Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7LVC
DownloadVisualize
BU of 7lvc by Molmil
E. coli DHFR by Native Mn,P,S-SAD at Room Temperature
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Greisman, J.B, Dalton, K.M, Hekstra, D.R.
Deposit date:2021-02-24
Release date:2021-03-17
Last modified:2022-08-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Native SAD phasing at room temperature.
Acta Crystallogr D Struct Biol, 78, 2022
5FTA
DownloadVisualize
BU of 5fta by Molmil
Crystal structure of the N-terminal BTB domain of human KCTD10
Descriptor: BTB/POZ DOMAIN-CONTAINING ADAPTER FOR CUL3-MEDIATED RHOA DEGRADATION PROTEIN 3, MERCURY (II) ION
Authors:Pinkas, D.M, Sanvitale, C.E, Solcan, N, Goubin, S, Tallant, C, Newman, J.A, Kopec, J, Fitzpatrick, F, Talon, R, Collins, P, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A.
Deposit date:2016-01-12
Release date:2016-02-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural complexity in the KCTD family of Cullin3-dependent E3 ubiquitin ligases.
Biochem. J., 474, 2017
8A9O
DownloadVisualize
BU of 8a9o by Molmil
Structure of the polyamine acetyltransferase DpA
Descriptor: ACETYL COENZYME *A, BROMIDE ION, COENZYME A, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.587 Å)
Cite:A polyamine acetyltransferase regulates the motility and biofilm formation of Acinetobacter baumannii.
Nat Commun, 14, 2023
8AIL
DownloadVisualize
BU of 8ail by Molmil
Bacillus phage VMY22 p56 in complex with Bacillus weidmannii Ung
Descriptor: Bacillus phage VMY22 p56, GLYCEROL, IODIDE ION, ...
Authors:Muselmani, W, Bagneris, C, Savva, R.
Deposit date:2022-07-26
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A Multimodal Approach towards Genomic Identification of Protein Inhibitors of Uracil-DNA Glycosylase.
Viruses, 15, 2023
6G93
DownloadVisualize
BU of 6g93 by Molmil
Fragment-based discovery of a highly potent, orally bioavailable inhibitor which modulates the phosphorylation and catalytic activity of ERK1/2
Descriptor: 6-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-2,3-dihydroisoindol-1-one, Mitogen-activated protein kinase 1, SULFATE ION
Authors:O'Reilly, M.
Deposit date:2018-04-10
Release date:2018-05-30
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Fragment-Based Discovery of a Potent, Orally Bioavailable Inhibitor That Modulates the Phosphorylation and Catalytic Activity of ERK1/2.
J. Med. Chem., 61, 2018
5UXN
DownloadVisualize
BU of 5uxn by Molmil
Type II DAH7PS from Pseudomonas aeruginosa with Tyr bound
Descriptor: CHLORIDE ION, COBALT (II) ION, PHOSPHATE ION, ...
Authors:Sterritt, O.W, Jameson, G.B, Parker, E.J.
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Pseudoisostructural Type II DAH7PS Enzyme from Pseudomonas aeruginosa: Alternative Evolutionary Strategies to Control Shikimate Pathway Flux.
Biochemistry, 57, 2018
6YLJ
DownloadVisualize
BU of 6ylj by Molmil
Structure of D169A/E171A double mutant of chitinase Chit42 from Trichoderma harzianum complexed with chitinhexaose.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Endochitinase 42, ...
Authors:Jimenez-Ortega, E, Sanz-Aparicio, J.
Deposit date:2020-04-07
Release date:2021-10-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural inspection and protein motions modelling of a fungal glycoside hydrolase family 18 chitinase by crystallography depicts a dynamic enzymatic mechanism
Comput Struct Biotechnol J, 19, 2021
6FOM
DownloadVisualize
BU of 6fom by Molmil
Copper transporter OprC
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Putative copper transport outer membrane porin OprC
Authors:Bhamidimarri, S.P, van den Berg, B.
Deposit date:2018-02-07
Release date:2019-03-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Acquisition of ionic copper by the bacterial outer membrane protein OprC through a novel binding site.
Plos Biol., 19, 2021
6YR6
DownloadVisualize
BU of 6yr6 by Molmil
14-3-3 sigma in complex with hDM2-186 peptide
Descriptor: 14-3-3 protein sigma, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, IODIDE ION, ...
Authors:Wolter, M, Srdanovic, S, Warriner, S, Wilson, A, Ottmann, C.
Deposit date:2020-04-19
Release date:2021-11-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Understanding the interaction of 14-3-3 proteins with hDMX and hDM2: a structural and biophysical study.
Febs J., 2022
6HQB
DownloadVisualize
BU of 6hqb by Molmil
Monomeric cyanobacterial photosystem I
Descriptor: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (3'R)-3'-hydroxy-beta,beta-caroten-4-one, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, ...
Authors:Netzer-El, S.Y, Nelson, N, Caspy, I.
Deposit date:2018-09-24
Release date:2019-01-16
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal Structure of Photosystem I Monomer From Synechocystis PCC 6803.
Front Plant Sci, 9, 2018
6YR7
DownloadVisualize
BU of 6yr7 by Molmil
14-3-3 sigma in complex with hDMX-342+367 peptide
Descriptor: 14-3-3 protein sigma, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Protein Mdm4
Authors:Wolter, M, Srdanovic, S, Warriner, S, Wilson, A, Ottmann, C.
Deposit date:2020-04-19
Release date:2021-11-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:Understanding the interaction of 14-3-3 proteins with hDMX and hDM2: a structural and biophysical study.
Febs J., 2022
6HLL
DownloadVisualize
BU of 6hll by Molmil
Crystal structure of the Neurokinin 1 receptor in complex with the small molecule antagonist CP-99,994
Descriptor: (2~{S},3~{S})-~{N}-[(2-methoxyphenyl)methyl]-2-phenyl-piperidin-3-amine, Substance-P receptor,GlgA glycogen synthase,Substance-P receptor
Authors:Schoppe, J, Ehrenmann, J, Klenk, C, Rucktooa, P, Schutz, M, Dore, A.S, Pluckthun, A.
Deposit date:2018-09-11
Release date:2019-01-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Crystal structures of the human neurokinin 1 receptor in complex with clinically used antagonists.
Nat Commun, 10, 2019
8A9N
DownloadVisualize
BU of 8a9n by Molmil
Structure of DpA polyamine acetyltransferase in complex with 1,3-DAP
Descriptor: 1,3-DIAMINOPROPANE, Acetyltransferase, COENZYME A, ...
Authors:Garcia-Pino, A, Jurenas, D.
Deposit date:2022-06-28
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:A polyamine acetyltransferase regulates the motility and biofilm formation of Acinetobacter baumannii.
Nat Commun, 14, 2023
5UNI
DownloadVisualize
BU of 5uni by Molmil
Critical role of water molecules for proton translocation of the membrane-bound transhydrogenase
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, BENZAMIDINE, DI(HYDROXYETHYL)ETHER, ...
Authors:Padayatti, P.S, Leung, J.H.
Deposit date:2017-01-30
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Critical Role of Water Molecules in Proton Translocation by the Membrane-Bound Transhydrogenase.
Structure, 25, 2017
6PZM
DownloadVisualize
BU of 6pzm by Molmil
Putative SDR from Acinetobacter baumannii Crystal Form 1
Descriptor: 3-ketoacyl-ACP reductase
Authors:Cross, E.M, Aragao, D, Forwood, J.K.
Deposit date:2019-08-01
Release date:2019-08-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural characterization of a short-chain dehydrogenase/reductase from multi-drug resistant Acinetobacter baumannii.
Biochem.Biophys.Res.Commun., 518, 2019
6YR5
DownloadVisualize
BU of 6yr5 by Molmil
14-3-3 sigma in complex with hDMX-367 peptide
Descriptor: 14-3-3 protein sigma, Protein Mdm4, SULFATE ION
Authors:Wolter, M, Srdanovic, S, Ottman, C, Warriner, S, Wilson, A.
Deposit date:2020-04-19
Release date:2021-11-03
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Understanding the interaction of 14-3-3 proteins with hDMX and hDM2: a structural and biophysical study.
Febs J., 2022
8B1O
DownloadVisualize
BU of 8b1o by Molmil
Crystal structure of SUDV VP40 C314S mutant
Descriptor: Matrix protein VP40
Authors:Werner, A.-D, Becker, S.
Deposit date:2022-09-11
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The C-terminus of Sudan ebolavirus VP40 contains a functionally important CX n C motif, a target for redox modifications.
Structure, 31, 2023
6FPI
DownloadVisualize
BU of 6fpi by Molmil
Structure of fully reduced Hydrogenase (Hyd-1) variant E28Q
Descriptor: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, FE3-S4 CLUSTER, ...
Authors:Carr, S.B, Armstrong, F.A, Evans, R.M.
Deposit date:2018-02-09
Release date:2018-12-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic Exploitation of a Self-Repairing, Blocked Proton Transfer Pathway in an O2-Tolerant [NiFe]-Hydrogenase.
J. Am. Chem. Soc., 140, 2018
7LYH
DownloadVisualize
BU of 7lyh by Molmil
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor UAWJ9-36-1
Descriptor: 3C-like proteinase, GLYCEROL, benzyl (1S,3aR,6aS)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)hexahydrocyclopenta[c]pyrrole-2(1H)-carboxylate
Authors:Sacco, M, Wang, J, Chen, Y.
Deposit date:2021-03-07
Release date:2021-03-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rational Design of Hybrid SARS-CoV-2 Main Protease Inhibitors Guided by the Superimposed Cocrystal Structures with the Peptidomimetic Inhibitors GC-376, Telaprevir, and Boceprevir.
Acs Pharmacol Transl Sci, 4, 2021
5UNM
DownloadVisualize
BU of 5unm by Molmil
LarE, a sulfur transferase involved in synthesis of the cofactor for lactate racemase, substrate free form with flexible loop
Descriptor: ATP-utilizing enzyme of the PP-loopsuperfamily, PHOSPHATE ION
Authors:Fellner, M, Desguin, B, Hausinger, R.P, Hu, J.
Deposit date:2017-01-31
Release date:2017-08-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6YN1
DownloadVisualize
BU of 6yn1 by Molmil
Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer
Descriptor: Aprataxin and PNK-like factor, CHLORIDE ION, GLYCEROL, ...
Authors:Corbeski, I, Guo, X, Van Ingen, H, Sixma, T.K.
Deposit date:2020-04-10
Release date:2021-11-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF.
Sci Adv, 8, 2022
6HM3
DownloadVisualize
BU of 6hm3 by Molmil
Crystal structure of Rad4 BRCT1,2 in complex with a Sld3 phosphopeptide
Descriptor: CALCIUM ION, DNA replication regulator sld3, GLYCEROL, ...
Authors:Day, M, Rappas, M, Oliver, A.W, Pearl, L.H.
Deposit date:2018-09-12
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.77263618 Å)
Cite:BRCT domains of the DNA damage checkpoint proteins TOPBP1/Rad4 display distinct specificities for phosphopeptide ligands.
Elife, 7, 2018
6G9J
DownloadVisualize
BU of 6g9j by Molmil
Fragment-based discovery of a highly potent, orally bioavailable inhibitor which modulates the phosphorylation and catalytic activity of ERK1/2
Descriptor: 2-[5-[5-chloranyl-2-(oxan-4-ylamino)pyrimidin-4-yl]-3-oxidanylidene-1~{H}-isoindol-2-yl]-~{N}-[(1~{R})-1-phenylethyl]ethanamide, Mitogen-activated protein kinase 1, SULFATE ION
Authors:O'Reilly, M.
Deposit date:2018-04-10
Release date:2018-05-30
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Fragment-Based Discovery of a Potent, Orally Bioavailable Inhibitor That Modulates the Phosphorylation and Catalytic Activity of ERK1/2.
J. Med. Chem., 61, 2018
5UOA
DownloadVisualize
BU of 5uoa by Molmil
Structure of human endothelial nitric oxide synthase heme domain in complex with 3-[(2-Amino-4-methylquinolin-7-yl)methoxy]-5-((methylamino)methyl)benzonitrile
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-[(2-amino-4-methylquinolin-7-yl)methoxy]-5-[(methylamino)methyl]benzonitrile, CHLORIDE ION, ...
Authors:Chreifi, G, Li, H, Poulos, T.L.
Deposit date:2017-01-31
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Nitrile in the Hole: Discovery of a Small Auxiliary Pocket in Neuronal Nitric Oxide Synthase Leading to the Development of Potent and Selective 2-Aminoquinoline Inhibitors.
J. Med. Chem., 60, 2017
8AA7
DownloadVisualize
BU of 8aa7 by Molmil
Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme coordinated fragment
Descriptor: 2,3,4,9-tetrahydro-1~{H}-pyrido[3,4-b]indole, Cytochrome P450 protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Snee, M, Katariya, M, Levy, C, Leys, D.
Deposit date:2022-06-30
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme coordinated fragment
To Be Published

224201

數據於2024-08-28公開中

PDB statisticsPDBj update infoContact PDBjnumon