Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6BPN
DownloadVisualize
BU of 6bpn by Molmil
The crystal structure of the Ferric-Catecholate import receptor Fiu from E. coli K12: Open form (C2221)
分子名称: (20S)-2,5,8,11,14,17-HEXAMETHYL-3,6,9,12,15,18-HEXAOXAHENICOSANE-1,20-DIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ...
著者Grinter, R.
登録日2017-11-23
公開日2018-11-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of the bacterial iron-catecholate transporter Fiu suggests that it imports substrates via a two-step mechanism.
J.Biol.Chem., 2019
6BPO
DownloadVisualize
BU of 6bpo by Molmil
The crystal structure of the Ferric-Catecholate import receptor Fiu from K12 E. coli: Closed form (P1)
分子名称: Catecholate siderophore receptor Fiu, octyl beta-D-glucopyranoside
著者Grinter, R.
登録日2017-11-23
公開日2018-11-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The structure of the bacterial iron-catecholate transporter Fiu suggests that it imports substrates via a two-step mechanism.
J.Biol.Chem., 2019
6FOK
DownloadVisualize
BU of 6fok by Molmil
Copper transporter OprC
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, COPPER (II) ION, Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2018-02-07
公開日2019-03-13
最終更新日2021-12-01
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6FOM
DownloadVisualize
BU of 6fom by Molmil
Copper transporter OprC
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Putative copper transport outer membrane porin OprC
著者Bhamidimarri, S.P, van den Berg, B.
登録日2018-02-07
公開日2019-03-13
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6E4V
DownloadVisualize
BU of 6e4v by Molmil
The Crystal Structure of FhuE from E. coli in complex with its substrate Coprogen
分子名称: COPROGEN, FhuE receptor, octyl beta-D-glucopyranoside
著者Grinter, R, Lithgow, T.
登録日2018-07-18
公開日2019-04-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Determination of the molecular basis for coprogen import by Gram-negative bacteria.
Iucrj, 6, 2019
6H7F
DownloadVisualize
BU of 6h7f by Molmil
Crystal structure of BauA, the Ferric preacinetobactin receptor from Acinetobacter baumannii in complex with Fe3+-Preacinetobactin-acinetobactin
分子名称: (4~{S},5~{R})-2-[2,3-bis(oxidanyl)phenyl]-~{N}-[2-(1~{H}-imidazol-4-yl)ethyl]-5-methyl-~{N}-oxidanyl-4,5-dihydro-1,3-oxazole-4-carboxamide, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, ...
著者Moynie, L, Naismith, J.H.
登録日2018-07-31
公開日2018-10-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Preacinetobactin not acinetobactin is essential for iron uptake by the BauA transporter of the pathogenAcinetobacter baumannii.
Elife, 7, 2018
6H7V
DownloadVisualize
BU of 6h7v by Molmil
Crystal structure of BauA, the Ferric preacinetobactin receptor from Acinetobacter baumannii
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, Ligand-gated channel protein
著者Moynie, L, Naismith, J.H.
登録日2018-07-31
公開日2018-10-10
最終更新日2019-01-16
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Preacinetobactin not acinetobactin is essential for iron uptake by the BauA transporter of the pathogenAcinetobacter baumannii.
Elife, 7, 2018
6HCP
DownloadVisualize
BU of 6hcp by Molmil
Crystal structure of BauA, the Ferric preacinetobactin receptor from Acinetobacter baumannii
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, BauA, ...
著者Moynie, L, Naismith, J.H.
登録日2018-08-16
公開日2018-10-10
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Preacinetobactin not acinetobactin is essential for iron uptake by the BauA transporter of the pathogenAcinetobacter baumannii.
Elife, 7, 2018
6I2J
DownloadVisualize
BU of 6i2j by Molmil
Crystal structure of the ferric enterobactin receptor mutant (Q482A) from Pseudomonas aeruginosa (PfeA) in complex with enterobactin
分子名称: FE (III) ION, Ferric enterobactin receptor, N,N',N''-[(3S,7S,11S)-2,6,10-trioxo-1,5,9-trioxacyclododecane-3,7,11-triyl]tris(2,3-dihydroxybenzamide)
著者Moynie, L, Naismith, J.H.
登録日2018-11-01
公開日2019-01-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.
Nat Commun, 10, 2019
6I96
DownloadVisualize
BU of 6i96 by Molmil
Structure of the ferrioxamine B transporter FoxA from Pseudomonas aeruginosa in complex with ferrioxamine B
分子名称: Ferric hydroxamate uptake, Ferrioxamine B, GLYCEROL, ...
著者Josts, I, Tidow, H.
登録日2018-11-22
公開日2019-08-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Ternary structure of the outer membrane transporter FoxA with resolved signalling domain provides insights into TonB-mediated siderophore uptake.
Elife, 8, 2019
6I97
DownloadVisualize
BU of 6i97 by Molmil
Structure of the ferrioxamine B transporter FoxA from Pseudomonas aeruginosa in complex with ferrioxamine B and a C-terminal TonB fragment
分子名称: Ferrioxamine B, Protein TonB, TonB-dependent receptor
著者Josts, I, Tidow, H.
登録日2018-11-22
公開日2019-08-28
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Ternary structure of the outer membrane transporter FoxA with resolved signalling domain provides insights into TonB-mediated siderophore uptake.
Elife, 8, 2019
6I98
DownloadVisualize
BU of 6i98 by Molmil
Structure of the ferrioxamine B transporter FoxA from Pseudomonas aeruginosa, apo state
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 3-HYDROXY-TETRADECANOIC ACID, Ferric hydroxamate uptake, ...
著者Josts, I, Tidow, H.
登録日2018-11-22
公開日2019-08-28
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Ternary structure of the outer membrane transporter FoxA with resolved signalling domain provides insights into TonB-mediated siderophore uptake.
Elife, 8, 2019
6Q5E
DownloadVisualize
BU of 6q5e by Molmil
Crystal structure of the ferric enterobactin receptor from Pseudomonas aeruginosa (PfeA) in complex with enterobactin
分子名称: (R)-((2R,3S,4R,5R,6R)-3-HYDROXY-2-(HYDROXYMETHYL)-5-((R)-3-HYDROXYTETRADECANAMIDO)-6-(PHOSPHONOOXY)TETRAHYDRO-2H-PYRAN-4-YL) 3-HYDROXYTETRADECANOATE, FE (III) ION, Ferric enterobactin receptor, ...
著者Moynie, L, Naismith, J.H.
登録日2018-12-07
公開日2019-01-16
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.
Nat Commun, 10, 2019
6R1F
DownloadVisualize
BU of 6r1f by Molmil
Crystal structure of the ferric enterobactin receptor mutant R480A from Pseudomonas aeruginosa (PfeA) in complex with enterobactin
分子名称: FE (III) ION, Ferric enterobactin receptor, N,N',N''-[(3S,7S,11S)-2,6,10-trioxo-1,5,9-trioxacyclododecane-3,7,11-triyl]tris(2,3-dihydroxybenzamide)
著者Moynie, L, Naismith, J.H.
登録日2019-03-14
公開日2019-04-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献The complex of ferric-enterobactin with its transporter from Pseudomonas aeruginosa suggests a two-site model.
Nat Commun, 10, 2019
6OFR
DownloadVisualize
BU of 6ofr by Molmil
The crystal structure of the outer membrane transporter YddB from Escherichia coli
分子名称: GLYCEROL, MAGNESIUM ION, TonB-dependent outer membrane receptor, ...
著者Grinter, R.
登録日2019-04-01
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Protease-associated import systems are widespread in Gram-negative bacteria.
Plos Genet., 15, 2019
6SLI
DownloadVisualize
BU of 6sli by Molmil
Structure of the RagAB peptide transporter
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, ALA-SER-THR-THR-GLY-GLY-ASN-SER-GLN-ARG-GLY-SER-GLY, ...
著者Madej, M, Ranson, N.A, White, J.B.R.
登録日2019-08-19
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.38 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6SLJ
DownloadVisualize
BU of 6slj by Molmil
Structure of the RagAB peptide transporter
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ALA-SER-THR-THR-GLY-ALA-ASN-SER-GLN-ARG, ...
著者Madej, M, Ranson, N.A, White, J.B.R.
登録日2019-08-20
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6SLN
DownloadVisualize
BU of 6sln by Molmil
Structure of the RagAB peptide transporter
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, DODECYL-BETA-D-MALTOSIDE, ...
著者Madej, M, Ranson, N.A, White, J.B.R.
登録日2019-08-20
公開日2020-05-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6SM3
DownloadVisualize
BU of 6sm3 by Molmil
Structure of the RagAB peptide importer in the 'closed-closed' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-GLY-ALA-THR-THR-ALA-THR-THR-THR-THR-SER-THR-SER, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-21
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6SML
DownloadVisualize
BU of 6sml by Molmil
Structure of the RagAB peptide importer in the 'open-open' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, GLY-THR-GLY-GLY-SER-THR-GLY-THR-THR-SER-ALA-GLY, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-22
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6SMQ
DownloadVisualize
BU of 6smq by Molmil
Structure of the RagAB peptide importer in the 'open-closed' state
分子名称: (1R,4S,6R)-6-({[2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-GLUCOPYRANOSYL]OXY}METHYL)-4-HYDROXY-1-{[(15-METHYLHEXADECANOYL)OXY]METHYL}-4-OXIDO-7-OXO-3,5-DIOXA-8-AZA-4-PHOSPHAHEPTACOS-1-YL 15-METHYLHEXADECANOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Lipoprotein RagB, ...
著者White, J.B.R, Ranson, N.A, van den Berg, B.
登録日2019-08-22
公開日2020-05-20
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural and functional insights into oligopeptide acquisition by the RagAB transporter from Porphyromonas gingivalis.
Nat Microbiol, 5, 2020
6V81
DownloadVisualize
BU of 6v81 by Molmil
The crystal structure of the outer-membrane transporter YncD
分子名称: CALCIUM ION, Probable TonB-dependent receptor YncD, octyl beta-D-glucopyranoside
著者Grinter, R.
登録日2019-12-10
公開日2020-05-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.957 Å)
主引用文献The crystal structure of the TonB-dependent transporter YncD reveals a positively charged substrate-binding site.
Acta Crystallogr D Struct Biol, 76, 2020
6Y47
DownloadVisualize
BU of 6y47 by Molmil
Crystal structure of the ferric enterobactin receptor (PfeA) in complex with BCV-L5
分子名称: 1,2-ETHANEDIOL, FE (III) ION, Ferric enterobactin receptor, ...
著者Naismith, J.H, Moynie, L.M.
登録日2020-02-19
公開日2021-01-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa.
Acs Infect Dis., 2022
6YY5
DownloadVisualize
BU of 6yy5 by Molmil
Crystal structure of the ferric enterobactin receptor (PfeA) in complex with TCV_L5
分子名称: FE (III) ION, Ferric enterobactin receptor, ~{N}-[2-[[(2~{S})-3-[[(2~{S})-3-[[1-[2-[2-[2-[4-[4-[5-(acetamidomethyl)-2-oxidanylidene-1,3-oxazolidin-3-yl]-2-fluoranyl-phenyl]piperazin-1-yl]-2-oxidanylidene-ethoxy]ethoxy]ethyl]-1,2,3-triazol-4-yl]methylamino]-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-oxidanylidene-propyl]amino]-2-[[2,3-bis(oxidanyl)phenyl]carbonylamino]-3-oxidanylidene-propyl]amino]-2-oxidanylidene-ethyl]-2,3-bis(oxidanyl)benzamide
著者Naismith, J.H, Moynie, L.M.
登録日2020-05-04
公開日2020-07-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.717 Å)
主引用文献Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa.
Acs Infect Dis., 2022
6Z2N
DownloadVisualize
BU of 6z2n by Molmil
Crystal structure of the ferric enterobactin receptor (PfeA) in complex with BCV-L6
分子名称: 1,2-ETHANEDIOL, BCV-L6, FE (III) ION, ...
著者Naismith, J.H, Moynie, L.M.
登録日2020-05-18
公開日2021-01-20
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.029 Å)
主引用文献Hijacking of the Enterobactin Pathway by a Synthetic Catechol Vector Designed for Oxazolidinone Antibiotic Delivery in Pseudomonas aeruginosa.
Acs Infect Dis., 2022

220113

件を2024-05-22に公開中

PDB statisticsPDBj update infoContact PDBjnumon