Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3X00
DownloadVisualize
BU of 3x00 by Molmil
Crystal structure of the core streptavidin mutant V212 (Y22S/N23D/S27D/S45N/Y83S/R84K/E101D/R103K/E116N) complexed with bis iminobiotin long tail (Bis-IMNtail) at 1.3 A resolution
分子名称: 6-({5-[(2E,3aS,4S,6aR)-2-iminohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)hexanoic acid, ETHANE-1,2-DIAMINE, Streptavidin
著者Kawato, T, Mizohata, E, Shimizu, Y, Meshizuka, T, Yamamoto, T, Takasu, N, Matsuoka, M, Matsumura, H, Kodama, T, Kanai, M, Doi, H, Inoue, T, Sugiyama, A.
登録日2014-10-09
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure-based design and synthesis of a bivalent iminobiotin analog showing strong affinity toward a low immunogenic streptavidin mutant.
Biosci.Biotechnol.Biochem., 79, 2015
4GGZ
DownloadVisualize
BU of 4ggz by Molmil
The structure of bradavidin2-biotin complex
分子名称: BIOTIN, Bradavidin 2
著者Livnah, O, Meir, A.
登録日2012-08-07
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The highly dynamic oligomeric structure of bradavidin II is unique among avidin proteins.
Protein Sci., 22, 2013
4GJV
DownloadVisualize
BU of 4gjv by Molmil
Streptavidin-S112H
分子名称: CHLORIDE ION, Rhodium, Streptavidin, ...
著者Heinisch, T, Schirmer, T.
登録日2012-08-10
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A dual anchoring strategy for the localization and activation of artificial metalloenzymes based on the biotin-streptavidin technology.
J.Am.Chem.Soc., 135, 2013
4BBO
DownloadVisualize
BU of 4bbo by Molmil
Crystal structure of core-bradavidin
分子名称: ACETATE ION, BIOTIN, BLR5658 PROTEIN, ...
著者Airenne, T.T, Johnson, M.S, Maatta, J.A.E, Hytonen, V.H, Kulomaa, M.S.
登録日2012-09-27
公開日2013-10-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Core-Bradavidin
To be Published
4GGR
DownloadVisualize
BU of 4ggr by Molmil
The structure of apo bradavidin2 (Form A)
分子名称: Bradavidin 2
著者Livnah, O, Meir, A.
登録日2012-08-07
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The highly dynamic oligomeric structure of bradavidin II is unique among avidin proteins.
Protein Sci., 22, 2013
4GGT
DownloadVisualize
BU of 4ggt by Molmil
Structure of apo Bradavidin2 (Form B)
分子名称: Bradavidin 2
著者Livnah, O, Meir, A.
登録日2012-08-07
公開日2013-06-19
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.693 Å)
主引用文献The highly dynamic oligomeric structure of bradavidin II is unique among avidin proteins.
Protein Sci., 22, 2013
4GJS
DownloadVisualize
BU of 4gjs by Molmil
Streptavidin-K121H
分子名称: Rhodium, Streptavidin, trichloro{(1,2,3,4,5-eta)-1,2,3,4-tetramethyl-5-[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]cyclopentadienyl}rhodium(1+)
著者Heinisch, T, Schirmer, T.
登録日2012-08-10
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献A dual anchoring strategy for the localization and activation of artificial metalloenzymes based on the biotin-streptavidin technology.
J.Am.Chem.Soc., 135, 2013
4BCS
DownloadVisualize
BU of 4bcs by Molmil
Crystal structure of an avidin mutant
分子名称: ACETATE ION, BIOTIN, CHIMERIC AVIDIN, ...
著者Airenne, T.T, Niederhauser, B, Hytonen, V.P, Kulomaa, M.S, Johnson, M.S.
登録日2012-10-03
公開日2013-10-16
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献A Novel Chimeric Avidin with Increased Thermal Stability Using DNA Shuffling.
Plos One, 9, 2014
4BJ8
DownloadVisualize
BU of 4bj8 by Molmil
Zebavidin
分子名称: BIOTIN, GLYCEROL, ZEBAVIDIN
著者Airenne, T.T, Parthiban, M, Niederhauser, B, Zmurko, J, Kulomaa, M.S, Hytonen, V.P, Johnson, M.S.
登録日2013-04-17
公開日2013-11-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Zebavidin
Plos One, 8, 2013
7ZXZ
DownloadVisualize
BU of 7zxz by Molmil
dithiol-ligand bound to streptavidin
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[(1~{R},3~{S})-3-[3,5-bis(sulfanylmethyl)phenyl]-2,4-bis(oxidanylidene)cyclopentyl]pentanamide, DI(HYDROXYETHYL)ETHER, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-05-23
公開日2022-06-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献dithiol-ligand bound to streptavidin
To Be Published
7ZX9
DownloadVisualize
BU of 7zx9 by Molmil
Streptavidin with a fluorescent substrate
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(3,4-dihydro-1~{H}-isoquinolin-2-yl)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-05-20
公開日2022-06-15
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.546 Å)
主引用文献Streptavidin Iron-Porphyrin
To Be Published
7ZOF
DownloadVisualize
BU of 7zof by Molmil
Streptavidin Iron-Porphyrin
分子名称: (2R)-2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-3-[[(5Z,10Z,14Z,19Z)-15-[[[(2R)-2-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-3-sulfo-propanoyl]amino]methyl]-1,4,21,23-tetrahydroporphyrin-5-yl]methylamino]-3-oxidanylidene-propane-1-sulfonic acid, FE (III) ION, IMIDAZOLE, ...
著者Igareta, N.V, Ward, T.R.
登録日2022-04-25
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Streptavidin Iron-Porphyrin
To Be Published
7ZN1
DownloadVisualize
BU of 7zn1 by Molmil
Avidin + Biotin-Tempo
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, ...
著者Milani, J, Lau, K, Pojer, F, Ansermet, J.P, Saenz, F.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Avidin + Biotin-Tempo
To Be Published
7ZYL
DownloadVisualize
BU of 7zyl by Molmil
Avidin + Biotin-Tempo
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, Avidin
著者Milani, J, Myasnikov, A, Beckert, B, Nazarov, S, Ansermet, J.P, Saenz, F.
登録日2022-05-25
公開日2023-06-14
実験手法ELECTRON MICROSCOPY (2.08 Å)
主引用文献Avidin + Biotin-Tempo
To Be Published
8AQJ
DownloadVisualize
BU of 8aqj by Molmil
Hydrophobic probe bound to Streptavidin - 2
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(dimethylamino)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-08-12
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Hydrophobic probe bound to Streptavidin - 2
To Be Published
8AQD
DownloadVisualize
BU of 8aqd by Molmil
Hydrophobic probe bound to Streptavidin - 1
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[6-(dimethylamino)-1,3-bis(oxidanylidene)benzo[de]isoquinolin-2-yl]ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-08-12
公開日2022-08-31
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Hydrophobic probe bound to Streptavidin - 1
To Be Published
8AQY
DownloadVisualize
BU of 8aqy by Molmil
streptavidin mutant S112A with an iridium catalyst for CH activation
分子名称: Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-08-15
公開日2023-08-30
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献streptavidin mutant S112A with an iridium catalyst for CH activation
To Be Published
8AQO
DownloadVisualize
BU of 8aqo by Molmil
Streptavidin with a bisbiothinilated Fe4S4 cluster
分子名称: 5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-[2-[[20-[2-[5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]ethanoylamino]-2$l^{3},4,12,14$l^{3},16,24,25$l^{3},27$l^{3}-octathia-1$l^{4},3$l^{4},13$l^{4},15$l^{4}-tetraferranonacyclo[11.11.1.1^{1,13}.1^{6,10}.1^{18,22}.0^{2,15}.0^{3,14}.0^{3,25}.0^{15,27}]octacosa-6(28),7,9,18,20,22(26)-hexaen-8-yl]amino]-2-oxidanylidene-ethyl]pentanamide, Streptavidin
著者Igareta, N.V, Ward, T.R.
登録日2022-08-13
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Hydrophobic probe bound to Streptavidin - 1
To Be Published
8AQX
DownloadVisualize
BU of 8aqx by Molmil
streptavidin mutant S112I with an iridium catalyst for CH activation
分子名称: Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-08-14
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
8BY1
DownloadVisualize
BU of 8by1 by Molmil
streptavidin with an iridium catalyst for CH activation
分子名称: SULFATE ION, Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-12-11
公開日2023-12-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.486 Å)
主引用文献streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
8BY0
DownloadVisualize
BU of 8by0 by Molmil
streptavidin mutant S112I K121R with an iridium catalyst for CH activation
分子名称: SULFATE ION, Streptavidin, tert-butyl 7'-[5-[(3aS,4S,6aR)-2-oxidanylidene-1,3,3a,4,6,6a-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]-1-chloranyl-2,3,4,5,6-pentamethyl-spiro[1$l^{8}-iridapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexane-1,2'-3-aza-1-azonia-2$l^{8}-iridatricyclo[6.3.1.0^{4,12}]dodeca-1(11),4,6,8(12),9-pentaene]-3'-carboxylate
著者Igareta, N.V, Ward, T.R.
登録日2022-12-11
公開日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献streptavidin mutant S112I with an iridium catalyst for CH activation
To Be Published
8CRN
DownloadVisualize
BU of 8crn by Molmil
Streptavidin S112Y Co-TAML artificial metalloenzyme
分子名称: Co-linked Tetra-amido macrocyclic ligand, SODIUM ION, SULFATE ION, ...
著者Igareta, N.V.
登録日2023-03-08
公開日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Streptavidin S112Y Co-TAML artificial metalloenzyme
To Be Published
8CRP
DownloadVisualize
BU of 8crp by Molmil
Streptavidin WT Co-TAML artificial metalloenzyme
分子名称: Co-linked Tetra-amido macrocyclic ligand, SULFATE ION, Streptavidin
著者Igareta, N.V.
登録日2023-03-08
公開日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Streptavidin WT Co-TAML artificial metalloenzyme
To Be Published
8CK7
DownloadVisualize
BU of 8ck7 by Molmil
Avidin complexed to theophylline
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, GLYCEROL, ...
著者De March, M.
登録日2023-02-14
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The avidin-theophylline complex: A structural and computational study.
Proteins, 91, 2023
2IZE
DownloadVisualize
BU of 2ize by Molmil
APOSTREPTAVIDIN PH 3.08 I222 COMPLEX
分子名称: AMMONIUM ION, CHLORIDE ION, FORMIC ACID, ...
著者Katz, B.A.
登録日1997-08-13
公開日1998-09-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH.
J.Mol.Biol., 274, 1997

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon