bsing1.53Å1.53Å
C5BO5Bsing1.43Å1.40Å
O3BC3Bsing1.43Å1.42Å
C3BC2Bsing1.53Å1.53Å
O5BC1Bsing1.43Å1.46Å
C2BC1Bsing1.53Å1.50Å
C2BO2Bsing1.43Å1.44Å
C1BO4Asing1.43Å1.41Å
O3AC3Asing1.43Å1.42Å
O6AC6Asing1.43Å1.42Å
O4AC4Asing1.43Å1.41Å
C4AC3Asing1.53Å1.54Å
C4AC5Asing1.53Å1.52Å
C3AC2Asing1.53Å1.52Å
C6AC5Asing1.53Å1.52Å
C2AO2Asing1.43Å1.42Å
C2AC1Asing1.53Å1.51Å
C5AO5Asing1.43Å1.42Å
O5AC1Asing1.43Å1.41Å
C1AO1Xsing1.43Å1.40Å
C1AH1Asing1.09Å1.10Å
C2AH2Asing1.09Å1.10Å
C3AH3Asing1.09Å1.10Å
C4AH4Asing1.09Å1.10Å
C5AH5Asing1.09Å1.10Å
C6AH6A1sing1.09Å1.10Å
C6AH6A2sing1.09Å1.10Å
O1XH1Xsing0.97Å0.95Å
O2AHOA2sing0.97Å0.95Å
O3AHOA3sing0.97Å0.95Å
O6AHOA6sing0.97Å0.95Å
C1BH1Bsing1.09Å1.10Å
C2BH2Bsing1.09Å1.10Å
C3BH3Bsing1.09Å1.10Å
C4BH4Bsing1.09Å1.10Å
C5BH5Bsing1.09Å1.10Å
C6BH6B1sing1.09Å1.10Å
C6BH6B2sing1.09Å1.10Å
O2BHOB2sing0.97Å0.95Å
O3BHOB3sing0.97Å0.95Å
O6BHOB6sing0.97Å0.95Å
C1CH1Csing1.09Å1.10Å
C2CH2Csing1.09Å1.10Å
C3CH3Csing1.09Å1.10Å
C4CH4Csing1.09Å1.10Å
C5CH5Csing1.09Å1.10Å
C6CH6C1sing1.09Å1.10Å
C6CH6C2sing1.09Å1.10Å
O2CHOC2sing0.97Å0.95Å
O3CHOC3sing0.97Å0.95Å
O4CHOC4sing0.97Å0.95Å
O6CHOC6sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O3CC3CC4C107.0°109.5°
O3CC3CC2C113.8°109.6°
O3CC3CH3C109.4°109.6°
C3CO3CHOC3109.5°114.0°
O4CC4CC3C109.1°109.5°
O4CC4CC5C110.2°109.5°
O4CC4CH4C110.1°109.5°
C4CO4CHOC4109.5°114.0°
C4CC3CC2C110.7°109.0°
C3CC4CC5C110.5°109.2°
C4CC3CH3C107.9°109.5°
C3CC4CH4C108.5°109.5°
C3CC2CO2C110.2°109.5°
C3CC2CC1C107.8°109.2°
C3CC2CH2C108.7°109.5°
C2CC3CH3C107.9°109.6°
C4CC5CC6C114.2°109.5°
C4CC5CO5C109.1°109.4°
C5CC4CH4C108.5°109.6°
C4CC5CH5C108.1°109.5°
O2CC2CC1C111.1°109.5°
O2CC2CH2C110.2°109.5°
C2CO2CHOC2109.5°114.0°
C2CC1CO5C108.0°109.4°
C2CC1CO4B110.0°109.5°
C2CC1CH1C111.4°109.6°
C1CC2CH2C108.7°109.6°
O6CC6CC5C112.2°109.4°
O6CC6CH6C1108.8°109.5°
O6CC6CH6C2108.8°109.5°
C6CO6CHOC6109.5°114.0°
C6CC5CO5C107.6°109.5°
C6CC5CH5C108.0°109.5°
C5CC6CH6C1108.8°109.4°
C5CC6CH6C2108.8°109.5°
C5CO5CC1C115.1°114.1°
O5CC5CH5C109.7°109.5°
O5CC1CO4B100.9°109.5°
O5CC1CH1C113.1°109.5°
C1CO4BC4B114.5°114.0°
O4BC1CH1C112.9°109.4°
O4BC4BC5B107.8°109.5°
O4BC4BC3B111.4°109.6°
O4BC4BH4B110.3°109.6°
O6BC6BC5B109.2°109.5°
O6BC6BH6B1109.5°109.5°
O6BC6BH6B2109.5°109.5°
C6BO6BHOB6109.5°114.0°
C6BC5BC4B114.0°109.5°
C6BC5BO5B110.7°109.5°
C6BC5BH5B108.5°109.5°
C5BC6BH6B1109.5°109.5°
C5BC6BH6B2109.5°109.4°
C5BC4BC3B109.1°109.2°
C4BC5BO5B104.8°109.4°
C5BC4BH4B109.3°109.4°
C4BC5BH5B108.7°109.4°
C4BC3BO3B112.1°109.6°
C4BC3BC2B115.7°109.0°
C4BC3BH3B105.8°109.5°
C3BC4BH4B109.1°109.6°
C5BO5BC1B114.6°114.1°
O5BC5BH5B110.2°109.5°
O3BC3BC2B109.7°109.6°
O3BC3BH3B107.0°109.6°
C3BO3BHOB3109.5°113.9°
C3BC2BC1B104.2°109.2°
C3BC2BO2B113.0°109.5°
C3BC2BH2B108.9°109.6°
C2BC3BH3B105.8°109.5°
O5BC1BC2B107.7°109.4°
O5BC1BO4A102.8°109.5°
O5BC1BH1B112.1°109.5°
C1BC2BO2B111.1°109.6°
C2BC1BO4A109.6°109.5°
C2BC1BH1B111.4°109.4°
C1BC2BH2B109.3°109.5°
O2BC2BH2B110.2°109.5°
C2BO2BHOB2109.5°114.0°
C1BO4AC4A111.9°114.0°
O4AC1BH1B112.9°109.5°
O3AC3AC4A112.4°109.7°
O3AC3AC2A108.9°109.5°
O3AC3AH3A109.5°109.5°
C3AO3AHOA3109.5°114.0°
O6AC6AC5A114.9°109.5°
O6AC6AH6A1108.1°109.5°
O6AC6AH6A2108.1°109.4°
C6AO6AHOA6109.5°114.0°
O4AC4AC3A107.8°109.5°
O4AC4AC5A109.3°109.6°
O4AC4AH4A110.6°109.6°
C3AC4AC5A111.4°109.2°
C4AC3AC2A109.8°109.0°
C4AC3AH3A107.9°109.6°
C3AC4AH4A108.8°109.5°
C4AC5AC6A110.1°109.4°
C4AC5AO5A109.1°109.4°
C5AC4AH4A109.0°109.6°
C4AC5AH5A109.0°109.5°
C3AC2AO2A108.4°109.5°
C3AC2AC1A110.8°109.1°
C3AC2AH2A108.4°109.5°
C2AC3AH3A108.2°109.5°
C6AC5AO5A109.3°109.5°
C6AC5AH5A109.0°109.5°
C5AC6AH6A1108.1°109.5°
C5AC6AH6A2108.1°109.5°
O2AC2AC1A111.1°109.6°
O2AC2AH2A109.7°109.6°
C2AO2AHOA2109.5°114.0°
C2AC1AO5A109.4°109.4°
C2AC1AO1X108.0°109.4°
C2AC1AH1A109.3°109.4°
C1AC2AH2A108.4°109.5°
C5AO5AC1A112.1°114.1°
O5AC5AH5A110.3°109.5°
O5AC1AO1X108.3°109.5°
O5AC1AH1A110.8°109.5°
O1XC1AH1A111.0°109.5°
C1AO1XH1X109.5°114.0°
H6A1C6AH6A2109.5°109.5°
H6B1C6BH6B2109.5°109.5°
H6C1C6CH6C2109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3CC3CC4CO4C61.4°63.2°
O3CC3CC4CC2C124.6°119.9°
O3CC3CC4CH3C117.6°120.2°
O3CC3CC2CH3C121.6°120.3°
O3CC3CC4CC5C177.3°176.9°
O3CC3CC2CO2C62.4°63.2°
O3CC3CC2CC1C176.1°176.9°
O3CC3CC2CH2C58.4°56.9°
O3CC3CC4CH4C58.5°56.9°
O4CC4CC3CC5C121.3°119.9°
O4CC4CC3CH4C119.9°120.1°
O4CC4CC3CC2C174.0°176.9°
O4CC4CC5CH4C120.6°120.1°
O4CC4CC5CC6C65.9°62.5°
O4CC4CC5CO5C173.7°177.5°
O4CC4CC3CH3C56.2°57.1°
O4CC4CC5CH5C54.4°57.6°
C4CC3CC2CH3C117.8°119.8°
C3CC4CC5CH4C118.8°119.9°
C4CC3CC2CO2C177.0°176.9°
C4CC3CC2CC1C55.6°57.0°
C3CC4CC5CC6C173.5°177.6°
C3CC4CC5CO5C53.1°57.6°
C4CC3CC2CH2C62.1°63.0°
C3CC4CC5CH5C66.2°62.4°
C4CC3CO3CHOC3180.0°180.0°
C3CC4CO4CHOC4180.0°60.0°
C2CC3CC4CC5C52.8°57.0°
C3CC2CO2CC1C119.4°119.7°
C3CC2CO2CH2C120.0°120.1°
C3CC2CC1CH2C117.7°120.0°
C3CC2CC1CO5C59.5°57.6°
C3CC2CC1CO4B168.7°177.6°
C3CC2CC1CH1C65.3°62.4°
C2CC3CC4CH4C66.1°63.0°
C3CC2CO2CHOC2180.0°179.7°
C2CC3CO3CHOC357.4°60.4°
C4CC5CC6CO6C63.4°175.0°
C4CC5CC6CO5C121.2°119.9°
C4CC5CC6CH5C120.4°120.0°
C4CC5CO5CH5C118.3°120.0°
C4CC5CO5CC1C61.9°61.2°
C5CC4CC3CH3C65.1°62.9°
C4CC5CC6CH6C157.0°55.0°
C4CC5CC6CH6C2176.2°65.0°
C5CC4CO4CHOC458.6°179.7°
O2CC2CC1CH2C121.5°120.1°
O2CC2CC1CO5C179.7°177.6°
O2CC2CC1CO4B70.5°62.5°
O2CC2CC1CH1C55.5°57.6°
O2CC2CC3CH3C59.2°57.1°
C2CC1CO5CC5C65.7°61.2°
C2CC1CO5CO4B115.4°120.0°
C2CC1CO5CH1C123.8°120.1°
C2CC1CO4BH1C125.2°120.1°
C2CC1CO4BC4B152.9°175.1°
C1CC2CC3CH3C62.3°62.8°
C1CC2CO2CHOC260.6°60.0°
O6CC6CC5CH6C1120.4°120.0°
O6CC6CC5CH6C2120.4°120.0°
O6CC6CC5CO5C57.8°65.0°
O6CC6CC5CH5C176.2°55.0°
O6CC6CH6C1H6C2118.8°120.0°
C6CC5CO5CH5C117.3°120.0°
C6CC5CO5CC1C173.7°178.9°
C6CC5CC4CH4C54.7°57.6°
C5CC6CH6C1H6C2118.8°120.0°
C5CC6CO6CHOC6180.0°180.0°
C5CO5CC1CO4B178.9°178.8°
C5CO5CC1CH1C58.0°58.9°
O5CC5CC4CH4C65.7°62.3°
O5CC5CC6CH6C1178.2°174.9°
O5CC5CC6CH6C262.5°54.9°
O5CC1CO4BH1C121.0°120.0°
O5CC1CO4BC4B93.3°64.9°
O5CC1CC2CH2C58.2°62.3°
C1CO5CC5CH5C56.4°58.8°
C1CO4BC4BC5B116.8°150.0°
C1CO4BC4BC3B123.7°90.3°
C1CO4BC4BH4B2.4°29.9°
O4BC1CC2CH2C51.0°57.7°
O4BC4BC5BC6B62.8°62.4°
O4BC4BC5BC3B121.0°119.9°
O4BC4BC5BH4B119.8°120.1°
O4BC4BC3BH4B121.9°120.2°
O4BC4BC5BO5B176.1°177.5°
O4BC4BC3BO3B60.6°63.2°
O4BC4BC3BC2B172.5°176.9°
O4BC4BC3BH3B55.7°57.1°
O4BC4BC5BH5B58.3°57.6°
C4BO4BC1CH1C27.7°55.0°
O6BC6BC5BH6B1119.9°120.0°
O6BC6BC5BH6B2119.9°120.0°
O6BC6BC5BC4B56.9°175.0°
O6BC6BC5BO5B60.9°65.0°
O6BC6BC5BH5B178.2°55.0°
O6BC6BH6B1H6B2120.1°120.1°
C6BC5BC4BO5B121.1°120.0°
C6BC5BC4BH5B121.1°120.0°
C6BC5BC4BC3B176.2°177.6°
C6BC5BO5BH5B119.9°120.0°
C6BC5BO5BC1B168.3°178.8°
C6BC5BC4BH4B57.1°57.7°
C5BC6BH6B1H6B2120.1°119.9°
C5BC6BO6BHOB6180.0°180.0°
C5BC4BC3BH4B119.3°119.9°
C4BC5BO5BH5B116.7°119.9°
C5BC4BC3BO3B179.4°176.9°
C5BC4BC3BC2B53.7°57.0°
C4BC5BO5BC1B68.3°61.1°
C5BC4BC3BH3B63.1°62.8°
C4BC5BC6BH6B163.0°55.0°
C4BC5BC6BH6B2176.9°65.0°
C3BC4BC5BO5B55.1°57.6°
C4BC3BO3BC2B130.1°119.6°
C4BC3BO3BH3B115.6°120.2°
C4BC3BC2BH3B116.8°119.8°
C4BC3BC2BC1B53.4°57.0°
C4BC3BC2BO2B174.1°176.9°
C4BC3BC2BH2B63.2°62.9°
C3BC4BC5BH5B62.7°62.3°
C4BC3BO3BHOB3180.0°179.6°
C5BO5BC1BC2B72.4°61.1°
C5BO5BC1BO4A172.0°178.9°
C5BO5BC1BH1B50.5°58.8°
O5BC5BC4BH4B64.1°62.3°
O5BC5BC6BH6B1179.2°175.0°
O5BC5BC6BH6B259.1°55.0°
O3BC3BC2BH3B115.1°120.3°
O3BC3BC2BC1B178.5°176.9°
O3BC3BC2BO2B57.8°63.2°
O3BC3BC2BH2B65.0°57.0°
O3BC3BC4BH4B61.3°57.0°
C3BC2BC1BO5B57.0°57.6°
C3BC2BC1BO2B122.0°119.9°
C3BC2BC1BH2B116.3°120.0°
C3BC2BO2BH2B122.1°120.2°
C3BC2BC1BO4A168.1°177.6°
C3BC2BC1BH1B66.3°62.4°
C2BC3BC4BH4B65.6°62.9°
C3BC2BO2BHOB2180.0°179.7°
C2BC3BO3BHOB349.9°60.1°
O5BC1BC2BO4A111.1°120.0°
O5BC1BC2BH1B123.3°120.0°
O5BC1BC2BO2B179.0°177.5°
O5BC1BO4AH1B121.0°120.1°
O5BC1BO4AC4A79.0°65.1°
O5BC1BC2BH2B59.2°62.3°
C1BO5BC5BH5B48.4°58.8°
C1BC2BO2BH2B121.2°120.1°
C2BC1BO4AH1B124.8°120.0°
C2BC1BO4AC4A166.7°175.0°
C1BC2BC3BH3B63.4°62.8°
C1BC2BO2BHOB263.3°59.9°
O2BC2BC1BO4A69.9°62.5°
O2BC2BC1BH1B55.7°57.5°
O2BC2BC3BH3B57.3°57.1°
C1BO4AC4AC3A118.3°90.0°
C1BO4AC4AC5A120.5°150.3°
C1BO4AC4AH4A0.6°30.1°
O4AC1BC2BH2B51.9°57.6°
O3AC3AC4AO4A69.4°63.2°
O3AC3AC4AC2A121.4°119.9°
O3AC3AC4AH3A120.9°120.3°
O3AC3AC4AC5A170.7°176.9°
O3AC3AC2AH3A118.9°120.2°
O3AC3AC2AO2A63.9°63.1°
O3AC3AC2AC1A173.9°176.9°
O3AC3AC2AH2A55.1°57.1°
O3AC3AC4AH4A50.6°56.9°
O6AC6AC5AC4A54.3°175.0°
O6AC6AC5AH6A1120.8°120.0°
O6AC6AC5AH6A2120.8°119.9°
O6AC6AC5AO5A65.5°65.0°
O6AC6AC5AH5A173.8°55.0°
O6AC6AH6A1H6A2117.5°119.9°
O4AC4AC3AC5A119.9°119.9°
O4AC4AC3AH4A120.0°120.1°
O4AC4AC5AH4A120.9°120.2°
O4AC4AC3AC2A169.2°176.9°
O4AC4AC5AC6A66.0°62.5°
O4AC4AC5AO5A174.1°177.5°
O4AC4AC3AH3A51.5°57.1°
O4AC4AC5AH5A53.5°57.5°
C4AO4AC1BH1B42.0°55.0°
C3AC4AC5AH4A120.0°119.9°
C4AC3AC2AH3A117.5°119.9°
C3AC4AC5AC6A174.9°177.6°
C4AC3AC2AO2A172.5°176.9°
C4AC3AC2AC1A50.4°56.9°
C3AC4AC5AO5A55.0°57.6°
C4AC3AC2AH2A68.5°62.9°
C3AC4AC5AH5A65.5°62.4°
C4AC3AO3AHOA3180.0°179.6°
C5AC4AC3AC2A49.3°57.0°
C4AC5AC6AO5A119.8°120.0°
C4AC5AC6AH5A119.5°120.0°
C4AC5AO5AH5A119.7°120.0°
C4AC5AO5AC1A64.2°61.2°
C5AC4AC3AH3A68.4°62.9°
C4AC5AC6AH6A166.5°55.0°
C4AC5AC6AH6A2175.1°65.1°
C3AC2AO2AC1A122.0°119.7°
C3AC2AO2AH2A118.2°120.2°
C3AC2AC1AH2A118.8°119.9°
C3AC2AC1AO5A58.2°57.6°
C3AC2AC1AO1X175.8°177.6°
C3AC2AC1AH1A63.3°62.5°
C2AC3AC4AH4A70.8°63.0°
C3AC2AO2AHOA2180.0°179.7°
C2AC3AO3AHOA358.1°60.0°
C6AC5AO5AH5A119.9°120.1°
C6AC5AO5AC1A175.4°178.9°
C6AC5AC4AH4A54.9°57.7°
C5AC6AH6A1H6A2117.5°120.0°
C5AC6AO6AHOA6180.0°179.9°
O2AC2AC1AH2A120.6°120.2°
O2AC2AC1AO5A178.8°177.5°
O2AC2AC1AO1X63.6°62.5°
O2AC2AC1AH1A57.3°57.5°
O2AC2AC3AH3A55.0°57.0°
C2AC1AO5AC5A65.9°61.2°
C2AC1AO5AO1X117.4°120.0°
C2AC1AO5AH1A120.6°120.0°
C2AC1AO1XH1A119.8°119.9°
C1AC2AC3AH3A67.1°62.9°
C2AC1AO1XH1X180.0°180.0°
C1AC2AO2AHOA258.1°60.1°
C5AO5AC1AO1X176.6°178.9°
C5AO5AC1AH1A54.7°58.8°
O5AC5AC4AH4A65.0°62.3°
O5AC5AC6AH6A1173.7°174.9°
O5AC5AC6AH6A255.3°54.9°
O5AC1AO1XH1A121.9°120.1°
O5AC1AC2AH2A60.6°62.3°
C1AO5AC5AH5A55.5°58.8°
O5AC1AO1XH1X61.7°60.0°
O1XC1AC2AH2A57.0°57.7°
H1AC1AC2AH2A177.9°177.7°
H1AC1AO1XH1X60.2°60.1°
H2AC2AC3AH3A174.0°177.2°
H2AC2AO2AHOA261.8°60.1°
H3AC3AC4AH4A171.5°177.2°
H3AC3AO3AHOA360.0°60.2°
H4AC4AC5AH5A174.4°177.7°
H5AC5AC6AH6A153.0°65.0°
H5AC5AC6AH6A265.4°175.0°
H6A1C6AO6AHOA659.2°60.0°
H6A2C6AO6AHOA659.3°60.0°
H1BC1BC2BH2B177.5°177.7°
H2BC2BC3BH3B179.9°177.3°
H2BC2BO2BHOB257.9°60.2°
H3BC3BC4BH4B177.6°177.3°
H3BC3BO3BHOB364.4°60.2°
H4BC4BC5BH5B178.2°177.7°
H5BC5BC6BH6B158.2°65.0°
H5BC5BC6BH6B261.9°175.0°
H6B1C6BO6BHOB660.0°60.0°
H6B2C6BO6BHOB660.1°60.0°
H1CC1CC2CH2C177.0°177.7°
H2CC2CC3CH3C180.0°177.2°
H2CC2CO2CHOC260.0°60.1°
H3CC3CC4CH4C176.1°177.2°
H3CC3CO3CHOC363.4°59.8°
H4CC4CC5CH5C175.0°177.7°
H4CC4CO4CHOC461.1°60.2°
H5CC5CC6CH6C163.4°65.1°
H5CC5CC6CH6C255.8°174.9°
H6C1C6CO6CHOC659.6°60.0°
H6C2C6CO6CHOC659.6°60.1°

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon