Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

PRD_000372

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
NCAsing1.47Å1.46Å
NC2sing1.35Å1.32Å
NHsing0.97Å1.00Å
CACBsing1.53Å1.54Å
CACsing1.51Å1.52Å
CAHAsing1.09Å1.10Å
CBCGsing1.53Å1.53Å
CBHB2sing1.09Å1.10Å
CBHB3sing1.09Å1.10Å
CGCD1sing1.53Å1.52Å
CGCD2sing1.53Å1.52Å
CGHGsing1.09Å1.10Å
CD1HD11sing1.09Å1.10Å
CD1HD12sing1.09Å1.10Å
CD1HD13sing1.09Å1.10Å
CD2HD21sing1.09Å1.10Å
CD2HD22sing1.09Å1.10Å
CD2HD23sing1.09Å1.10Å
COdoub1.21Å1.24Å
C2O3doub1.22Å1.23Å
C2C4sing1.47Å1.32Å
C4O8sing1.35Å1.34ÅAromatic
C4C5doub1.36Å1.37ÅAromatic
O8C7sing1.34Å1.38ÅAromatic
C5C6sing1.40Å1.37ÅAromatic
C5H5sing1.08Å1.08Å
C6C7doub1.35Å1.39ÅAromatic
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
N1CA1sing1.47Å1.48Å
N1C9sing1.47Å1.57Å
CA1CB1sing1.53Å1.54Å
CA1C1sing1.51Å1.54Å
CA1HA1sing1.09Å1.10Å
CB1CG1sing1.51Å1.43Å
CB1HB1sing1.09Å1.10Å
CB1HB21sing1.09Å1.10Å
CG1CD21sing1.45Å1.43ÅAromatic
CG1CD11doub1.35Å1.33ÅAromatic
CD21CE2doub1.42Å1.41ÅAromatic
CD21CE3sing1.40Å1.40ÅAromatic
CE2NE1sing1.37Å1.37ÅAromatic
CE2CZ2sing1.39Å1.40ÅAromatic
CE3CZ3doub1.37Å1.39ÅAromatic
CE3HE3sing1.08Å1.08Å
CD11NE1sing1.37Å1.37ÅAromatic
CD11C9sing1.52Å1.66Å
NE1HNEsing0.97Å1.00Å
CZ2CH2doub1.38Å1.37ÅAromatic
CZ2HZ2sing1.08Å1.08Å
CZ3CH2sing1.39Å1.41ÅAromatic
CZ3HZ3sing1.08Å1.08Å
CH2HH2sing1.08Å1.08Å
C9H91sing1.09Å1.10Å
C9H92sing1.09Å1.10Å
C1O2sing1.34Å1.25Å
C1O1doub1.21Å1.26Å
O2HO2sing0.97Å0.95Å
CN1sing1.35Å1.33Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CANC2120.5°120.0°
CANH119.8°120.0°
NCACB110.5°109.5°
NCAC107.5°109.5°
NCAHA109.8°109.4°
C2NH119.7°120.0°
NC2O3120.6°120.0°
NC2C4119.7°120.0°
CBCAC108.6°109.5°
CBCAHA108.7°109.5°
CACBCG122.9°109.5°
CACBHB2105.2°109.5°
CACBHB3102.0°109.5°
CCAHA111.7°109.5°
CACO119.7°120.0°
CACN1117.4°120.0°
CGCBHB2105.2°109.5°
CGCBHB3102.0°109.5°
CBCGCD1111.2°109.5°
CBCGCD2108.8°109.5°
CBCGHG108.9°109.5°
HB2CBHB3120.8°109.4°
CD1CGCD2109.9°109.4°
CD1CGHG107.8°109.5°
CGCD1HD11109.5°109.5°
CGCD1HD12109.5°109.5°
CGCD1HD13109.4°109.4°
CD2CGHG110.2°109.5°
CGCD2HD21109.5°109.4°
CGCD2HD22109.5°109.5°
CGCD2HD23109.4°109.5°
HD11CD1HD12109.5°109.5°
HD11CD1HD13109.5°109.5°
HD12CD1HD13109.5°109.5°
HD21CD2HD22109.5°109.5°
HD21CD2HD23109.5°109.5°
HD22CD2HD23109.5°109.5°
OCN1122.8°120.0°
O3C2C4119.2°120.0°
C2C4O8124.6°126.0°
C2C4C5125.0°126.0°
O8C4C5110.4°108.0°
C4O8C7107.2°109.4°
C4C5C6107.1°106.7°
C4C5H5126.4°126.7°
O8C7C6107.7°108.8°
O8C7H7126.1°125.6°
C6C5H5126.4°126.6°
C5C6C7107.5°107.1°
C5C6H6126.3°126.5°
C7C6H6126.2°126.4°
C6C7H7126.1°125.6°
CA1N1C999.5°118.3°
N1CA1CB1111.4°109.0°
N1CA1C1111.4°109.6°
N1CA1HA1107.1°109.6°
CA1N1C119.5°120.8°
N1C9CD11101.6°107.3°
N1C9H91112.2°109.9°
N1C9H92113.8°109.8°
C9N1C140.3°120.9°
CB1CA1C1110.4°109.6°
CB1CA1HA1108.1°109.5°
CA1CB1CG1108.0°109.0°
CA1CB1HB1109.9°109.6°
CA1CB1HB21110.3°109.6°
C1CA1HA1108.2°109.6°
CA1C1O2118.3°120.0°
CA1C1O1118.2°119.9°
CG1CB1HB1110.0°109.5°
CG1CB1HB21110.3°109.5°
CB1CG1CD21128.5°128.3°
CB1CG1CD11124.5°124.7°
HB1CB1HB21108.3°109.6°
CD21CG1CD11107.0°107.0°
CG1CD21CE2106.7°106.1°
CG1CD21CE3134.3°132.7°
CG1CD11NE1110.9°109.9°
CG1CD11C9122.0°123.5°
CE2CD21CE3119.1°121.3°
CD21CE2NE1107.3°107.3°
CD21CE2CZ2122.5°120.6°
CD21CE3CZ3118.5°116.9°
CD21CE3HE3120.7°121.6°
NE1CE2CZ2130.2°132.1°
CE2NE1CD11108.1°109.8°
CE2NE1HNE126.0°125.1°
CE2CZ2CH2117.3°116.9°
CE2CZ2HZ2121.4°121.6°
CZ3CE3HE3120.7°121.5°
CE3CZ3CH2121.0°122.1°
CE3CZ3HZ3119.5°119.0°
NE1CD11C9125.5°126.6°
CD11NE1HNE125.9°125.1°
CD11C9H91112.2°110.0°
CD11C9H92113.9°109.9°
CH2CZ2HZ2121.3°121.5°
CZ2CH2CZ3121.6°122.2°
CZ2CH2HH2119.2°118.9°
CH2CZ3HZ3119.5°118.9°
CZ3CH2HH2119.2°118.9°
H91C9H92103.6°109.9°
O2C1O1123.5°120.0°
C1O2HO2109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CANC2H180.0°179.8°
NCACBC117.7°120.0°
NCACBHA120.5°120.0°
NCACHA120.5°119.9°
NCACBCG63.2°59.3°
NCACBHB256.9°179.3°
NCACBHB3176.2°60.7°
NCACO47.3°17.5°
CANC2O35.9°5.1°
CANC2C4178.2°175.0°
NCACN1130.5°162.6°
C2NCACB159.6°80.7°
C2NCAC82.0°159.3°
C2NCAHA39.7°39.3°
NC2O3C4172.3°179.9°
NC2C4O8163.5°0.1°
NC2C4C516.1°179.8°
HNCACB20.4°99.5°
HNCAC98.0°20.5°
HNCAHA140.3°140.5°
HNC2O3174.1°174.7°
HNC2C41.8°5.2°
CBCACHA119.9°120.1°
CACBCGHB2120.0°120.0°
CACBCGHB3113.1°120.0°
CACBHB2HB3114.4°120.0°
CACBCGCD153.9°79.6°
CACBCGCD2175.2°160.4°
CACBCGHG64.7°40.4°
CBCACO72.3°102.5°
CBCACN1109.9°77.5°
CCACBCG179.1°60.6°
CCACBHB260.9°59.4°
CCACBHB366.0°179.3°
CACON1177.6°180.0°
CACN1CA1177.4°174.1°
CACN1C99.3°5.6°
HACACBCG57.4°179.3°
HACACBHB2177.4°60.7°
HACACBHB355.7°59.3°
HACACO167.8°137.4°
HACACN110.0°42.6°
CGCBHB2HB3114.4°120.0°
CBCGCD1CD2120.6°120.0°
CBCGCD1HG119.3°120.1°
CBCGCD2HG119.3°120.1°
CBCGCD1HD11129.4°179.3°
CBCGCD1HD129.4°59.3°
CBCGCD1HD13110.6°60.7°
CBCGCD2HD21146.5°60.0°
CBCGCD2HD2293.5°180.0°
CBCGCD2HD2326.6°59.9°
HB2CBCGCD166.1°40.4°
HB2CBCGCD255.1°79.6°
HB2CBCGHG175.3°160.4°
HB3CBCGCD1167.0°160.4°
HB3CBCGCD271.8°40.4°
HB3CBCGHG48.4°79.6°
CD1CGCD2HG118.6°120.0°
CGCD1HD11HD12120.0°120.0°
CGCD1HD11HD13120.0°120.0°
CGCD1HD12HD13120.0°120.0°
CD1CGCD2HD2191.4°180.0°
CD1CGCD2HD2228.5°60.0°
CD1CGCD2HD23148.6°60.0°
CD2CGCD1HD11110.0°60.7°
CD2CGCD1HD12130.0°179.3°
CD2CGCD1HD1310.0°59.3°
CGCD2HD21HD22120.0°120.0°
CGCD2HD21HD23120.0°120.0°
CGCD2HD22HD23120.0°120.0°
HGCGCD1HD1110.1°59.3°
HGCGCD1HD12109.9°60.7°
HGCGCD1HD13130.1°179.3°
HGCGCD2HD2127.2°60.0°
HGCGCD2HD22147.2°59.9°
HGCGCD2HD2392.8°180.0°
HD11CD1HD12HD13120.0°120.1°
HD21CD2HD22HD23120.0°120.0°
OCN1CA15.0°5.9°
OCN1C9173.0°174.4°
O3C2C4O824.1°180.0°
O3C2C4C5156.3°0.4°
C2C4O8C5179.6°179.7°
C2C4O8C7179.7°180.0°
C2C4C5C6179.8°180.0°
C2C4C5H50.3°0.0°
O8C4C5C60.1°0.2°
O8C4C5H5179.9°179.8°
C4O8C7C60.1°0.2°
C4O8C7H7179.9°180.0°
C5C4O8C70.1°0.2°
C4C5C6H5180.0°180.0°
C4C5C6C70.1°0.1°
C4C5C6H6179.9°180.0°
O8C7C6C50.0°0.0°
O8C7C6H7180.0°179.8°
O8C7C6H6180.0°179.9°
C5C6C7H6180.0°179.9°
C5C6C7H7180.0°179.9°
H5C5C6C7179.9°179.9°
H5C5C6H60.0°0.0°
H6C6C7H70.0°0.0°
CA1N1C9C169.4°179.7°
N1CA1CB1C1124.4°119.9°
N1CA1CB1HA1117.4°119.8°
N1CA1C1HA1117.4°120.3°
N1CA1CB1CG148.7°45.2°
N1CA1CB1HB1168.7°74.6°
N1CA1CB1HB2171.9°165.1°
CA1N1C9CD1162.2°44.8°
CA1N1C9H91177.8°74.8°
CA1N1C9H9260.6°164.2°
N1CA1C1O2168.5°96.3°
N1CA1C1O111.9°83.8°
C9N1CA1CB183.1°64.6°
C9N1CA1C140.7°175.5°
C9N1CA1HA1158.8°55.2°
N1C9CD11CG122.7°11.7°
N1C9CD11NE1142.2°168.8°
N1C9CD11H91120.0°119.5°
N1C9CD11H92122.8°119.4°
N1C9H91H92123.2°120.9°
CB1CA1C1HA1118.2°120.2°
CA1CB1CG1HB1120.0°119.9°
CA1CB1CG1HB21120.6°119.9°
CA1CB1HB1HB21120.6°120.3°
CA1CB1CG1CD21178.3°162.2°
CA1CB1CG1CD110.5°17.8°
CB1CA1C1O244.1°144.2°
CB1CA1C1O1136.3°35.7°
CB1CA1N1C104.6°115.6°
C1CA1CB1CG175.7°165.1°
C1CA1CB1HB144.3°45.2°
C1CA1CB1HB21163.7°75.0°
CA1C1O2O1179.6°180.0°
CA1C1O2HO2179.6°180.0°
C1CA1N1C131.6°4.3°
HA1CA1CB1CG1166.1°74.6°
HA1CA1CB1HB173.9°165.5°
HA1CA1CB1HB2145.5°45.2°
HA1CA1C1O274.1°24.0°
HA1CA1C1O1105.5°156.0°
HA1CA1N1C13.5°124.5°
CG1CB1HB1HB21120.6°120.1°
CB1CG1CD21CD11179.0°180.0°
CB1CG1CD21CE2178.5°179.9°
CB1CG1CD21CE32.1°0.1°
CB1CG1CD11NE1178.1°179.8°
CB1CG1CD11C911.2°0.6°
HB1CB1CG1CD2161.7°77.9°
HB1CB1CG1CD11119.5°102.1°
HB21CB1CG1CD2157.7°42.3°
HB21CB1CG1CD11121.1°137.7°
CG1CD21CE2CE3179.5°180.0°
CG1CD21CE2NE10.2°0.0°
CG1CD21CE2CZ2179.4°180.0°
CG1CD21CE3CZ3179.3°180.0°
CG1CD21CE3HE30.7°0.1°
CD21CG1CD11NE11.0°0.1°
CD21CG1CD11C9167.8°179.5°
CD11CG1CD21CE20.5°0.1°
CD11CG1CD21CE3179.0°179.9°
CG1CD11NE1CE21.1°0.2°
CG1CD11NE1C9166.3°179.6°
CG1CD11NE1HNE178.9°179.9°
CG1CD11C9H91142.6°107.8°
CG1CD11C9H92100.1°131.1°
CD21CE2NE1CZ2179.6°180.0°
CE2CD21CE3CZ30.1°0.0°
CE2CD21CE3HE3179.9°180.0°
CD21CE2NE1CD110.8°0.1°
CD21CE2NE1HNE179.2°180.0°
CD21CE2CZ2CH20.0°0.0°
CD21CE2CZ2HZ2180.0°180.0°
CE3CD21CE2NE1179.7°180.0°
CE3CD21CE2CZ20.1°0.0°
CD21CE3CZ3HE3180.0°180.0°
CD21CE3CZ3CH20.0°0.0°
CD21CE3CZ3HZ3180.0°180.0°
CE2NE1CD11HNE180.0°179.9°
CE2NE1CD11C9167.4°179.4°
NE1CE2CZ2CH2179.6°180.0°
NE1CE2CZ2HZ20.4°0.1°
CZ2CE2NE1CD11178.8°179.9°
CZ2CE2NE1HNE1.2°0.0°
CE2CZ2CH2HZ2180.0°180.0°
CE2CZ2CH2CZ30.0°0.0°
CE2CZ2CH2HH2180.0°180.0°
CE3CZ3CH2CZ20.0°0.0°
CE3CZ3CH2HZ3180.0°179.9°
CE3CZ3CH2HH2179.9°180.0°
HE3CE3CZ3CH2180.0°179.9°
HE3CE3CZ3HZ30.0°0.0°
NE1CD11C9H9122.2°71.8°
NE1CD11C9H9295.0°49.4°
C9CD11NE1HNE12.6°0.5°
CD11C9H91H92123.2°121.1°
CD11C9N1C128.3°135.5°
CZ2CH2CZ3HH2180.0°180.0°
CZ2CH2CZ3HZ3180.0°180.0°
HZ2CZ2CH2CZ3179.9°180.0°
HZ2CZ2CH2HH20.1°0.0°
HZ3CZ3CH2HH20.0°0.0°
H91C9N1C8.3°104.9°
H92C9N1C108.9°16.0°
O1C1O2HO20.0°0.0°

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon