PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

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2X68	The ternary complex of PrnB (the second enzyme in pyrrolnitrin biosynthesis pathway), 7-Cl-L-tryptophan and cyanide Descriptor: 7-CHLOROTRYPTOPHAN, CYANIDE ION, PRNB, ... Authors: Zhu, X, van pee, K.-H, Naismith, J.H. Deposit date: 2010-02-15 Release date: 2010-03-02 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.13 Å) Cite: The Ternary Complex of Prnb (the Second Enzyme in Pyrrolnitrin Biosynthesis Pathway), Tryptophan and Cyanide Yields New Mechanistic Insights Into the Indolamine Dioxygenase Superfamily. J.Biol.Chem., 285, 2010
2PLW	Crystal structure of a ribosomal RNA methyltransferase, putative, from Plasmodium falciparum (PF13_0052). Descriptor: Ribosomal RNA methyltransferase, putative, S-ADENOSYLMETHIONINE, ... Authors: Wernimont, A.K, Hassanali, A, Lin, L, Lew, J, Zhao, Y, Ravichandran, M, Wasney, G, Vedadi, M, Kozieradzki, I, Schapira, M, Bochkarev, A, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Hui, R, Qiu, W, Structural Genomics Consortium (SGC) Deposit date: 2007-04-20 Release date: 2007-05-08 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of a ribosomal RNA methyltransferase, putative, from Plasmodium falciparum (PF13_0052). To be Published
1DD5	CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA RIBOSOME RECYCLING FACTOR, RRF Descriptor: ACETIC ACID, RIBOSOME RECYCLING FACTOR Authors: Selmer, M, Al-Karadaghi, S, Hirokawa, G, Kaji, A, Liljas, A. Deposit date: 1999-11-08 Release date: 1999-12-22 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Crystal structure of Thermotoga maritima ribosome recycling factor: a tRNA mimic. Science, 286, 1999
2YY8	Crystal structure of archaeal tRNA-methylase for position 56 (aTrm56) from Pyrococcus horikoshii, complexed with S-adenosyl-L-methionine Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, S-ADENOSYLMETHIONINE, UPF0106 protein PH0461 Authors: Kuratani, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-04-27 Release date: 2008-03-18 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Crystal structure and mutational study of a unique SpoU family archaeal methylase that forms 2'-O-methylcytidine at position 56 of tRNA J.Mol.Biol., 375, 2008
1X3E	Crystal structure of the single-stranded DNA-binding protein from Mycobacterium smegmatis Descriptor: CADMIUM ION, Single-strand binding protein Authors: Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M. Deposit date: 2005-05-04 Release date: 2005-08-15 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr.,Sect.D, 61, 2005
1X3G	Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS Descriptor: CADMIUM ION, Single-strand binding protein Authors: Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M. Deposit date: 2005-05-05 Release date: 2005-08-15 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3 Å) Cite: Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr.,Sect.D, 61, 2005
1X3F	Crystal structure of the single-stranded DNA-binding protein from Mycobacterium SMEGMATIS Descriptor: CADMIUM ION, Single-strand binding protein Authors: Saikrishnan, K, Manjunath, G.P, Singh, P, Jeyakanthan, J, Dauter, Z, Sekar, K, Muniyappa, K, Vijayan, M. Deposit date: 2005-05-05 Release date: 2005-08-15 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association. Acta Crystallogr.,Sect.D, 61, 2005
5XYV	Crystal structure of drosophila melanogaster Rhino chromoshadow domain in complex with Deadlock N-terminal domain Descriptor: Protein deadlock, RHINO Authors: Yu, B.W, Huang, Y. Deposit date: 2017-07-10 Release date: 2018-06-20 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural insights into Rhino-Deadlock complex for germline piRNA cluster specification EMBO Rep., 19, 2018
2ZXI	Structure of Aquifex aeolicus GidA in the form II crystal Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Authors: Numata, T, Osawa, T. Deposit date: 2008-12-24 Release date: 2009-05-19 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon Structure, 17, 2009
3SGL	The crystal structure of MnmC from Yersinia pestis bound with FAD and SAM Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, S-ADENOSYLMETHIONINE, ... Authors: Kim, J, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2011-06-15 Release date: 2011-07-06 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural basis for hypermodification of the wobble uridine in tRNA by bifunctional enzyme MnmC. Bmc Struct.Biol., 13, 2013
4Y7U	Structural analysis of MurU Descriptor: 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, GLYCEROL, ... Authors: Renner-Schneck, M.G, Stehle, T. Deposit date: 2015-02-16 Release date: 2015-03-18 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal Structure of the N-Acetylmuramic Acid alpha-1-Phosphate (MurNAc-alpha 1-P) Uridylyltransferase MurU, a Minimal Sugar Nucleotidyltransferase and Potential Drug Target Enzyme in Gram-negative Pathogens. J.Biol.Chem., 290, 2015
4Y7V	Structural analysis of MurU Descriptor: 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, GLYCEROL, IMIDODIPHOSPHORIC ACID, ... Authors: Renner-Schneck, M.G, Stehle, T. Deposit date: 2015-02-16 Release date: 2015-03-18 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structure of the N-Acetylmuramic Acid alpha-1-Phosphate (MurNAc-alpha 1-P) Uridylyltransferase MurU, a Minimal Sugar Nucleotidyltransferase and Potential Drug Target Enzyme in Gram-negative Pathogens. J.Biol.Chem., 290, 2015
6D31	Structure of human Usb1 with adenosine 5'-monophosphate Descriptor: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, GLYCEROL, ... Authors: Nomura, Y, Montemayor, E.J, Butcher, S.E. Deposit date: 2018-04-14 Release date: 2018-09-05 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural and mechanistic basis for preferential deadenylation of U6 snRNA by Usb1. Nucleic Acids Res., 46, 2018
1GG4	CRYSTAL STRUCTURE OF ESCHERICHIA COLI UDPMURNAC-TRIPEPTIDE D-ALANYL-D-ALANINE-ADDING ENZYME (MURF) AT 2.3 ANGSTROM RESOLUTION Descriptor: UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE-D-ALANYL-D-ALANYL LIGASE Authors: Yan, Y, Munshi, S, Chen, Z. Deposit date: 2000-07-12 Release date: 2000-12-20 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of Escherichia coli UDPMurNAc-tripeptide d-alanyl-d-alanine-adding enzyme (MurF) at 2.3 A resolution. J.Mol.Biol., 304, 2000
4A8E	The structure of a dimeric Xer recombinase from archaea Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, PROBABLE TYROSINE RECOMBINASE XERC-LIKE, ... Authors: Brooks, M.A, ElArnaout, T, Duranda, D, Lisboa, J, Lazar, N, Raynal, B, vanTilbeurgh, H, Serre, M, Quevillon-Cheruel, S. Deposit date: 2011-11-21 Release date: 2012-12-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.99 Å) Cite: The Carboxy-Terminal Alpha N Helix of the Archaeal Xera Tyrosine Recombinase is a Molecular Switch to Control Site-Specific Recombination. Plos One, 8, 2013
2GXU	HERA N-terminal domain in complex with orthophosphate, crystal form 1 Descriptor: PHOSPHATE ION, heat resistant RNA dependent ATPase Authors: Rudolph, M.G, Klostermeier, D. Deposit date: 2006-05-09 Release date: 2006-08-22 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.67 Å) Cite: Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol., 351, 2006
5X15	Crystal structure of Streptomyces coelicolor RraAS2, an unusual member of the RNase ES inhibitor RraA protein family Descriptor: Putative transferase Authors: Park, N, Jo, I, Ha, N.-C. Deposit date: 2017-01-24 Release date: 2017-05-17 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (3.094 Å) Cite: Crystal structure of Streptomyces coelicolor RraAS2, an unusual member of the RNase E inhibitor RraA protein family J. Microbiol., 55, 2017
4K6E	Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain in complex with Mg Descriptor: MAGNESIUM ION, mRNA-decapping enzyme subunit 2 Authors: Aglietti, R.A, Floor, S.N, Gross, J.D. Deposit date: 2013-04-15 Release date: 2013-08-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Active site conformational dynamics are coupled to catalysis in the mRNA decapping enzyme dcp2. Structure, 21, 2013
4KG3	Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain in complex with Mg (E153Q mutation) Descriptor: MAGNESIUM ION, mRNA-decapping enzyme subunit 2 Authors: Aglietti, R.A, Floor, S.N, Gross, J.D. Deposit date: 2013-04-28 Release date: 2013-08-21 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Active site conformational dynamics are coupled to catalysis in the mRNA decapping enzyme dcp2. Structure, 21, 2013
2GXQ	HERA N-terminal domain in complex with AMP, crystal form 1 Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE MONOPHOSPHATE, heat resistant RNA dependent ATPase Authors: Rudolph, M.G, Klostermeier, D. Deposit date: 2006-05-09 Release date: 2006-08-22 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Crystal Structure and Nucleotide Binding of the Thermus thermophilus RNA Helicase Hera N-terminal Domain. J.Mol.Biol., 351, 2006
2ZXH	Structure of Aquifex aeolicus GidA in the form I crystal Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Authors: Numata, T, Osawa, T. Deposit date: 2008-12-24 Release date: 2009-05-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon Structure, 17, 2009
8IU7	Structure of Staphylococcus aureus NrnA (Pde2) in complex with Mg2+ Descriptor: Bifunctional oligoribonuclease and PAP phosphatase NrnA, MAGNESIUM ION Authors: Cheng, K, Wang, Y. Deposit date: 2023-03-23 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Structure of Staphylococcus aureus NrnA in complex with Mg2+. To Be Published
4UZF	R66E mutant of FAD synthetase from Corynebacterium ammoniagenes Descriptor: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION Authors: Martinez-Julvez, M, Herguedas, B, Milagros, M. Deposit date: 2014-09-05 Release date: 2015-04-08 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.52 Å) Cite: Quaternary Organization in a Bifunctional Prokaryotic Fad Synthetase: Involvement of an Arginine at its Adenylyltransferase Module on the Riboflavin Kinase Activity. Biochim.Biophys.Acta, 1854, 2015
5XYW	Crystal structure of drosophila simulans Rhino chromoshadow domain in complex with N-terminal domain Descriptor: GD21652, Rhino Authors: Yu, B.W, Huang, Y. Deposit date: 2017-07-10 Release date: 2018-06-20 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.705 Å) Cite: Structural insights into Rhino-Deadlock complex for germline piRNA cluster specification EMBO Rep., 19, 2018
4Y7T	Structural analysis of MurU Descriptor: GLYCEROL, Nucleotidyl transferase, SULFATE ION Authors: Renner-Schneck, M.G, Stehle, T. Deposit date: 2015-02-16 Release date: 2015-03-18 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structure of the N-Acetylmuramic Acid alpha-1-Phosphate (MurNAc-alpha 1-P) Uridylyltransferase MurU, a Minimal Sugar Nucleotidyltransferase and Potential Drug Target Enzyme in Gram-negative Pathogens. J.Biol.Chem., 290, 2015

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