3ISL
| Crystal structure of ureidoglycine-glyoxylate aminotransferase (pucG) from Bacillus subtilis | Descriptor: | PYRIDOXAL-5'-PHOSPHATE, Purine catabolism protein pucG | Authors: | Costa, R, Cendron, L, Ramazzina, I, Berni, R, Peracchi, A, Percudani, R, Zanotti, G. | Deposit date: | 2009-08-26 | Release date: | 2010-09-15 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.06 Å) | Cite: | Amino acids from purines in GUT bacteria To be Published
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5ZSK
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5ZSP
| NifS from Hydrogenimonas thermophila | Descriptor: | Cysteine desulfurase | Authors: | Nakamura, R, Fujishiro, T, Takahashi, Y. | Deposit date: | 2018-04-29 | Release date: | 2019-05-01 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.57 Å) | Cite: | Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes. Febs J., 287, 2020
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5ZSO
| SufS from Bacillus subtilis, soaked with L-cysteine for 90 sec | Descriptor: | Cysteine desulfurase SufS, DI(HYDROXYETHYL)ETHER, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE | Authors: | Nakamura, R, Fujishiro, T, Takahashi, Y. | Deposit date: | 2018-04-29 | Release date: | 2019-05-01 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Snapshots of PLP-substrate and PLP-product external aldimines as intermediates in two types of cysteine desulfurase enzymes. Febs J., 287, 2020
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3KGX
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3KE3
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3KGW
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3LVM
| Crystal Structure of E.coli IscS | Descriptor: | Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE | Authors: | Shi, R, Proteau, A, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) | Deposit date: | 2010-02-22 | Release date: | 2010-04-21 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structural basis for Fe-S cluster assembly and tRNA thiolation mediated by IscS protein-protein interactions. Plos Biol., 8, 2010
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2BHX
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure A) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-20 | Release date: | 2005-05-19 | Last modified: | 2019-05-22 | Method: | X-RAY DIFFRACTION (1.68 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2BIG
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure I) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-21 | Release date: | 2005-05-19 | Last modified: | 2019-07-24 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2BI3
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure D) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-20 | Release date: | 2005-05-19 | Last modified: | 2019-05-22 | Method: | X-RAY DIFFRACTION (1.69 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2BI2
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure C) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-20 | Release date: | 2005-05-19 | Last modified: | 2019-05-22 | Method: | X-RAY DIFFRACTION (1.69 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2BKW
| Yeast alanine:glyoxylate aminotransferase YFL030w | Descriptor: | ALANINE-GLYOXYLATE AMINOTRANSFERASE 1, GLYOXYLIC ACID, PYRIDOXAL-5'-PHOSPHATE | Authors: | Meyer, P, Liger, D, Leulliot, N, Quevillon-Cheruel, S, Zhou, C.Z, Borel, F, Ferrer, J.L, Poupon, A, Janin, J, van Tilbeurgh, H. | Deposit date: | 2005-02-21 | Release date: | 2005-11-02 | Last modified: | 2015-11-18 | Method: | X-RAY DIFFRACTION (2.57 Å) | Cite: | Crystal Structure and Confirmation of the Alanine:Glyoxylate Aminotransferase Activity of the Yfl030W Yeast Protein Biochimie, 87, 2005
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2BIE
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure H) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-21 | Release date: | 2005-05-19 | Last modified: | 2019-07-24 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2BIA
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure G) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-20 | Release date: | 2005-05-19 | Last modified: | 2019-05-22 | Method: | X-RAY DIFFRACTION (1.77 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2BI9
| Radiation damage of the Schiff base in phosphoserine aminotransferase (structure F) | Descriptor: | CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ... | Authors: | Dubnovitsky, A.P, Ravelli, R.B.G, Popov, A.N, Papageorgiou, A.C. | Deposit date: | 2005-01-20 | Release date: | 2005-05-19 | Last modified: | 2019-05-22 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | Strain Relief at the Active Site of Phosphoserine Aminotransferase Induced by Radiation Damage. Protein Sci., 14, 2005
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2Z9W
| Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal | Descriptor: | 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Aspartate aminotransferase, GLYCEROL, ... | Authors: | Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T. | Deposit date: | 2007-09-26 | Release date: | 2007-11-06 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099 J.Biol.Chem., 283, 2008
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6O12
| E. coli cysteine desulfurase SufS H123A | Descriptor: | CHLORIDE ION, Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE | Authors: | Dunkle, J.A, Frantom, P.A. | Deposit date: | 2019-02-17 | Release date: | 2019-06-26 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues. J.Biol.Chem., 294, 2019
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6O13
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6O11
| E. coli cysteine desulfurase SufS C364A with a Cys-aldimine intermediate | Descriptor: | CHLORIDE ION, Cysteine desulfurase, N-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)-L-CYSTEINE | Authors: | Dunkle, J.A, Frantom, P.A. | Deposit date: | 2019-02-17 | Release date: | 2019-06-26 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues. J.Biol.Chem., 294, 2019
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6O10
| E. coli cysteine desulfurase SufS | Descriptor: | CHLORIDE ION, Cysteine desulfurase, PYRIDOXAL-5'-PHOSPHATE | Authors: | Dunkle, J.A, Frantom, P.A. | Deposit date: | 2019-02-17 | Release date: | 2019-06-26 | Last modified: | 2023-10-11 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues. J.Biol.Chem., 294, 2019
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3A9Z
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3A9Y
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2YOB
| High resolution AGXT_M structure | Descriptor: | 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ... | Authors: | Fabelo-Rosa, I, Mesa-Torres, N, Riverol, D, Yunta, C, Albert, A, Salido, E, Pey, A.L. | Deposit date: | 2012-10-22 | Release date: | 2013-10-30 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | The Role of Protein Denaturation Energetics and Molecular Chaperones in the Aggregation and Mistargeting of Mutants Causing Primary Hyperoxaluria Type I Plos One, 8, 2013
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7XEJ
| SufS with D-cysteine for 5 min | Descriptor: | (2~{S})-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-sulfanyl-propanoic acid, 1,2-ETHANEDIOL, Cysteine desulfurase SufS, ... | Authors: | Nakamiura, R, Fujishiro, T. | Deposit date: | 2022-03-31 | Release date: | 2023-04-05 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.74 Å) | Cite: | X-ray crystallographic snapshots of the thioazolidine formation upon the PLP during inhibition of SufS by D-cysteine to be published
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