Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1AVY
DownloadVisualize
BU of 1avy by Molmil
FIBRITIN DELETION MUTANT M (BACTERIOPHAGE T4)
Descriptor: FIBRITIN
Authors:Strelkov, S.V, Tao, Y, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:1997-09-22
Release date:1997-12-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of bacteriophage T4 fibritin M: a troublesome packing arrangement.
Acta Crystallogr.,Sect.D, 54, 1998
1X8Y
DownloadVisualize
BU of 1x8y by Molmil
Human lamin coil 2B
Descriptor: Lamin A/C
Authors:Strelkov, S.V, Schumacher, J, Burkhard, P, Aebi, U, Herrmann, H.
Deposit date:2004-08-19
Release date:2004-11-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the human lamin A coil 2B dimer: implications for the head-to-tail association of nuclear lamins
J.Mol.Biol., 343, 2004
1GK4
DownloadVisualize
BU of 1gk4 by Molmil
HUMAN VIMENTIN COIL 2B FRAGMENT (CYS2)
Descriptor: ACETATE ION, VIMENTIN
Authors:Strelkov, S.V, Herrmann, H, Geisler, N, Zimbelmann, R, Aebi, U, Burkhard, P.
Deposit date:2001-08-08
Release date:2002-03-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly.
Embo J., 21, 2002
1GK6
DownloadVisualize
BU of 1gk6 by Molmil
Human vimentin coil 2B fragment linked to GCN4 leucine zipper (Z2B)
Descriptor: VIMENTIN
Authors:Strelkov, S.V, Herrmann, H, Geisler, N, Zimbelmann, R, Aebi, U, Burkhard, P.
Deposit date:2001-08-08
Release date:2002-03-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly.
Embo J., 21, 2002
1GK7
DownloadVisualize
BU of 1gk7 by Molmil
HUMAN VIMENTIN COIL 1A FRAGMENT (1A)
Descriptor: SULFATE ION, VIMENTIN
Authors:Strelkov, S.V, Herrmann, H, Geisler, N, Zimbelmann, R, Aebi, U, Burkhard, P.
Deposit date:2001-08-08
Release date:2002-03-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Conserved Segments 1A and 2B of the Intermediate Filament Dimer: Their Atomic Structures and Role in Filament Assembly.
Embo J., 21, 2002
1QEX
DownloadVisualize
BU of 1qex by Molmil
BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9), THE TRIGGER OF TAIL CONTRACTION AND THE LONG TAIL FIBERS CONNECTOR
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PROTEIN (BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9))
Authors:Kostyuchenko, V.A, Navruzbekov, G.A, Kurochkina, L.P, Strelkov, S.V, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:1999-03-30
Release date:1999-10-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of bacteriophage T4 gene product 9: the trigger for tail contraction.
Structure Fold.Des., 7, 1999
6I5Y
DownloadVisualize
BU of 6i5y by Molmil
Crystal structure of E. coli tyrRS in complex with 5'-O-(N-L-tyrosyl)sulfamoyl-adenosine
Descriptor: 1,2-ETHANEDIOL, 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, Tyrosine--tRNA ligase
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2018-11-15
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparative analysis of pyrimidine substituted aminoacyl-sulfamoyl nucleosides as potential inhibitors targeting class I aminoacyl-tRNA synthetases.
Eur.J.Med.Chem., 173, 2019
7YP8
DownloadVisualize
BU of 7yp8 by Molmil
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Leucyl-sulfamoyl 3-deazaadenosine
Descriptor: 1,2-ETHANEDIOL, Leucine--tRNA ligase, MAGNESIUM ION, ...
Authors:Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D.
Deposit date:2022-08-02
Release date:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The essential role of a structured water in base recognition of Class II aminoacyl-tRNA synthetases
To be published
1AA0
DownloadVisualize
BU of 1aa0 by Molmil
FIBRITIN DELETION MUTANT E (BACTERIOPHAGE T4)
Descriptor: CHLORIDE ION, FIBRITIN, ZINC ION
Authors:Tao, Y, Strelkov, S.V, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:1997-01-18
Release date:1997-07-23
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of bacteriophage T4 fibritin: a segmented coiled coil and the role of the C-terminal domain.
Structure, 5, 1997
5TC2
DownloadVisualize
BU of 5tc2 by Molmil
C-terminal domain of HIV-1 integrase, crystal structure
Descriptor: GLYCEROL, integrase
Authors:Tsirkone, V.G, Strelkov, S.V.
Deposit date:2016-09-14
Release date:2018-04-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Interaction of TRN-SR2 with HIV Integrase
To Be Published
3ZKR
DownloadVisualize
BU of 3zkr by Molmil
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) in complex with bromoform
Descriptor: CYS-LOOP LIGAND-GATED ION CHANNEL, TRIBROMOMETHANE
Authors:Spurny, R, Billen, B, Howard, R.J, Brams, M, Debaveye, S, Price, K.L, Weston, D.A, Strelkov, S.V, Tytgat, J, Bertrand, S, Bertrand, D, Lummis, S.C.R, Ulens, C.
Deposit date:2013-01-24
Release date:2013-02-06
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.649 Å)
Cite:Multisite Binding of a General Anesthetic to the Prokaryotic Pentameric Erwinia Chrysanthemi Ligand-Gated Ion Channel (Elic).
J.Biol.Chem., 288, 2013
2XZ5
DownloadVisualize
BU of 2xz5 by Molmil
MMTS-modified Y53C mutant of Aplysia AChBP in complex with acetylcholine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE, ...
Authors:Brams, M, Gay, E.A, Colon Saez, J, Guskov, A, van Elk, R, van der Schors, R.C, Peigneur, S, Tytgat, J, Strelkov, S.V, Smit, A.B, Yakel, J.L, Ulens, C.
Deposit date:2010-11-23
Release date:2010-12-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structures of a Cysteine-Modified Mutant in Loop D of Acetylcholine Binding Protein
J.Biol.Chem., 286, 2011
2XV5
DownloadVisualize
BU of 2xv5 by Molmil
Human lamin A coil 2B fragment
Descriptor: LAMIN-A/C
Authors:Kapinos, L.E, Burkhard, P, Aebi, U, Herrmann, H, Strelkov, S.V.
Deposit date:2010-10-22
Release date:2011-03-09
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Simultaneous Formation of Right- and Left-Handed Anti-Parallel Coiled-Coil Interfaces by a Coil2 Fragment of Human Lamin A.
J.Mol.Biol., 408, 2011
3KLT
DownloadVisualize
BU of 3klt by Molmil
Crystal structure of a vimentin fragment
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, CALCIUM ION, HEXAETHYLENE GLYCOL, ...
Authors:Nicolet, S, Strelkov, S.V.
Deposit date:2009-11-09
Release date:2010-05-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Atomic structure of vimentin coil 2.
J.Struct.Biol., 170, 2010
8HFM
DownloadVisualize
BU of 8hfm by Molmil
Crystal Structure of Mycobacterium smegmatis MshC
Descriptor: CALCIUM ION, L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase, ZINC ION
Authors:Pang, L, Weeks, S.D, Strelkov, S.V.
Deposit date:2022-11-11
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural Basis of Cysteine Ligase MshC Inhibition by Cysteinyl-Sulfonamides.
Int J Mol Sci, 23, 2022
8HFO
DownloadVisualize
BU of 8hfo by Molmil
Crystal Structure of Mycobacterium smegmatis MshC in Complex with Compound 7d
Descriptor: CALCIUM ION, L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase, N-[(3M)-3-(thiophen-2-yl)benzene-1-sulfonyl]-L-cysteinamide, ...
Authors:Pang, L, Weeks, S.D, Strelkov, S.V.
Deposit date:2022-11-11
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structural Basis of Cysteine Ligase MshC Inhibition by Cysteinyl-Sulfonamides.
Int J Mol Sci, 23, 2022
8HFN
DownloadVisualize
BU of 8hfn by Molmil
Crystal Structure of Mycobacterium smegmatis MshC in Complex with Compound 7b
Descriptor: CALCIUM ION, L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase, N-[(3M)-3-(6-methoxypyridin-3-yl)benzene-1-sulfonyl]-L-cysteinamide, ...
Authors:Pang, L, Weeks, S.D, Strelkov, S.V.
Deposit date:2022-11-11
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural Basis of Cysteine Ligase MshC Inhibition by Cysteinyl-Sulfonamides.
Int J Mol Sci, 23, 2022
7AP4
DownloadVisualize
BU of 7ap4 by Molmil
Thermus thermophilus Aspartyl-tRNA Synthetase in Complex with Compound AspS7HMDDA
Descriptor: (3~{S})-3-azanyl-4-[[(2~{R},3~{S},4~{R},5~{R})-5-[7-azanyl-5-(hydroxymethyl)benzimidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxysulfonylamino]-4-oxidanylidene-butanoic acid, Aspartate--tRNA(Asp) ligase
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-10-15
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Synthesis and Biological Evaluation of 1,3-Dideazapurine-Like 7-Amino-5-Hydroxymethyl-Benzimidazole Ribonucleoside Analogues as Aminoacyl-tRNA Synthetase Inhibitors.
Molecules, 25, 2020
3G7M
DownloadVisualize
BU of 3g7m by Molmil
Structure of the thaumatin-like xylanase inhibitor TLXI
Descriptor: GLYCEROL, SODIUM ION, Xylanase inhibitor TL-XI
Authors:Vandermarliere, E, Courtin, C.M, Lammens, W, Schoepe, J, Strelkov, S.V.
Deposit date:2009-02-10
Release date:2010-03-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of the noncompetitive xylanase inhibitor TLXI, member of the small thaumatin-like protein family.
Proteins, 78, 2010
7AP2
DownloadVisualize
BU of 7ap2 by Molmil
Neisseria gonorrhoeae Leucyl-tRNA Synthetase in Complex with Compound LeuS7HMDDA
Descriptor: 1,2-ETHANEDIOL, Leucine--tRNA ligase, MAGNESIUM ION, ...
Authors:Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-10-15
Release date:2020-10-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Synthesis and Biological Evaluation of 1,3-Dideazapurine-Like 7-Amino-5-Hydroxymethyl-Benzimidazole Ribonucleoside Analogues as Aminoacyl-tRNA Synthetase Inhibitors.
Molecules, 25, 2020
7AP3
DownloadVisualize
BU of 7ap3 by Molmil
Crystal structure of E. coli tyrosyl-tRNA synthetase in complex with TyrS7HMDDA
Descriptor: SODIUM ION, Tyrosine--tRNA ligase, [(2~{R},3~{S},4~{R},5~{R})-5-[7-azanyl-5-(hydroxymethyl)benzimidazol-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-3-(4-hydroxyphenyl)propanoyl]sulfamate
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-10-15
Release date:2020-10-28
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Synthesis and Biological Evaluation of 1,3-Dideazapurine-Like 7-Amino-5-Hydroxymethyl-Benzimidazole Ribonucleoside Analogues as Aminoacyl-tRNA Synthetase Inhibitors.
Molecules, 25, 2020
4YV3
DownloadVisualize
BU of 4yv3 by Molmil
Trimeric crystal structure of vimentin coil1B fragment
Descriptor: CHLORIDE ION, SULFATE ION, Vimentin
Authors:Chernyatina, A.A, Strelkov, S.V.
Deposit date:2015-03-19
Release date:2015-12-02
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:How to Study Intermediate Filaments in Atomic Detail.
Meth. Enzymol., 568, 2016
7AP1
DownloadVisualize
BU of 7ap1 by Molmil
Klebsiella pneumoniae Seryl-tRNA synthetase in Complex with Compound SerS7HMDDA
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Serine-tRNA ligase, ...
Authors:Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D.
Deposit date:2020-10-15
Release date:2020-11-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Synthesis and Biological Evaluation of 1,3-Dideazapurine-Like 7-Amino-5-Hydroxymethyl-Benzimidazole Ribonucleoside Analogues as Aminoacyl-tRNA Synthetase Inhibitors.
Molecules, 25, 2020
7AQF
DownloadVisualize
BU of 7aqf by Molmil
Crystal Structure of Small Molecule Inhibitor TM5484 Bound to Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-stab)
Descriptor: 5-Chloro-2-[[2-[3-(furan-3-yl)anilino]-2-oxoacetyl]amino]benzoic acid, Plasminogen activator inhibitor 1
Authors:Sillen, M, Strelkov, S.V, Declerck, P.J.
Deposit date:2020-10-21
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural Insight into the Two-Step Mechanism of PAI-1 Inhibition by Small Molecule TM5484.
Int J Mol Sci, 22, 2021
7AQG
DownloadVisualize
BU of 7aqg by Molmil
Crystal Structure of Small Molecule Inhibitor TM5484 Bound to Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-W175F)
Descriptor: 5-Chloro-2-[[2-[3-(furan-3-yl)anilino]-2-oxoacetyl]amino]benzoic acid, Plasminogen activator inhibitor 1, VHH-2g-42 (Nb42), ...
Authors:Sillen, M, Strelkov, S.V, Declerck, P.J.
Deposit date:2020-10-21
Release date:2021-02-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural Insight into the Two-Step Mechanism of PAI-1 Inhibition by Small Molecule TM5484.
Int J Mol Sci, 22, 2021

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon