PDB: 64 件ウェブページステータス検索Chemie searchBIRD

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3R5F	Crystal structure of D-alanine-D-alnine ligase from Xanthomonas oryzae pv. oryzae with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-alanine--D-alanine ligase 1, MAGNESIUM ION 著者 Doan, T.T.N, Kim, J.K, Kang, L.W. 登録日 2011-03-18 公開日 2011-05-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Crystal structure of D-alanine-D-alanine ligase A from Xanthomonas oryzae pathovar oryzae with ATP To be Published
5D8D	Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii 分子名称: D-alanine--D-alanine ligase 著者 Huynh, K.H, Hong, M.K, Kang, L.W. 登録日 2015-08-17 公開日 2016-08-17 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding J. Microbiol., 53, 2015
5DMX	Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii, space group p212121 分子名称: D-alanine--D-alanine ligase 著者 Huynh, K.H, Hong, M.K, Kang, L.W. 登録日 2015-09-09 公開日 2016-08-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding J. Microbiol., 53, 2015
3TQT	Structure of the D-alanine-D-alanine ligase from Coxiella burnetii 分子名称: D-alanine--D-alanine ligase 著者 Rudolph, M, Cheung, J, Franklin, M.C, Cassidy, M, Gary, E, Burshteyn, F, Love, J. 登録日 2011-09-09 公開日 2011-09-28 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structural genomics for drug design against the pathogen Coxiella burnetii. Proteins, 83, 2015
3V4Z	D-alanine--D-alanine ligase from Yersinia pestis 分子名称: D-alanine--D-alanine ligase, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL 著者 Osipiuk, J, Nocek, B, Mulligan, R, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2011-12-15 公開日 2011-12-28 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 D-alanine--D-alanine ligase from Yersinia pestis. To be Published
6U1G	Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Cs+ 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CESIUM ION, D-ALANINE, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1H	Thermus thermophilus D-alanine-D-alanine ligase in complex with ADP, phosphate, Mg2+ and K+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1K	Thermus thermophilus D-alanine-D-alanine ligase in complex with ADP, carbonate, D-alanine-D-alanine, Mg2+ and K+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBONATE ION, D-ALANINE, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1C	Apo form of Thermus thermophilus D-alanine-D-alanine ligase 分子名称: D-alanine--D-alanine ligase 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1D	Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Rb+ 分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1J	Thermus thermophilus D-alanine-D-alanine ligase in complex with ADP, phosphate, D-ala-D-ala, Mg2+ and K+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ... 著者 Pederick, J.L, Bruning, J.B, Thompson, A.P. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1E	Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Rb+ 分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1F	Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Cs+ 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CESIUM ION, D-ALANINE, ... 著者 Pederick, J.L, Bruning, J.B. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020
6U1I	Thermus thermophilus D-alanine-D-alanine ligase in complex with ADP, phosphorylated D-cycloserine, Mg2+ and K+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase, MAGNESIUM ION, ... 著者 Pederick, J.L, Bruning, J.B, Thompson, A.P. 登録日 2019-08-15 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations. J.Biol.Chem., 295, 2020

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