PDB: 1001 resultsInfo pagesStatus searchChemie searchBIRD

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7R7C	State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model Descriptor: 25S rRNA, 25S rRNA (cytosine(2870)-C(5))-methyltransferase, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, ... Authors: Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. Deposit date: 2021-06-24 Release date: 2022-11-09 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.71 Å) Cite: Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
7R72	State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 local model Descriptor: 25S rRNA, 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase, 5.8S rRNA, ... Authors: Cruz, V.E, Sekulski, K, Peddada, N, Erzberger, J.P. Deposit date: 2021-06-24 Release date: 2022-11-09 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.07 Å) Cite: Sequence-specific remodeling of a topologically complex RNP substrate by Spb4. Nat.Struct.Mol.Biol., 29, 2022
2RBS	(r)(+)-3-chloro-1-phenyl-1-propanol in complex with T4 lysozyme L99A/M102Q Descriptor: (1R)-3-chloro-1-phenylpropan-1-ol, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-19 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.557 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RAZ	4-(methylthio)nitrobenzene in complex with T4 lysozyme L99A Descriptor: 1-(methylsulfanyl)-4-nitrobenzene, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-17 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.641 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RBP	2-(n-propylthio)ethanol in complex with T4 lysozyme L99A/M102Q Descriptor: 2-(propylsulfanyl)ethanol, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-19 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.467 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RBN	N-phenylglycinonitrile in complex with T4 lysozyme L99A/M102Q Descriptor: (phenylamino)acetonitrile, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-19 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.29 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RB0	2,6-difluorobenzylbromide complex with T4 lysozyme L99A Descriptor: 2-(bromomethyl)-1,3-difluorobenzene, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-17 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RBQ	3-methylbenzylazide in complex with T4 L99A/M102Q Descriptor: 1-(azidomethyl)-3-methylbenzene, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-19 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.633 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RBO	2-nitrothiophene in complex with T4 lysozyme L99A/M102Q Descriptor: 2-nitrothiophene, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-19 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.29 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
2RAY	beta-chlorophenetole in complex with T4 lysozyme L99A Descriptor: (2-chloroethoxy)benzene, Lysozyme, PHOSPHATE ION Authors: Graves, A.P, Boyce, S.E, Shoichet, B.K. Deposit date: 2007-09-17 Release date: 2008-03-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.798 Å) Cite: Rescoring docking hit lists for model cavity sites: predictions and experimental testing. J.Mol.Biol., 377, 2008
6C0F	Yeast nucleolar pre-60S ribosomal subunit (state 2) Descriptor: 5.8S rRNA, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ... Authors: Sanghai, Z.A, Miller, L, Barandun, J, Hunziker, M, Chaker-Margot, M, Klinge, S. Deposit date: 2017-12-29 Release date: 2018-03-14 Last modified: 2020-01-08 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Modular assembly of the nucleolar pre-60S ribosomal subunit. Nature, 556, 2018
2WQ3	GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating chloride and nitrate Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4, NITRATE ION Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2009-08-12 Release date: 2009-11-03 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.22 Å) Cite: A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2WPZ	GCN4 leucine zipper mutant with two VxxNxxx motifs coordinating chloride Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4 Authors: Zeth, K, Hartmann, M.D, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B. Deposit date: 2009-08-12 Release date: 2009-11-03 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.25 Å) Cite: A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2WQ0	GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating chloride Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4 Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2009-08-12 Release date: 2009-11-03 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.12 Å) Cite: A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2WG6	Proteasome-Activating Nucleotidase (PAN) N-domain (57-134) from Archaeoglobus fulgidus fused to GCN4, P61A Mutant Descriptor: GENERAL CONTROL PROTEIN GCN4, PROTEASOME-ACTIVATING NUCLEOTIDASE Authors: Hartmann, M.D, Djuranovic, S, Ursinus, A, Zeth, K, Lupas, A.N. Deposit date: 2009-04-15 Release date: 2009-04-28 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure and Activity of the N-Terminal Substrate Recognition Domains in Proteasomal Atpases. Mol.Cell, 34, 2009
2WQ2	GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating iodide Descriptor: GENERAL CONTROL PROTEIN GCN4, IODIDE ION Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2009-08-12 Release date: 2009-11-03 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.36 Å) Cite: A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2WQ1	GCN4 leucine zipper mutant with three IxxNTxx motifs coordinating bromide Descriptor: BROMIDE ION, GENERAL CONTROL PROTEIN GCN4 Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2009-08-12 Release date: 2009-11-03 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.08 Å) Cite: A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2WPY	GCN4 leucine zipper mutant with one VxxNxxx motif coordinating chloride Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4 Authors: Zeth, K, Hartmann, M.D, Albrecht, R, Lupas, A.N, Hernandez Alvarez, B. Deposit date: 2009-08-12 Release date: 2009-11-03 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.75 Å) Cite: A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core. Proc.Natl.Acad.Sci.USA, 106, 2009
2YNY	Salmonella enterica SadA 255-302 fused to GCN4 adaptors (SadAK1) Descriptor: GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN Authors: Hartmann, M.D, Hernandez Alvarez, B, Albrecht, R, Lupas, A.N. Deposit date: 2012-10-20 Release date: 2012-12-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Complete Fiber Structures of Complex Trimeric Autotransporter Adhesins Conserved in Enterobacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
2YO1	Salmonella enterica SadA 1049-1304 fused to GCN4 adaptors (SadAK9- cfII) Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2012-10-20 Release date: 2012-12-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Complete Fiber Structures of Complex Trimeric Autotransporter Adhesins Conserved in Enterobacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
2YO0	Salmonella enterica SadA 1049-1304 fused to GCN4 adaptors (SadAK9-cfI) Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2012-10-20 Release date: 2012-12-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Complete Fiber Structures of Complex Trimeric Autotransporter Adhesins Conserved in Enterobacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
2YO2	Salmonella enterica SadA 255-358 fused to GCN4 adaptors (SadAK12) Descriptor: GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2012-10-20 Release date: 2012-12-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Complete Fiber Structures of Complex Trimeric Autotransporter Adhesins Conserved in Enterobacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
2YNZ	Salmonella enterica SadA 823-947 fused to a GCN4 adaptor (SadAK5) Descriptor: GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN, NITRATE ION Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2012-10-20 Release date: 2012-12-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Complete Fiber Structures of Complex Trimeric Autotransporter Adhesins Conserved in Enterobacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
2YO3	Salmonella enterica SadA 1185-1386 fused to GCN4 adaptors (SadAK14) Descriptor: CHLORIDE ION, GENERAL CONTROL PROTEIN GCN4, PUTATIVE INNER MEMBRANE PROTEIN Authors: Hartmann, M.D, Hernandez Alvarez, B, Lupas, A.N. Deposit date: 2012-10-20 Release date: 2012-12-12 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Complete Fiber Structures of Complex Trimeric Autotransporter Adhesins Conserved in Enterobacteria. Proc.Natl.Acad.Sci.USA, 109, 2012
5IDQ	Crystal structure of a Short-chain dehydrogenase/reductase (SDR)from Burkholderia vietnamiensis at 1.55 A resolution Descriptor: Short-chain dehydrogenase/reductase SDR Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2016-02-24 Release date: 2016-05-04 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of a Short-chain dehydrogenase/reductase (SDR)from Burkholderia vietnamiensis at 1.55 A resolution to be published

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