Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CP2
DownloadVisualize
BU of 8cp2 by Molmil
Structure of Aspartate-N-hydroxylase (FzmM)from Streptomyces sp. V2: complex with NADPH and L-aspartate
Descriptor: 3-NITROPROPANOIC ACID, ASPARTIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Rotilio, L, Mattevi, A.
Deposit date:2023-03-01
Release date:2023-07-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A biosynthetic aspartate N-hydroxylase performs successive oxidations by holding intermediates at a site away from the catalytic center.
J.Biol.Chem., 299, 2023
5XKI
DownloadVisualize
BU of 5xki by Molmil
Crystal structure of baculoviral sulfhydryl oxidase AcP33 (wide type)
Descriptor: FAD-linked sulfhydryl oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Kuang, W, Hu, Z, Gong, P.
Deposit date:2017-05-07
Release date:2017-09-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Three Conserved Regions in Baculovirus Sulfhydryl Oxidase P33 Are Critical for Enzymatic Activity and Function
J. Virol., 91, 2017
8OT8
DownloadVisualize
BU of 8ot8 by Molmil
Alditol oxidase from Actinomycetota bacterium in complex with D-xylulose
Descriptor: D-XYLULOSE, FAD-binding protein, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Rotilio, L, Mattevi, A.
Deposit date:2023-04-20
Release date:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery and biochemical characterization of thermostable glycerol oxidases.
Appl.Microbiol.Biotechnol., 108, 2024
3TK0
DownloadVisualize
BU of 3tk0 by Molmil
mutation of sfALR
Descriptor: FAD-linked sulfhydryl oxidase ALR, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Dong, M, Bahnson, B.J.
Deposit date:2011-08-25
Release date:2012-08-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.611 Å)
Cite:sfALR mutation
To be Published
5KMP
DownloadVisualize
BU of 5kmp by Molmil
The structure of G164E variant of type II NADH dehydrogenase from Caldalkalibacillus thermarum
Descriptor: FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Cook, G.M, Aragao, D, Nakatani, Y.
Deposit date:2016-06-27
Release date:2017-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The mechanism of catalysis by type-II NADH:quinone oxidoreductases.
Sci Rep, 7, 2017
3SGL
DownloadVisualize
BU of 3sgl by Molmil
The crystal structure of MnmC from Yersinia pestis bound with FAD and SAM
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, S-ADENOSYLMETHIONINE, ...
Authors:Kim, J, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2011-06-15
Release date:2011-07-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for hypermodification of the wobble uridine in tRNA by bifunctional enzyme MnmC.
Bmc Struct.Biol., 13, 2013
4IFZ
DownloadVisualize
BU of 4ifz by Molmil
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, Mn(II)-AMP product bound form
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, MANGANESE (II) ION, ...
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2012-12-15
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9012 Å)
Cite:The TP0796 Lipoprotein of Treponema pallidum Is a Bimetal-dependent FAD Pyrophosphatase with a Potential Role in Flavin Homeostasis.
J.Biol.Chem., 288, 2013
4IFW
DownloadVisualize
BU of 4ifw by Molmil
Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, ADP inhibited form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Thiamine biosynthesis lipoprotein ApbE
Authors:Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V.
Deposit date:2012-12-15
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3001 Å)
Cite:The TP0796 Lipoprotein of Treponema pallidum Is a Bimetal-dependent FAD Pyrophosphatase with a Potential Role in Flavin Homeostasis.
J.Biol.Chem., 288, 2013
5L6F
DownloadVisualize
BU of 5l6f by Molmil
Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Rozeboom, H.J, Ferrari, A.R, Fraaije, M.W.
Deposit date:2016-05-30
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of a Xylooligosaccharide Oxidase from Myceliophthora thermophila C1.
J.Biol.Chem., 291, 2016
5L6G
DownloadVisualize
BU of 5l6g by Molmil
Xylooligosaccharide oxidase from Myceliophthora thermophila C1 in complex with Xylose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, FAD linked oxidase-like protein, ...
Authors:Rozeboom, H.J, Ferrari, A.R, Fraaije, M.W.
Deposit date:2016-05-30
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery of a Xylooligosaccharide Oxidase from Myceliophthora thermophila C1.
J.Biol.Chem., 291, 2016
3U5S
DownloadVisualize
BU of 3u5s by Molmil
Selenium Substituted Human Augmenter of Liver Regeneration
Descriptor: FAD-linked sulfhydryl oxidase ALR, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Dong, M, Bahnson, B.J.
Deposit date:2011-10-11
Release date:2012-10-17
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:(77)Se enrichment of proteins expands the biological NMR toolbox.
J.Mol.Biol., 425, 2013
8QT6
DownloadVisualize
BU of 8qt6 by Molmil
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase
Descriptor: FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
Deposit date:2023-10-12
Release date:2024-07-24
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.29 Å)
Cite:Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 2024
8QT7
DownloadVisualize
BU of 8qt7 by Molmil
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase in complex with NADPH
Descriptor: FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
Deposit date:2023-10-12
Release date:2024-07-24
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 2024
8P4X
DownloadVisualize
BU of 8p4x by Molmil
FAD_ox bound dark state structure of PdLCry
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION, Putative light-receptive cryptochrome (Fragment)
Authors:Behrmann, E, Behrmann, H.
Deposit date:2023-05-23
Release date:2023-11-08
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:A marine cryptochrome with an inverse photo-oligomerization mechanism.
Nat Commun, 14, 2023
4HB9
DownloadVisualize
BU of 4hb9 by Molmil
Crystal structure of a putative FAD containing monooxygenase from Photorhabdus luminescens subsp. laumondii TTO1 (Target PSI-012791)
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, Similarities with probable monooxygenase
Authors:Sampathkumar, P, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-09-27
Release date:2012-10-17
Last modified:2022-06-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Stilbene epoxidation and detoxification in a Photorhabdus luminescens -nematode symbiosis.
J.Biol.Chem., 292, 2017
3G6K
DownloadVisualize
BU of 3g6k by Molmil
Crystal Structure of Candida glabrata FMN Adenylyltransferase in complex with FAD and Inorganic Pyrophosphate
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FMN adenylyltransferase, MAGNESIUM ION, ...
Authors:Huerta, C, Machius, M, Zhang, H.
Deposit date:2009-02-06
Release date:2009-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure and mechanism of a eukaryotic FMN adenylyltransferase.
J.Mol.Biol., 389, 2009
8QQ1
DownloadVisualize
BU of 8qq1 by Molmil
SpNOX dehydrogenase domain, mutant F397W in complex with Flavin adenine dinucleotide (FAD)
Descriptor: BROMIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Oxidoreductase
Authors:Humm, A.S, Dupeux, F, Vermot, A, Petit-Harleim, I, Fieschi, F, Marquez, J.A.
Deposit date:2023-10-03
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.941 Å)
Cite:X-ray structure and enzymatic study of a bacterial NADPH oxidase highlight the activation mechanism of eukaryotic NOX.
Elife, 13, 2024
8QTA
DownloadVisualize
BU of 8qta by Molmil
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase F397A mutant in complex with NADPH
Descriptor: FAD-binding FR-type domain-containing protein, FLAVIN-ADENINE DINUCLEOTIDE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Dubach, V.R.A, San Segundo-Acosta, P, Murphy, B.J.
Deposit date:2023-10-12
Release date:2024-07-24
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Structural and mechanistic insights into Streptococcus pneumoniae NADPH oxidase.
Nat.Struct.Mol.Biol., 2024
6BZQ
DownloadVisualize
BU of 6bzq by Molmil
Crystal structure of halogenase PltM in complex with FAD
Descriptor: BROMIDE ION, CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-25
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZZ
DownloadVisualize
BU of 6bzz by Molmil
Crystal structure of halogenase PltM in complex with partially bound FAD
Descriptor: CALCIUM ION, FLAVIN-ADENINE DINUCLEOTIDE, Halogenase PltM
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-26
Release date:2019-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
6BZT
DownloadVisualize
BU of 6bzt by Molmil
Crystal structure of halogenase PltM L111Y mutant in complex with FAD
Descriptor: BROMIDE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-26
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019
7X7J
DownloadVisualize
BU of 7x7j by Molmil
Ancestral L-Lys oxidase (AncLLysO-2) L-Lys binding form
Descriptor: FAD dependent enzyme, FLAVIN-ADENINE DINUCLEOTIDE, LYSINE
Authors:Motoyama, T, Ishida, C, Hasebe, F, Ito, S, Nakano, S.
Deposit date:2022-03-09
Release date:2023-01-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Reaction Mechanism of Ancestral l-Lys alpha-Oxidase from Caulobacter Species Studied by Biochemical, Structural, and Computational Analysis
Acs Omega, 7, 2022
7X7I
DownloadVisualize
BU of 7x7i by Molmil
Ancestral L-Lys oxidase (AncLLysO-2) ligand free form
Descriptor: FAD dependent enzyme, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Motoyama, T, Ishida, C, Hasebe, F, Ito, S, Nakano, S.
Deposit date:2022-03-09
Release date:2023-01-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction Mechanism of Ancestral l-Lys alpha-Oxidase from Caulobacter Species Studied by Biochemical, Structural, and Computational Analysis
Acs Omega, 7, 2022
4QFC
DownloadVisualize
BU of 4qfc by Molmil
Co-crystal structure of compound 3 (4-hydroxy-6-[2-(7-hydroxy-2-oxo-4-phenyl-2h-chromen-6-yl)ethyl]pyridazin-3(2h)-one) and FAD bound to human DAAO at 2.4A
Descriptor: 4-hydroxy-6-[2-(7-hydroxy-2-oxo-4-phenyl-2H-chromen-6-yl)ethyl]pyridazin-3(2H)-one, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Lukacs, C.M, Chun, L.
Deposit date:2014-05-20
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Novel human D-amino acid oxidase inhibitors stabilize an active-site lid-open conformation.
Biosci.Rep., 34, 2014
6BZA
DownloadVisualize
BU of 6bza by Molmil
Crystal structure of halogenase PltM in complex with phloroglucinol and FAD
Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Halogenase PltM, ...
Authors:Pang, A.H, Garneau-Tsodikova, S, Tsodikov, O.V.
Deposit date:2017-12-22
Release date:2019-03-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Unusual substrate and halide versatility of phenolic halogenase PltM.
Nat Commun, 10, 2019

226262

數據於2024-10-16公開中

PDB statisticsPDBj update infoContact PDBjnumon