Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6N23
DownloadVisualize
BU of 6n23 by Molmil
BEST1 in a calcium-bound inactivated state
Descriptor: Bestrophin homolog, CALCIUM ION
Authors:Miller, A.N, Vaisey, G, Long, S.B.
Deposit date:2018-11-12
Release date:2019-01-23
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular mechanisms of gating in the calcium-activated chloride channel bestrophin.
Elife, 8, 2019
6N28
DownloadVisualize
BU of 6n28 by Molmil
BEST1 calcium-bound open state
Descriptor: Bestrophin homolog, CALCIUM ION
Authors:Miller, A.N, Vaisey, G, Long, S.B.
Deposit date:2018-11-12
Release date:2019-01-23
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular mechanisms of gating in the calcium-activated chloride channel bestrophin.
Elife, 8, 2019
6N26
DownloadVisualize
BU of 6n26 by Molmil
BEST1 calcium-free closed state
Descriptor: Bestrophin homolog
Authors:Miller, A.N, Vaisey, G, Long, S.B.
Deposit date:2018-11-12
Release date:2019-01-23
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular mechanisms of gating in the calcium-activated chloride channel bestrophin.
Elife, 8, 2019
5UIP
DownloadVisualize
BU of 5uip by Molmil
structure of DHFR with bound DAP, p-ABG and NADP
Descriptor: Dihydrofolate reductase, N-(4-aminobenzene-1-carbonyl)-L-glutamic acid, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Pedersen, L.C, London, R.E.
Deposit date:2017-01-14
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Structural Basis for Biguanide Activity.
Biochemistry, 56, 2017
6MM9
DownloadVisualize
BU of 6mm9 by Molmil
Diheteromeric NMDA receptor GluN1/GluN2A in the '1-Knuckle' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 6.1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, NMDA 1, ...
Authors:Jalali-Yazdi, F, Chowdhury, S, Yoshioka, C, Gouaux, E.
Deposit date:2018-09-29
Release date:2018-11-28
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5.97 Å)
Cite:Mechanisms for Zinc and Proton Inhibition of the GluN1/GluN2A NMDA Receptor.
Cell, 175, 2018
6MMU
DownloadVisualize
BU of 6mmu by Molmil
Triheteromeric NMDA receptor GluN1/GluN2A/GluN2A* in the '2-Knuckle-Asymmetric' conformation, in complex with glycine and glutamate, in the presence of 1 micromolar zinc chloride, and at pH 7.4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
Authors:Jalali-Yazdi, F, Chowdhury, S, Yoshioka, C, Gouaux, E.
Deposit date:2018-10-01
Release date:2018-11-28
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (5.3 Å)
Cite:Mechanisms for Zinc and Proton Inhibition of the GluN1/GluN2A NMDA Receptor.
Cell, 175, 2018
5FIV
DownloadVisualize
BU of 5fiv by Molmil
STRUCTURAL STUDIES OF HIV AND FIV PROTEASES COMPLEXED WITH AN EFFICIENT INHIBITOR OF FIV PR
Descriptor: RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Li, M, Lee, T, Morris, G, Laco, G, Wong, C, Olson, A, Elder, J, Wlodawer, A, Gustchina, A.
Deposit date:1998-12-02
Release date:1998-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural studies of FIV and HIV-1 proteases complexed with an efficient inhibitor of FIV protease
Proteins, 38, 2000
5V49
DownloadVisualize
BU of 5v49 by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor (Chem 1917)
Descriptor: GLYCEROL, METHIONINE, Methionyl-tRNA synthetase, ...
Authors:Barros-Alvarez, X, Hol, W.G.J.
Deposit date:2017-03-08
Release date:2017-07-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Optimization of a binding fragment targeting the "enlarged methionine pocket" leads to potent Trypanosoma brucei methionyl-tRNA synthetase inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
4GN5
DownloadVisualize
BU of 4gn5 by Molmil
OBody AM3L15 bound to hen egg-white lysozyme
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, GLYCEROL, ...
Authors:Steemson, J.D, Liddament, M.T.
Deposit date:2012-08-16
Release date:2013-08-21
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.
Plos One, 9, 2014
3DIZ
DownloadVisualize
BU of 3diz by Molmil
Crystallization of the Thermotoga maritima lysine riboswitch bound to lysine in the Absence of Mg2+
Descriptor: LYSINE, POTASSIUM ION, RNA (174-MER), ...
Authors:Serganov, A.A.
Deposit date:2008-06-21
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural insights into amino acid binding and gene control by a lysine riboswitch.
Nature, 455, 2008
5UIO
DownloadVisualize
BU of 5uio by Molmil
structure of DHFR with bound DAP, p-ABG and NADP
Descriptor: BETA-MERCAPTOETHANOL, Dihydrofolate reductase, FORMIC ACID, ...
Authors:Pedersen, L.C, London, R.E.
Deposit date:2017-01-14
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.929 Å)
Cite:A Structural Basis for Biguanide Activity.
Biochemistry, 56, 2017
4GN4
DownloadVisualize
BU of 4gn4 by Molmil
OBody AM2EP06 bound to hen egg-white lysozyme
Descriptor: GLYCEROL, Lysozyme C, OBody AM2EP06
Authors:Steemson, J.D, Liddament, M.T.
Deposit date:2012-08-16
Release date:2013-08-21
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (1.861 Å)
Cite:Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.
Plos One, 9, 2014
5BW6
DownloadVisualize
BU of 5bw6 by Molmil
Tryptophan Synthase from Salmonella typhimurium in complex with a single molecule of 2-({[4-(trifluoromethoxy)phenyl]carbonyl}amino)ethyl dihydrogen phosphate (F6) in the alpha-site.
Descriptor: 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Hilario, E, Caulkins, B.G, Young, R.P, Niks, D, Dunn, M.F, Mueller, L.J, Fan, L.
Deposit date:2015-06-06
Release date:2016-02-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Visualizing the tunnel in tryptophan synthase with crystallography: Insights into a selective filter for accommodating indole and rejecting water.
Biochim.Biophys.Acta, 1864, 2016
3AQE
DownloadVisualize
BU of 3aqe by Molmil
Crystal structure of the extracellular domain of human RAMP2
Descriptor: Receptor activity-modifying protein 2
Authors:Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Shindo, T, Yokoyama, S.
Deposit date:2010-10-29
Release date:2011-11-09
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for extracellular interactions between calcitonin receptor-like receptor and receptor activity-modifying protein 2 for adrenomedullin-specific binding
Protein Sci., 21, 2012
6JKQ
DownloadVisualize
BU of 6jkq by Molmil
Crystal structure of aspartate transcarbamoylase from Trypanosoma cruzi (Ligand-free form)
Descriptor: Aspartate carbamoyltransferase
Authors:Matoba, K, Shiba, T, Nara, T, Aoki, T, Nagasaki, S, Hayamizu, R, Honma, T, Tanaka, A, Inoue, M, Matsuoka, S, Balogun, E.O, Inaoka, D.K, Kita, K, Harada, S.
Deposit date:2019-03-01
Release date:2020-03-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystallographic snapshots of Trypanosoma cruzi aspartate transcarbamoylase revealed an ordered Bi-Bi reaction mechanism
To Be Published
3QPY
DownloadVisualize
BU of 3qpy by Molmil
Crystal structure of a mutant (K57A) of 3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8PS) from Neisseria meningitidis
Descriptor: 2-dehydro-3-deoxyphosphooctonate aldolase, CHLORIDE ION, GLYCEROL, ...
Authors:Allison, T.M, Jameson, G.B, Parker, E.J.
Deposit date:2011-02-14
Release date:2011-04-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Targeting the role of a key conserved motif for substrate selection and catalysis by 3-deoxy-D-manno-octulosonate 8-phosphate synthase
Biochemistry, 50, 2011
3AQF
DownloadVisualize
BU of 3aqf by Molmil
Crystal structure of the human CRLR/RAMP2 extracellular complex
Descriptor: Calcitonin gene-related peptide type 1 receptor, Receptor activity-modifying protein 2
Authors:Kusano, S, Kukimono-Niino, M, Shirouzu, M, Shindo, T, Yokoyama, S.
Deposit date:2010-10-29
Release date:2011-11-02
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for extracellular interactions between calcitonin receptor-like receptor and receptor activity-modifying protein 2 for adrenomedullin-specific binding
Protein Sci., 21, 2012
5LCT
DownloadVisualize
BU of 5lct by Molmil
Cocrystal structure of cAMP-dependent Protein Kinase (PKA) in complex with a R-methyl-piperazine substituted Fasudil-derivative (Ligand 02)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-[(2~{R})-2-methylpiperazin-1-yl]sulfonylisoquinoline, METHANOL, ...
Authors:Wienen-Schmidt, B, Heine, A, Klebe, G.
Deposit date:2016-06-22
Release date:2018-01-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.615 Å)
Cite:Cocrystal structure of cAMP-dependent Protein Kinase (PKA) in complex with different Fasudil-derivatives
To Be Published
5LCU
DownloadVisualize
BU of 5lcu by Molmil
Cocrystal structure of cAMP-dependent Protein Kinase (PKA) in complex with a S-methyl-piperazine substituted Fasudil-derivative (Ligand 01)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-(5-ISOQUINOLINESULFONYL)-2-METHYLPIPERAZINE, METHANOL, ...
Authors:Wienen-Schmidt, B, Heine, A, Klebe, G.
Deposit date:2016-06-22
Release date:2018-01-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.579 Å)
Cite:Cocrystal structure of cAMP-dependent Protein Kinase (PKA) in complex with different Fasudil-derivatives
To Be Published
7YXU
DownloadVisualize
BU of 7yxu by Molmil
Crystal structure of agonistic antibody 1618 fab domain bound to human 4-1BB.
Descriptor: MANGANESE (II) ION, Tumor necrosis factor receptor superfamily member 9, heavy chain of Fab, ...
Authors:Hakansson, M, Rose, N, Petersson, J, Enell Smith, K, Thorolfsson, M, von Schantz, L.
Deposit date:2022-02-16
Release date:2023-01-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The Bispecific Tumor Antigen-Conditional 4-1BB x 5T4 Agonist, ALG.APV-527, Mediates Strong T-Cell Activation and Potent Antitumor Activity in Preclinical Studies.
Mol.Cancer Ther., 22, 2023
1EL5
DownloadVisualize
BU of 1el5 by Molmil
COMPLEX OF MONOMERIC SARCOSINE OXIDASE WITH THE INHIBITOR DIMETHYLGLYCINE
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, N,N-DIMETHYLGLYCINE, ...
Authors:Wagner, M.A, Trickey, P, Chen, Z.-W, Mathews, F.S, Jorns, M.S.
Deposit date:2000-03-13
Release date:2000-12-06
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Monomeric sarcosine oxidase: 1. Flavin reactivity and active site binding determinants.
Biochemistry, 39, 2000
2NNQ
DownloadVisualize
BU of 2nnq by Molmil
Crystal structure of human adipocyte fatty acid binding protein in complex with ((2'-(5-ethyl-3,4-diphenyl-1H-pyrazol-1-yl)-3-biphenylyl)oxy)acetic acid
Descriptor: ((2'-(5-ETHYL-3,4-DIPHENYL-1H-PYRAZOL-1-YL)-3-BIPHENYLYL)OXY)ACETIC ACID, Fatty acid-binding protein, adipocyte, ...
Authors:Jacobson, B.L.
Deposit date:2006-10-24
Release date:2007-06-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Potent and selective biphenyl azole inhibitors of adipocyte fatty acid binding protein (aFABP).
Bioorg.Med.Chem.Lett., 17, 2007
1CD9
DownloadVisualize
BU of 1cd9 by Molmil
2:2 COMPLEX OF G-CSF WITH ITS RECEPTOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEIN (G-CSF RECEPTOR), PROTEIN (GRANULOCYTE COLONY-STIMULATING FACTOR)
Authors:Aritomi, M, Kunishima, N, Okamoto, T, Kuroki, R, Ota, Y, Morikawa, K.
Deposit date:1999-03-08
Release date:2000-03-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Atomic structure of the GCSF-receptor complex showing a new cytokine-receptor recognition scheme.
Nature, 401, 1999
6N25
DownloadVisualize
BU of 6n25 by Molmil
BEST1 open state W287F mutant, calcium-bound
Descriptor: Bestrophin homolog, CALCIUM ION
Authors:Miller, A.N, Vaisey, G, Long, S.B.
Deposit date:2018-11-12
Release date:2019-01-23
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular mechanisms of gating in the calcium-activated chloride channel bestrophin.
Elife, 8, 2019
1B4L
DownloadVisualize
BU of 1b4l by Molmil
15 ATMOSPHERE OXYGEN YEAST CU/ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE (298K) STRUCTURE
Descriptor: COPPER (II) ION, PROTEIN (CU/ZN SUPEROXIDE DISMUTASE), ZINC ION
Authors:Hart, P.J, Balbirnie, M.M, Ogihara, N.L, Nersissian, A.M, Weiss, M.S, Valentine, J.S, Eisenberg, D.
Deposit date:1998-12-22
Release date:1999-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A structure-based mechanism for copper-zinc superoxide dismutase.
Biochemistry, 38, 1999

224931

數據於2024-09-11公開中

PDB statisticsPDBj update infoContact PDBjnumon