PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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4N0A	Crystal structure of Lsm2-3-Pat1C complex from Saccharomyces cerevisiae Descriptor: DNA topoisomerase 2-associated protein PAT1, U6 snRNA-associated Sm-like protein LSm2, U6 snRNA-associated Sm-like protein LSm3 Authors: Wu, D.H. Deposit date: 2013-10-01 Release date: 2013-12-04 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Lsm2 and Lsm3 bridge the interaction of the Lsm1-7 complex with Pat1 for decapping activation Cell Res., 24, 2014
3VLE	Crystal structure of yeast proteasome interacting protein Descriptor: DNA mismatch repair protein HSM3 Authors: Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T. Deposit date: 2011-12-01 Release date: 2012-02-22 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.41 Å) Cite: Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012
3VLD	Crystal structure of yeast proteasome interacting protein Descriptor: DNA mismatch repair protein HSM3 Authors: Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T. Deposit date: 2011-12-01 Release date: 2012-02-22 Last modified: 2012-04-18 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012
3WUS	Crystal Structure of the Vif-Binding Domain of Human APOBEC3F Descriptor: DNA dC->dU-editing enzyme APOBEC-3F, ZINC ION Authors: Nakashima, M, Kawamura, T, Ode, H, Watanabe, N, Iwatani, Y. Deposit date: 2014-05-02 Release date: 2015-06-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.54 Å) Cite: Structural Insights into HIV-1 Vif-APOBEC3F Interaction. J.Virol., 90, 2015
4A3T	yeast regulatory particle proteasome assembly chaperone Hsm3 Descriptor: DNA MISMATCH REPAIR PROTEIN HSM3 Authors: Richet, N, Barrault, M.B, Godart, C, Murciano, B, Le Tallec, B, Rousseau, E, Ledu, M.H, Charbonnier, J.B, Legrand, P, Guerois, R, Peyroche, A, Ochsenbein, F. Deposit date: 2011-10-04 Release date: 2012-04-11 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Dual Functions of the Hsm3 Protein in Chaperoning and Scaffolding Regulatory Particle Subunits During the Proteasome Assembly. Proc.Natl.Acad.Sci.USA, 109, 2012
1UHY	Crystal structure of d(GCGATAGC): the base-intercalated duplex Descriptor: 5'-D(*GP*(CBR)P*GP*AP*TP*AP*GP*C)-3', CHLORIDE ION, COBALT HEXAMMINE(III), ... Authors: Kondo, J, Umeda, S.I, Fujita, K, Sunami, T, Takenaka, A. Deposit date: 2003-07-13 Release date: 2004-02-03 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.7 Å) Cite: X-ray analyses of d(GCGAXAGC) containing G and T at X: the base-intercalated duplex is still stable even in point mutants at the fifth residue. J.Synchrotron Radiat., 11, 2004
1UHX	Crystal structure of d(GCGAGAGC): the base-intercalated duplex Descriptor: 5'-D(*GP*(CBR)P*GP*AP*GP*AP*GP*C)-3', CHLORIDE ION, COBALT HEXAMMINE(III), ... Authors: Kondo, J, Umeda, S.I, Fujita, K, Sunami, T, Takenaka, A. Deposit date: 2003-07-13 Release date: 2004-02-03 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2 Å) Cite: X-ray analyses of d(GCGAXAGC) containing G and T at X: the base-intercalated duplex is still stable even in point mutants at the fifth residue. J.Synchrotron Radiat., 11, 2004
2I1A	A Retroviral Protease-Like Domain in the Eukaryotic Protein Ddi1 Descriptor: DNA damage-inducible protein DDI1 Authors: Fass, D, Sirkis, R. Deposit date: 2006-08-14 Release date: 2006-10-24 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Ddi1, a eukaryotic protein with the retroviral protease fold. J.Mol.Biol., 364, 2006
2A9R	RR02-Rec Phosphate in the active site Descriptor: DNA-binding response regulator, MAGNESIUM ION, XENON Authors: Riboldi-Tunnicliffe, A. Deposit date: 2005-07-12 Release date: 2006-09-26 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.342 Å) Cite: Crystal structures of an activated YycF homologue, the essential response regulator from S. pneumoniae in complex with BeF3 and the effect of pH on BeF3 binding, possible phosphate in the active site To be Published
2B21	RADA Recombinase in complex with AMPPNP at pH 6.0 Descriptor: DNA repair and recombination protein radA, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Qian, X, He, Y, Wu, Y, Luo, Y. Deposit date: 2005-09-16 Release date: 2006-08-29 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal Structure of Methanococcus Voltae Rada at an Acidic pH To be Published
7Z5Z	CRYSTAL STRUCTURE OF WEISSELLA VIRIDESCENS FEMXVV NON-RIBOSOMAL AMINO ACID TRANSFERASE IN COMPLEX WITH A PEPTIDYL-XNA CONJUGATE Descriptor: DNA (5'-D(P*AP*CP*C)-R(P*(A9Z))-3'), GLYCEROL, N-acetyl-alpha-muramic acid, ... Authors: Li de la Sierra-Gallay, I. Deposit date: 2022-03-10 Release date: 2022-10-26 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.49 Å) Cite: Amino-acyl tXNA as inhibitors or amino acid donors in peptide synthesis. Nucleic Acids Res., 50, 2022
6HVQ	The structure of Dps from Listeria innocua soaked before soaking experiments with Zn, Co and La Descriptor: DNA protection during starvation protein, LANTHANUM (III) ION Authors: Zeth, K, Okuda, M. Deposit date: 2018-10-11 Release date: 2019-09-04 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Metal Positions and Translocation Pathways of the Dodecameric Ferritin-like Protein Dps. Inorg.Chem., 58, 2019
6HUI	The structure of Dps from Listeria innocua soaked with zinc Descriptor: DNA protection during starvation protein, ZINC ION Authors: Zeth, K, Okuda, M. Deposit date: 2018-10-08 Release date: 2019-09-04 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.995 Å) Cite: Metal Positions and Translocation Pathways of the Dodecameric Ferritin-like Protein Dps. Inorg.Chem., 58, 2019
6HV1	The apo structure of Dps from Listeria innocua before soaking experiments with Zn, Co and La Descriptor: DNA protection during starvation protein Authors: Zeth, K, Okuda, M. Deposit date: 2018-10-10 Release date: 2018-11-14 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.547 Å) Cite: Metal Positions and Translocation Pathways of the Dodecameric Ferritin-like Protein Dps. Inorg.Chem., 58, 2019
6IBQ	Structure of a nonameric RNA duplex at room temperature in ChipX microfluidic device Descriptor: DNA/RNA (5'-R(*CP*GP*UP*GP*AP*UP*CP*G)-D(P*C)-3'), SULFATE ION Authors: de Wijn, R, Olieric, V, Lorber, B, Sauter, C. Deposit date: 2018-11-30 Release date: 2019-05-01 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.55 Å) Cite: A simple and versatile microfluidic device for efficient biomacromolecule crystallization and structural analysis by serial crystallography. Iucrj, 6, 2019
1J4K	SOLUTION STRUCTURE OF THE FHA2 DOMAIN OF RAD53 COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE DERIVED FROM RAD9 Descriptor: DNA REPAIR PROTEIN RAD9, PROTEIN KINASE SPK1 Authors: Byeon, I.-J.L, Yongkiettrakul, S, Tsai, M.-D. Deposit date: 2001-10-03 Release date: 2001-12-05 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Solution structure of the yeast Rad53 FHA2 complexed with a phosphothreonine peptide pTXXL: comparison with the structures of FHA2-pYXL and FHA1-pTXXD complexes. J.Mol.Biol., 314, 2001
1K2N	Solution Structure of the FHA2 domain of Rad53 Complexed with a Phosphothreonyl Peptide Derived from Rad9 Descriptor: DNA repair protein Rad9, Protein Kinase SPK1 Authors: Byeon, I.-J.L, Yongkiettrakul, S, Tsai, M.-D. Deposit date: 2001-09-28 Release date: 2001-12-05 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: Solution structure of the yeast Rad53 FHA2 complexed with a phosphothreonine peptide pTXXL: comparison with the structures of FHA2-pYXL and FHA1-pTXXD complexes. J.Mol.Biol., 314, 2001
1K2M	Solution Structure of the FHA2 Domain of Rad53 Complexed with a Phosphotyrosyl Peptide Derived from Rad9 Descriptor: DNA repair protein Rad9, Protein Kinase SPK1 Authors: Byeon, I.-J.L, Yongkiettrakul, S, Tsai, M.-D. Deposit date: 2001-09-28 Release date: 2001-12-05 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: Solution structure of the yeast Rad53 FHA2 complexed with a phosphothreonine peptide pTXXL: comparison with the structures of FHA2-pYXL and FHA1-pTXXD complexes. J.Mol.Biol., 314, 2001
1J4L	SOLUTION STRUCTURE OF THE FHA2 DOMAIN OF RAD53 COMPLEXED WITH A PHOSPHOTHREONYL PEPTIDE DERIVED FROM RAD9 Descriptor: DNA REPAIR PROTEIN RAD9, PROTEIN KINASE SPK1 Authors: Byeon, I.-J.L, Yongkiettrakul, S, Tsai, M.-D. Deposit date: 2001-10-03 Release date: 2001-12-05 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of the yeast Rad53 FHA2 complexed with a phosphothreonine peptide pTXXL: comparison with the structures of FHA2-pYXL and FHA1-pTXXD complexes. J.Mol.Biol., 314, 2001
1XUE	STRUCTURE OF GTGGAATGCAATGGAAC HAIRPIN, NMR, 10 STRUCTURES Descriptor: DNA (5'-D(*GP*TP*GP*GP*AP*AP*TP*GP*CP*AP*AP*TP*GP*GP*AP*AP*C)-3') Authors: Zhu, L, Chou, S.-H, Reid, B.R. Deposit date: 1996-08-26 Release date: 1997-03-12 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: A single G-to-C change causes human centromere TGGAA repeats to fold back into hairpins. Proc.Natl.Acad.Sci.USA, 93, 1996
5GI6	Crystal Structure of Drosophila melanogaster Dopamine N-Acetyltransferase Bound to CoA and Phenylethylamine Descriptor: 2-PHENYLETHYLAMINE, COENZYME A, Dopamine N-acetyltransferase Authors: Yang, Y.C, Cheng, H.C, Lyu, P.C. Deposit date: 2016-06-22 Release date: 2017-07-05 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystal Structure of Drosophila melanogaster Dopamine N-Acetyltransferase Bound to CoA and Phenylethylamine To Be Published
5GIG	Crystal Structure of Drosophila melanogaster E47D Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-dopamine Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, COENZYME A, Dopamine N-acetyltransferase, ... Authors: Yang, Y.C, Wu, C.Y, Cheng, H.C, Lyu, P.C. Deposit date: 2016-06-23 Release date: 2017-07-05 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal Structure of Drosophila melanogaster E47D Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-dopamine To Be Published
5GII	Crystal Structure of Drosophila melanogaster E47N Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-phenylethylamine Descriptor: COENZYME A, Dopamine N-acetyltransferase, N-(2-phenylethyl)acetamide Authors: Yang, Y.C, Wu, C.Y, Cheng, H.C, Lyu, P.C. Deposit date: 2016-06-23 Release date: 2017-07-05 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.294 Å) Cite: Crystal Structure of Drosophila melanogaster E47N Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-phenylethylamine To Be Published
5GI8	Crystal Structure of Drosophila melanogaster Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-dopamine Descriptor: (4S,5S)-1,2-DITHIANE-4,5-DIOL, COENZYME A, Dopamine N-acetyltransferase, ... Authors: Yang, Y.C, Lin, S.J, Cheng, K.C, Cheng, H.C, Lyu, P.C. Deposit date: 2016-06-22 Release date: 2017-07-05 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal Structure of Drosophila melanogaster Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-dopamine To Be Published
5GIH	Crystal Structure of Drosophila melanogaster E47D Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-phenylethylamine Descriptor: COENZYME A, Dopamine N-acetyltransferase, N-(2-phenylethyl)acetamide Authors: Yang, Y.C, Wu, C.Y, Cheng, H.C, Lyu, P.C. Deposit date: 2016-06-23 Release date: 2017-07-05 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (1.392 Å) Cite: Crystal Structure of Drosophila melanogaster E47D Dopamine N-Acetyltransferase in Ternary Complex with CoA and Acetyl-phenylethylamine To Be Published

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