PDB: 91 件ウェブページステータス検索Chemie searchBIRD

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8PYZ	Structure of Ompk36GD from Klebsiella pneumonia, solved at wavelength 4.13 A 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, OmpK36 著者 Duman, R, El Omari, K, Mykhaylyk, V, Orr, C, Kwong, H, Beis, K, Wagner, A. 登録日 2023-07-26 公開日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Experimental phasing opportunities for macromolecular crystallography at very long wavelengths. Commun Chem, 6, 2023
8I8R	Cryo-EM Structure of OmpC3-MlaA Complex in MSP2N2 Nanodiscs 分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Intermembrane phospholipid transport system lipoprotein MlaA, Outer membrane porin C 著者 Yeow, J, Luo, M, Chng, S.S. 登録日 2023-02-05 公開日 2023-12-20 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 Molecular mechanism of phospholipid transport at the bacterial outer membrane interface. Nat Commun, 14, 2023
8I8X	Cryo-EM Structure of OmpC3-MlaA-MlaC Complex in MSP2N2 Nanodiscs 分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, Intermembrane phospholipid transport system binding protein MlaC, Intermembrane phospholipid transport system lipoprotein MlaA, ... 著者 Yeow, J, Luo, M, Chng, S.S. 登録日 2023-02-05 公開日 2023-12-20 最終更新日 2023-12-27 実験手法 ELECTRON MICROSCOPY (3.25 Å) 主引用文献 Molecular mechanism of phospholipid transport at the bacterial outer membrane interface. Nat Commun, 14, 2023
8C7L	Serendipitous structure of OmpF contaminant in space group P21. 分子名称: Outer membrane porin F 著者 Bloch, Y, Theunissen, S, Savvides, S.N. 登録日 2023-01-16 公開日 2023-02-22 実験手法 X-RAY DIFFRACTION (3.52 Å) 主引用文献 Serendipitous structure of OmpF contaminant in space group P21. To Be Published
7SZI	Cryo-EM structure of OmpK36-TraN mating pair stabilization proteins from carbapenem-resistant Klebsiella pneumoniae 分子名称: OmpK36, TraN 著者 Beltran, L.C, Seddon, C, Beis, K, Frankel, G, Egelman, E.H. 登録日 2021-11-27 公開日 2022-06-08 最終更新日 2022-07-13 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Mating pair stabilization mediates bacterial conjugation species specificity. Nat Microbiol, 7, 2022
7Q3T	Crystal structure of the OmpK36 D insertion chimera from Klebsiella pneumonia 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LITHIUM ION, OmpK36 著者 Kwong, H, Beis, K. 登録日 2021-10-28 公開日 2022-07-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.788 Å) 主引用文献 Widespread emergence of OmpK36 loop 3 insertions among multidrug-resistant clones of Klebsiella pneumoniae. Plos Pathog., 18, 2022
7PZF	Crystal structure of the OmpK36 TD insertion chimera from Klebsiella pneumonia 分子名称: LITHIUM ION, OmpK36, TETRADECANE 著者 Kwong, H, Beis, K. 登録日 2021-10-12 公開日 2022-07-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.499 Å) 主引用文献 Widespread emergence of OmpK36 loop 3 insertions among multidrug-resistant clones of Klebsiella pneumoniae. Plos Pathog., 18, 2022
7FDY	Structure of OmpF1 分子名称: Porin OmpF, ZINC ION 著者 Jeong, W.J, Song, W.J. 登録日 2021-07-18 公開日 2022-11-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Design and directed evolution of noncanonical beta-stereoselective metalloglycosidases. Nat Commun, 13, 2022
7NST	ColicinE9 partial translocation complex 分子名称: Colicin-E9, Outer membrane protein F, Tol-Pal system protein TolB 著者 Webby, M.N, Kleanthous, C, Lukoyanova, N, Housden, N.G. 登録日 2021-03-08 公開日 2021-08-11 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Porin threading drives receptor disengagement and establishes active colicin transport through Escherichia coli OmpF. Embo J., 40, 2021
7NSU	ColicinE9 intact translocation complex 分子名称: Colicin-E9, Outer membrane protein F, Tol-Pal system protein TolB, ... 著者 Webby, M.N, Kleanthous, C, Lukoyanova, N, Housden, N.G. 登録日 2021-03-08 公開日 2021-08-11 最終更新日 2021-11-17 実験手法 ELECTRON MICROSCOPY (4.7 Å) 主引用文献 Porin threading drives receptor disengagement and establishes active colicin transport through Escherichia coli OmpF. Embo J., 40, 2021
7DE8	Crystal Structure of outer membrane protein PorB with G103K mutations from Neisseria meningitidis W135 分子名称: Outer membrane protein 著者 Tanabe, M, Kattner, C. 登録日 2020-11-02 公開日 2021-03-31 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.76 Å) 主引用文献 An antibiotic-resistance conferring mutation in a neisserial porin: Structure, ion flux, and ampicillin binding. Biochim Biophys Acta Biomembr, 1863, 2021
7JZ3	Osmoporin OmpC from E.coli K12 分子名称: Outer membrane protein C 著者 Lyu, M, Su, C, Morgan, C.E, Bolla, J.R, Robinson, C.V, Yu, E.W. 登録日 2020-09-01 公開日 2021-01-20 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.56 Å) 主引用文献 A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins. Nat.Methods, 18, 2021
6ZHP	Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic 分子名称: 2-[2-(2-octoxyethoxy)ethoxy]ethanol, MAGNESIUM ION, Outer membrane porin F, ... 著者 Sousa, C.F, Morais-Cabral, J, Gameiro, P. 登録日 2020-06-23 公開日 2021-05-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.053 Å) 主引用文献 Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic To Be Published
6ZHV	Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic 分子名称: 2-[2-(2-octoxyethoxy)ethoxy]ethanol, MAGNESIUM ION, Outer membrane porin F, ... 著者 Sousa, C.F, Morais-Cabral, J, Gameiro, P. 登録日 2020-06-23 公開日 2021-05-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.945 Å) 主引用文献 Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic To Be Published
6WTZ	Cryo-EM structure of E. Coli OmpF 分子名称: Outer membrane porin F 著者 Morgan, C.E, Su, C.-C, Lyu, M, Yu, E.W. 登録日 2020-05-04 公開日 2021-01-20 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.15 Å) 主引用文献 A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins. Nat.Methods, 18, 2021
6V78	OmpK37 porin 分子名称: OmpK37 著者 Rocker, A, Lithgow, T. 登録日 2019-12-08 公開日 2020-04-01 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Global Trends in Proteome Remodeling of the Outer Membrane Modulate Antimicrobial Permeability in Klebsiella pneumoniae. Mbio, 11, 2020
6RD3	Crystal structure of the wild type OmpK36 from Klebsiella pneumonia 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION, OmpK36 著者 Beis, K, Romano, M, Kwong, J. 登録日 2019-04-12 公開日 2019-09-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo. Nat Commun, 10, 2019
6RCK	Crystal structure of the OmpK36 GD insertion chimera from Klebsiella pneumonia 分子名称: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, LAURYL DIMETHYLAMINE-N-OXIDE, ... 著者 Beis, K, Romano, M, Kwong, J. 登録日 2019-04-11 公開日 2019-09-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.029 Å) 主引用文献 OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo. Nat Commun, 10, 2019
6RCP	Crystal structure of the OmpK36 clinical isolate ST258 from Klebsiella pneumonia 分子名称: OmpK36 著者 Beis, K, Romano, M, Kwong, J. 登録日 2019-04-11 公開日 2019-09-11 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.231 Å) 主引用文献 OmpK36-mediated Carbapenem resistance attenuates ST258 Klebsiella pneumoniae in vivo. Nat Commun, 10, 2019
6ENE	OmpF orthologue from Enterobacter cloacae (OmpE35) 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein (Porin), SULFATE ION, ... 著者 van den Berg, B, Abellon-Ruiz, J, Basle, A. 登録日 2017-10-04 公開日 2018-10-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins. Acs Infect Dis., 4, 2018
5O9C	Crystal structure of Omp36 from Enterobacter aerogenes 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Osmoporin Omp36 著者 Ferrara, L, Naismith, J. 登録日 2017-06-17 公開日 2018-06-27 最終更新日 2019-10-16 実験手法 X-RAY DIFFRACTION (2.469 Å) 主引用文献 Crystal structure of Omp36 from Enterobacter aerogenes To Be Published
5O78	Crystal structure of Omp35 from Enterobacter aerogenes 分子名称: Phosphoporin PhoE 著者 Ferrara, L, Naismith, J. 登録日 2017-06-08 公開日 2018-06-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 Crystal structure of Omp35 from Enterobacter aerogenes To Be Published
5O79	Klebsiella pneumoniae OmpK36 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, MAGNESIUM ION, OmpK36 著者 van den berg, B, Pathania, M. 登録日 2017-06-08 公開日 2018-06-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins. Acs Infect Dis., 4, 2018
5O77	Klebsiella pneumoniae OmpK35 分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, OmpK35 著者 van den berg, B, Pathania, M, Zahn, M. 登録日 2017-06-08 公開日 2018-06-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Getting Drugs into Gram-Negative Bacteria: Rational Rules for Permeation through General Porins. Acs Infect Dis., 4, 2018
5NXN	Structure of a L5-deletion mutant of Providencia stuartii Omp-Pst1 分子名称: CALCIUM ION, Porin 1 著者 El Khatib, M, Colletier, J.P. 登録日 2017-05-10 公開日 2018-02-21 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (3.12 Å) 主引用文献 Porin self-association enables cell-to-cell contact in Proc. Natl. Acad. Sci. U.S.A., 115, 2018

 

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