Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7GRF
DownloadVisualize
BU of 7grf by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-2
分子名称: 3C-like proteinase nsp5, 5-bromopyridin-3-amine, CHLORIDE ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GS4
DownloadVisualize
BU of 7gs4 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-27
分子名称: 3C-like proteinase nsp5, 7-(hydroxymethyl)-3-methyl-6~{H}-[1,3]thiazolo[3,2-a]pyrimidin-5-one, CHLORIDE ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GRU
DownloadVisualize
BU of 7gru by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-17
分子名称: 3-(4-chlorophenyl)-1-methyl-1H-pyrazol-5-amine, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GS3
DownloadVisualize
BU of 7gs3 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-26
分子名称: (6-phenylpyridin-3-yl)methanamine, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GRK
DownloadVisualize
BU of 7grk by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-7
分子名称: (6-fluoro-2H,4H-1,3-benzodioxin-8-yl)methanol, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GRS
DownloadVisualize
BU of 7grs by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-15
分子名称: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, SODIUM ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GS0
DownloadVisualize
BU of 7gs0 by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-23
分子名称: (pyridin-2-yl)(quinolin-2-yl)methanone, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GRP
DownloadVisualize
BU of 7grp by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-12
分子名称: 1-(2,3-dihydro-1-benzofuran-5-yl)methanamine, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
7GRW
DownloadVisualize
BU of 7grw by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with cpd-19
分子名称: (2S)-N-(3,5-dichlorophenyl)-2-hydroxypropanamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE, ...
著者Huang, C.-Y, Metz, A, Sharpe, M, Sweeney, A.
登録日2023-11-14
公開日2024-02-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Fragment-based screening targeting an open form of the SARS-CoV-2 main protease binding pocket.
Acta Crystallogr D Struct Biol, 80, 2024
8X3H
DownloadVisualize
BU of 8x3h by Molmil
Crystal structure of iron-bound recombinant ovotransferrin N-lobe at 0.93 angstrom resolution
分子名称: CARBONATE ION, FE (III) ION, GLYCEROL, ...
著者Toyoda, M, Mikami, B, Mizutani, K.
登録日2023-11-13
公開日2023-12-13
実験手法X-RAY DIFFRACTION (0.93 Å)
主引用文献Crystal structure of iron-bound ovotransferrin N-lobe at atomic resolution
To Be Published
8R43
DownloadVisualize
BU of 8r43 by Molmil
Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant H110N in complex with tri-mannuronic acid
分子名称: Alginate lyase, SODIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid
著者Wilkens, C.
登録日2023-11-12
公開日2024-01-17
実験手法X-RAY DIFFRACTION (0.87 Å)
主引用文献Crystal structure of Paradendryphiella salina PL7C alginate lyase mutant H110N in complex with tri-mannuronic acid
To Be Published
8UXX
DownloadVisualize
BU of 8uxx by Molmil
Arp2/3 branch junction complex, BeFx state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Chavali, S.S, Chou, S.Z, Sindelar, C.V.
登録日2023-11-11
公開日2024-01-31
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structures reveal how phosphate release from Arp3 weakens actin filament branches formed by Arp2/3 complex.
Nat Commun, 15, 2024
8R3V
DownloadVisualize
BU of 8r3v by Molmil
Escherichia coli paused disome complex (non-rotated disome interface)
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Fluegel, T, Schacherl, M.
登録日2023-11-10
公開日2024-03-06
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM.
Nat Commun, 15, 2024
8UXM
DownloadVisualize
BU of 8uxm by Molmil
Structure of PKA phosphorylated human RyR2-R420W in the open state in the presence of calcium and calmodulin
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Calmodulin-1, ...
著者Miotto, M.C, Marks, A.R.
登録日2023-11-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.56 Å)
主引用文献Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders
To Be Published
8UXL
DownloadVisualize
BU of 8uxl by Molmil
Structure of PKA phosphorylated human RyR2-R420W in the primed state in the presence of calcium and calmodulin
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Calmodulin-1, ...
著者Miotto, M.C, Marks, A.R.
登録日2023-11-09
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural basis for ryanodine receptor type 2 leak in heart failure and arrhythmogenic disorders
To Be Published
8R37
DownloadVisualize
BU of 8r37 by Molmil
Klebsiella pneumoniae fosfomycin-resistance protein (FosAKP)
分子名称: FOSFOMYCIN, FosA family fosfomycin resistance glutathione transferase, L(+)-TARTARIC ACID, ...
著者Papageorgiou, A.C, Varotsou, C, Labrou, N.E.
登録日2023-11-08
公開日2024-01-24
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural Studies of Klebsiella pneumoniae Fosfomycin-Resistance Protein and Its Application for the Development of an Optical Biosensor for Fosfomycin Determination.
Int J Mol Sci, 25, 2023
8R34
DownloadVisualize
BU of 8r34 by Molmil
CryoEM structure of the symmetric Pho90 dimer from yeast with substrates.
分子名称: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, Low-affinity phosphate transporter PHO90, PHOSPHATE ION, ...
著者Schneider, S, Kuehlbrandt, W, Yildiz, O.
登録日2023-11-08
公開日2024-04-24
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism.
Structure, 2024
8X1H
DownloadVisualize
BU of 8x1h by Molmil
Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2
分子名称: GLYCEROL, Nucleoprotein
著者Kumari, S, Gupta, G.D.
登録日2023-11-07
公開日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of N-terminal domain of Nucleocapsid protein of SARS-CoV-2
To Be Published
8R2I
DownloadVisualize
BU of 8r2i by Molmil
Cryo-EM Structure of native Photosystem II assembly intermediate from Chlamydomonas reinhardtii
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE, ...
著者Fadeeva, M, Klaiman, D, Kandiah, E, Nelson, N.
登録日2023-11-06
公開日2024-01-31
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structure of native photosystem II assembly intermediate from Chlamydomonas reinhardtii .
Front Plant Sci, 14, 2023
8R16
DownloadVisualize
BU of 8r16 by Molmil
Structure of compound 12 bound to SARS-CoV-2 main protease
分子名称: 1,2-ETHANEDIOL, 1-[6,7-bis(chloranyl)-3,4-dihydro-1H-isoquinolin-2-yl]-2-(5-methylpyridin-3-yl)ethanone, 3C-like proteinase, ...
著者Mac Sweeney, A, Hazemann, J.
登録日2023-11-01
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Identification of SARS-CoV-2 Mpro inhibitors through deep reinforcement learning for de novo drug design and computational chemistry approaches
To Be Published
8R12
DownloadVisualize
BU of 8r12 by Molmil
Structure of compound 8 bound to SARS-CoV-2 main protease
分子名称: 2-[[4-(5-chloranylpyridin-3-yl)carbonyl-1,4-diazepan-1-yl]methyl]benzenecarbonitrile, 3C-like proteinase, CHLORIDE ION, ...
著者Mac Sweeney, A, Hazemann, J.
登録日2023-11-01
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.587 Å)
主引用文献Identification of SARS-CoV-2 Mpro inhibitors through deep reinforcement learning for de novo drug design and computational chemistry approaches
To Be Published
8R11
DownloadVisualize
BU of 8r11 by Molmil
Structure of compound 7 bound to SARS-CoV-2 main protease
分子名称: 1,2-ETHANEDIOL, 1-[(2~{S})-2-(3-chlorophenyl)pyrrolidin-1-yl]-2-(5-methylpyridin-3-yl)ethanone, 3C-like proteinase, ...
著者Mac Sweeney, A, Hazemann, J.
登録日2023-11-01
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Identification of SARS-CoV-2 Mpro inhibitors through deep reinforcement learning for de novo drug design and computational chemistry approaches
To Be Published
8R14
DownloadVisualize
BU of 8r14 by Molmil
Structure of compound 11 bound to SARS-CoV-2 main protease
分子名称: (5-chloranylpyridin-3-yl)-[4-[(2-chlorophenyl)methyl]-1,4-diazepan-1-yl]methanone, 3C-like proteinase, BROMIDE ION, ...
著者Mac Sweeney, A, Hazemann, J.
登録日2023-11-01
公開日2024-02-07
実験手法X-RAY DIFFRACTION (1.336 Å)
主引用文献Identification of SARS-CoV-2 Mpro inhibitors through deep reinforcement learning for de novo drug design and computational chemistry approaches
To Be Published
8R1D
DownloadVisualize
BU of 8r1d by Molmil
SD1-3 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SD1-3 Fab Heavy Chain, SD1-3 Fab Light Chain, ...
著者Duyvesteyn, H.M.E, Ren, J, Stuart, D.I.
登録日2023-11-01
公開日2024-03-13
最終更新日2024-04-10
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献The SARS-CoV-2 neutralizing antibody response to SD1 and its evasion by BA.2.86.
Nat Commun, 15, 2024
8UU5
DownloadVisualize
BU of 8uu5 by Molmil
Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 5S Ribosomal RNA, ...
著者Seely, S.M, Basu, R.S, Gagnon, M.G.
登録日2023-10-31
公開日2024-02-28
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Mechanistic insights into the alternative ribosome recycling by HflXr.
Nucleic Acids Res., 52, 2024

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon