Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5NNY
DownloadVisualize
BU of 5nny by Molmil
Crystal structure of the phosphatase domain from the Legionella effector WipB
Descriptor: WipB
Authors:Pinotsis, N, Waksman, G, Prevost, M.S.
Deposit date:2017-04-10
Release date:2017-09-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Legionella effector WipB is a translocated Ser/Thr phosphatase that targets the host lysosomal nutrient sensing machinery.
Sci Rep, 7, 2017
9UWZ
DownloadVisualize
BU of 9uwz by Molmil
Crystal structure of the type III secretion chaperone VecA from Vibrio parahaemolyticus
Descriptor: CesT family type III secretion system chaperone, HEXATANTALUM DODECABROMIDE, PHOSPHATE ION
Authors:Iimori, M, Oki, H, Akeda, Y, Ishii, E, Kodama, T, Ueda, T, Nakamura, S, Matsuda, S, Kawahara, K, Iida, T.
Deposit date:2025-05-13
Release date:2025-06-25
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of effector recognition by the T3SS chaperone VecA from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 776, 2025
9UX0
DownloadVisualize
BU of 9ux0 by Molmil
Crystal structure of the virulence effector VepA in complex with its secretion chaperone VecA
Descriptor: Cation transporter, CesT family type III secretion system chaperone
Authors:Iimori, M, Oki, H, Akeda, Y, Ishii, E, Kodama, T, Ueda, T, Nakamura, S, Matsuda, S, Kawahara, K, Iida, T.
Deposit date:2025-05-13
Release date:2025-06-25
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structural basis of effector recognition by the T3SS chaperone VecA from Vibrio parahaemolyticus.
Biochem.Biophys.Res.Commun., 776, 2025
6BS9
DownloadVisualize
BU of 6bs9 by Molmil
Stage III sporulation protein AB (SpoIIIAB)
Descriptor: SULFATE ION, Stage III sporulation protein AB
Authors:Strynadka, N.C.J, Zeytuni, N, Camp, A.H, Flanagan, K.A.
Deposit date:2017-12-01
Release date:2018-01-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural characterization of SpoIIIAB sporulation-essential protein in Bacillus subtilis.
J. Struct. Biol., 202, 2018
7QSS
DownloadVisualize
BU of 7qss by Molmil
Crystal structure of homing endonuclease-associated TliVMA intein (C1A)
Descriptor: FORMIC ACID, V-type ATP synthase alpha chain
Authors:Beyer, H.M, Iwai, H.
Deposit date:2022-01-14
Release date:2022-03-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural Basis for the Propagation of Homing Endonuclease-Associated Inteins.
Front Mol Biosci, 9, 2022
5DN6
DownloadVisualize
BU of 5dn6 by Molmil
ATP synthase from Paracoccus denitrificans
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F0 subcomplex C subunit, ...
Authors:Morales-Rios, E, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
Deposit date:2015-09-09
Release date:2015-10-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.98 Å)
Cite:Structure of ATP synthase from Paracoccus denitrificans determined by X-ray crystallography at 4.0 angstrom resolution.
Proc.Natl.Acad.Sci.USA, 112, 2015
6TMK
DownloadVisualize
BU of 6tmk by Molmil
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, composite model
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2019-12-04
Release date:2020-12-16
Last modified:2025-04-09
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun, 12, 2021
6TML
DownloadVisualize
BU of 6tml by Molmil
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase hexamer, composite model
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta, ATP synthase subunit delta, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2019-12-04
Release date:2020-12-16
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun, 12, 2021
6TMJ
DownloadVisualize
BU of 6tmj by Molmil
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator model
Descriptor: ATP synthase subunit delta, ATP synthase subunit epsilon, ATP synthase subunit gamma, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2019-12-04
Release date:2020-12-16
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun, 12, 2021
2BL2
DownloadVisualize
BU of 2bl2 by Molmil
The membrane rotor of the V-type ATPase from Enterococcus hirae
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, SODIUM ION, UNDECYL-MALTOSIDE, ...
Authors:Murata, T, Yamato, I, Kakinuma, Y, Leslie, A.G.W, Walker, J.E.
Deposit date:2005-02-25
Release date:2005-04-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the Rotor of the Vacuolar-Type Na- ATPase from Enterococcus Hirae
Science, 308, 2005
4DT0
DownloadVisualize
BU of 4dt0 by Molmil
The structure of the peripheral stalk subunit E from Pyrococcus horikoshii
Descriptor: V-type ATP synthase subunit E
Authors:Balakrishna, A.M, Gruber, G.
Deposit date:2012-02-20
Release date:2012-05-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.65 Å)
Cite:The structure of subunit E of the Pyrococcus horikoshii OT3 A-ATP synthase gives insight into the elasticity of the peripheral stalk.
J.Mol.Biol., 420, 2012
5BN5
DownloadVisualize
BU of 5bn5 by Molmil
Structural basis for a unique ATP synthase core complex from Nanoarcheaum equitans
Descriptor: NEQ263, SULFATE ION, V-type ATP synthase alpha chain
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.997 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BN4
DownloadVisualize
BU of 5bn4 by Molmil
Structure of a unique ATP synthase NeqA-NeqB in complex with ANP from Nanoarcheaum equitans
Descriptor: MAGNESIUM ION, NEQ263, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5BN3
DownloadVisualize
BU of 5bn3 by Molmil
Structure of a unique ATP synthase NeqA-NeqB in complex with ADP from Nanoarcheaum equitans
Descriptor: 1,4-DIETHYLENE DIOXIDE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-25
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
5LQX
DownloadVisualize
BU of 5lqx by Molmil
Structure of F-ATPase from Pichia angusta, state3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase AAP1 subunit, ...
Authors:Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
Deposit date:2016-08-17
Release date:2016-11-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5LQZ
DownloadVisualize
BU of 5lqz by Molmil
Structure of F-ATPase from Pichia angusta, state1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase OSCP subunit, ...
Authors:Vinothkumar, K.R, Montgomery, M.G, Liu, S, Walker, J.E.
Deposit date:2016-08-17
Release date:2016-11-16
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7 Å)
Cite:Structure of the mitochondrial ATP synthase fromPichia angustadetermined by electron cryo-microscopy.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
3QG1
DownloadVisualize
BU of 3qg1 by Molmil
Crystal structure of P-loop G239A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ACETIC ACID, V-type ATP synthase alpha chain
Authors:Ragunathan, P, Manimekalai, M.S.S, Kumar, A, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-24
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
6NJO
DownloadVisualize
BU of 6njo by Molmil
Structure of the assembled ATPase EscN from the enteropathogenic E. coli (EPEC) type III secretion system
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, MAGNESIUM ION, ...
Authors:Majewski, D.D, Worrall, L.J, Hong, C, Atkinson, C.E, Vuckovic, M, Watanabe, N, Yu, Z, Strynadka, N.C.J.
Deposit date:2019-01-03
Release date:2019-02-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structure of the homohexameric T3SS ATPase-central stalk complex reveals rotary ATPase-like asymmetry.
Nat Commun, 10, 2019
9DNZ
DownloadVisualize
BU of 9dnz by Molmil
Human ClC-3:TMEM9, TMEM9 Protomer A: Complete, TMEM9 Protomer B: No LD, No CD
Descriptor: (2R)-1-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5E,8E,11E,13E)-icosa-5,8,11,13-tetraenoate, CHLORIDE ION, CHOLESTEROL, ...
Authors:Son, Y, Schrecker, M, Hite, R.K.
Deposit date:2024-09-18
Release date:2025-04-02
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural basis of ClC-3 inhibition by TMEM9 and PI(3,5)P 2.
Biorxiv, 2025
9DNY
DownloadVisualize
BU of 9dny by Molmil
Human ClC-3:TMEM9, TMEM9 Protomer A: No CD TMEM9, Protomer B: No LD, No CD
Descriptor: (2R)-1-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5E,8E,11E,13E)-icosa-5,8,11,13-tetraenoate, CHLORIDE ION, CHOLESTEROL, ...
Authors:Son, Y, Schrecker, M, Hite, R.K.
Deposit date:2024-09-18
Release date:2025-04-02
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Structural basis of ClC-3 inhibition by TMEM9 and PI(3,5)P 2.
Biorxiv, 2025
9DNX
DownloadVisualize
BU of 9dnx by Molmil
Human ClC-3:TMEM9, TMEM9 Protomer A and B: Complete
Descriptor: (2R)-1-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6R)-2,4,6-trihydroxy-3,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl (5E,8E,11E,13E)-icosa-5,8,11,13-tetraenoate, CHLORIDE ION, CHOLESTEROL, ...
Authors:Son, Y, Schrecker, M, Hite, R.K.
Deposit date:2024-09-18
Release date:2025-04-02
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structural basis of ClC-3 inhibition by TMEM9 and PI(3,5)P 2.
Biorxiv, 2025
6NJP
DownloadVisualize
BU of 6njp by Molmil
Structure of the assembled ATPase EscN in complex with its central stalk EscO from the enteropathogenic E. coli (EPEC) type III secretion system
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, EscO, ...
Authors:Majewski, D.D, Worrall, L.J, Hong, C, Atkinson, C.E, Vuckovic, M, Watanabe, N, Yu, Z, Strynadka, N.C.J.
Deposit date:2019-01-03
Release date:2019-02-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Cryo-EM structure of the homohexameric T3SS ATPase-central stalk complex reveals rotary ATPase-like asymmetry.
Nat Commun, 10, 2019
3QIA
DownloadVisualize
BU of 3qia by Molmil
Crystal structure of P-loop G237A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-26
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
3QJY
DownloadVisualize
BU of 3qjy by Molmil
Crystal structure of P-loop G234A mutant of subunit A of the A1AO ATP synthase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETIC ACID, ...
Authors:Ragunathan, P, Manimekalai, M.S.S, Jeyakanthan, J, Gruber, G.
Deposit date:2011-01-31
Release date:2011-10-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Conserved glycine residues in the P-loop of ATP synthases form a doorframe for nucleotide entrance.
J.Mol.Biol., 413, 2011
8J57
DownloadVisualize
BU of 8j57 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase Fo in complex with bedaquiline(BDQ)
Descriptor: ATP synthase subunit a, ATP synthase subunit c, Bedaquiline
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-04-21
Release date:2024-05-01
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Inhibition of M. tuberculosis and human ATP synthase by BDQ and TBAJ-587.
Nature, 631, 2024

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon