PDB: 224931 resultsInfo pagesStatus searchChemie searchBIRD

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3ASR	Crystal structure of P domain from Norovirus Funabashi258 stain in the complex with Lewis-a Descriptor: Capsid protein, P-NITROPHENOL, SODIUM ION, ... Authors: Kubota, T, Kumagai, A, Itoh, H, Furukawa, S, Narimatsu, H, Wakita, T, Ishii, K, Takeda, N, Someya, Y, Shirato, H. Deposit date: 2010-12-17 Release date: 2012-01-25 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the recognition of Lewis antigens by genogroup I norovirus J.Virol., 86, 2012
3ASS	Crystal structure of P domain from Norovirus Funabashi258 stain in the complex with Lewis-b Descriptor: Capsid protein, P-NITROPHENOL, SODIUM ION, ... Authors: Kubota, T, Kumagai, A, Itoh, H, Furukawa, S, Narimatsu, H, Wakita, T, Ishii, K, Takeda, N, Someya, Y, Shirato, H. Deposit date: 2010-12-17 Release date: 2012-01-25 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the recognition of Lewis antigens by genogroup I norovirus J.Virol., 86, 2012
3ATT	Crystal structure of Rv3168 with ATP Descriptor: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ... Authors: Kim, Y.-G, Kim, S, Nguyen, C.M.T, Kim, K.-J. Deposit date: 2011-01-13 Release date: 2011-08-03 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of Mycobacterium tuberculosis Rv3168: a putative aminoglycoside antibiotics resistance enzyme Proteins, 79, 2011
3DQ1	Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 2: Structure 24 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQA	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1250 Atmospheres Number 4: Structure 14 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.44 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DUT	The high salt (phosphate) crystal structure of deoxy hemoglobin E (GLU26LYS) at physiological pH (pH 7.35) Descriptor: Hemoglobin subunit alpha, Hemoglobin subunit beta, PHOSPHATE ION, ... Authors: Malashkevich, V.N, Balazs, T.C, Almo, S.C, Hirsch, R.E. Deposit date: 2008-07-17 Release date: 2009-08-04 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.55 Å) Cite: The high salt (phosphate) crystal structure of deoxy hemoglobin E (GLU26LYS) at physiological pH (pH 7.35) To be Published
3DV4	Crystal structure of SAG506-01, tetragonal, crystal 1 Descriptor: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid, Ig-like protein, MAGNESIUM ION, ... Authors: Brooks, C.L, Blackler, R.J, Gerstenbruch, S, Kosma, P, Muller-Loennies, S, Brade, H, Evans, S.V. Deposit date: 2008-07-18 Release date: 2008-12-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Pseudo-symmetry and twinning in crystals of homologous antibody Fv fragments. Acta Crystallogr.,Sect.D, 64, 2008
3DXA	Crystal Structure of the DM1 TCR in complex with HLA-B*4405 and decamer EBV antigen Descriptor: Beta-2-microglobulin, DM1 T cell receptor alpha chain, DM1 T cell receptor beta chain, ... Authors: Archbold, J.K, Macdonald, W.A, Gras, S, Rossjohn, J. Deposit date: 2008-07-23 Release date: 2009-01-27 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition. J.Exp.Med., 206, 2009
3DH9	Crystal Structure of Drosophila Thioredoxin Reductase, wild-type Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Thioredoxin reductase 1 Authors: Eckenroth, B.E, Hondal, R.J, Everse, S.J. Deposit date: 2008-06-17 Release date: 2009-06-16 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Crystal Structure of Drosophila Thioredoxin Reductase, wild-type To be Published
3DLZ	Crystal structure of human haspin in complex with AMP Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ... Authors: Filippakopoulos, P, Eswaran, J, Keates, T, Burgess-Brown, N, Murray, J.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Wickstroem, M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC) Deposit date: 2008-06-30 Release date: 2008-07-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structure and functional characterization of the atypical human kinase haspin. Proc.Natl.Acad.Sci.USA, 106, 2009
3DMS	1.65A crystal structure of isocitrate dehydrogenase from Burkholderia pseudomallei Descriptor: Isocitrate dehydrogenase [NADP] Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2008-07-01 Release date: 2008-07-15 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural basis of the substrate specificity of bifunctional isocitrate dehydrogenase kinase/phosphatase. Biochemistry, 50, 2011
3DQH	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1000 Atmospheres Number 5: Structure 9 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DRJ	Crystal structure of Lactococcal OppA co-crystallized with pTH-related peptide in an open conformation Descriptor: Oligopeptide-binding protein oppA, pTH-related peptide Authors: Berntsson, R.P.-A, Doeven, M.K, Duurkens, R.H, Sengupta, D, Marrink, S.-J, Thunnissen, A.-M, Poolman, B, Slotboom, D.-J. Deposit date: 2008-07-11 Release date: 2009-03-31 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The structural basis for peptide selection by the transport receptor OppA Embo J., 28, 2009
3DSP	Crystal structure of apo copper resistance protein CopK Descriptor: Putative uncharacterized protein copK Authors: Ash, M.-R, Maher, M.J. Deposit date: 2008-07-13 Release date: 2009-03-10 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Unprecedented binding cooperativity between Cu(I) and Cu(II) in the copper resistance protein CopK from Cupriavidus metallidurans CH34: implications from structural studies by NMR spectroscopy and X-ray crystallography J.Am.Chem.Soc., 131, 2009
3DJI	Crystal Structure of Macrophage Migration Inhibitory Factor Bound to an Acetaminophen Dimer Derived from NAPQI Descriptor: CHLORIDE ION, Macrophage migration inhibitory factor, N,N'-(6,6'-dihydroxybiphenyl-3,3'-diyl)diacetamide Authors: Crichlow, G.V, Lolis, E. Deposit date: 2008-06-23 Release date: 2008-12-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural and kinetic analyses of macrophage migration inhibitory factor active site interactions. Biochemistry, 48, 2009
3DK5	Crystal Structure of Apo-GlmU from Mycobacterium tuberculosis Descriptor: Bifunctional protein glmU, MAGNESIUM ION Authors: Verma, S.K, Prakash, B. Deposit date: 2008-06-24 Release date: 2009-05-19 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.23 Å) Cite: PknB-mediated phosphorylation of a novel substrate, N-acetylglucosamine-1-phosphate uridyltransferase, modulates its acetyltransferase activity. J.Mol.Biol., 386, 2009
3APG	Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus Descriptor: Beta-glucosidase, GLYCEROL Authors: Kado, Y, Inoue, T, Ishikawa, K. Deposit date: 2010-10-15 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus TO BE PUBLISHED
3AUW	Cytoplasmic domain of inward rectifier potassium channel Kir3.2 in complex with cadmium Descriptor: CADMIUM ION, ETHANOL, MAGNESIUM ION, ... Authors: Inanobe, A, Kurachi, Y. Deposit date: 2011-02-17 Release date: 2011-10-05 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.56 Å) Cite: Inverse agonist-like action of cadmium on G-protein-gated inward-rectifier K(+) channels Biochem.Biophys.Res.Commun., 407, 2011
3ATB	Crystal Structure of the Kir3.2 Cytoplasmic Domain (Na+-free crystal soaked in 10 mM Gadolinium chloride) Descriptor: GADOLINIUM ATOM, Potassium inwardly-rectifying channel, subfamily J, ... Authors: Inanobe, A, Kurachi, Y. Deposit date: 2010-12-28 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.51 Å) Cite: Interactions of cations with the cytoplasmic pores of inward rectifier K(+) channels in the closed state J.Biol.Chem., 286, 2011
3ATD	Crystal Structure of the Kir3.2 Cytoplasmic Domain (Na+-free crystal soaked in 10 mM Gadolinium chloride and 10 mM magnesium chloride) Descriptor: GADOLINIUM ATOM, Potassium inwardly-rectifying channel, subfamily J, ... Authors: Inanobe, A, Kurachi, Y. Deposit date: 2010-12-28 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.01 Å) Cite: Interactions of cations with the cytoplasmic pores of inward rectifier K(+) channels in the closed state J.Biol.Chem., 286, 2011
3ATF	Crystal Structure of the Kir3.2 Cytoplasmic Domain (Na+-free crystal soaked in 200 mM Cesium chloride) Descriptor: CESIUM ION, ETHANOL, MAGNESIUM ION, ... Authors: Inanobe, A, Kurachi, Y. Deposit date: 2010-12-28 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Interactions of cations with the cytoplasmic pores of inward rectifier K(+) channels in the closed state J.Biol.Chem., 286, 2011
3AUO	DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP Descriptor: 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ... Authors: Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2011-02-11 Release date: 2012-01-25 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA. J.Mol.Biol., 417, 2012
3AS5	MamA AMB-1 P212121 Descriptor: MAGNESIUM ION, MamA Authors: Zeytuni, N, Davidov, G, Zarivach, R. Deposit date: 2010-12-10 Release date: 2011-07-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Self-recognition mechanism of MamA, a magnetosome-associated TPR-containing protein, promotes complex assembly Proc.Natl.Acad.Sci.USA, 108, 2011
3AST	Crystal structure of P domain Q389N mutant from Norovirus Funabashi258 stain in the complex with Lewis-b Descriptor: Capsid protein, P-NITROPHENOL, SODIUM ION, ... Authors: Kubota, T, Kumagai, A, Itoh, H, Furukawa, S, Narimatsu, H, Wakita, T, Ishii, K, Takeda, N, Someya, Y, Shirato, H. Deposit date: 2010-12-17 Release date: 2012-01-25 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structural basis for the recognition of Lewis antigens by genogroup I norovirus J.Virol., 86, 2012
3ASU	Crystal structure of serine dehydrogenase from Escherichia coli Descriptor: Short-chain dehydrogenase/reductase SDR Authors: Yamazawa, R, Nakajima, Y, Yoshimoto, T, Ito, K. Deposit date: 2010-12-21 Release date: 2011-10-12 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of serine dehydrogenase from Escherichia coli: important role of the C-terminal region for closed-complex formation. J.Biochem., 149, 2011

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