8PIE
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![BU of 8pie by Molmil](/molmil-images/mine/8pie) | Crystal structure of the human nucleoside diphosphate kinase B domain in complex with the product AT-8500 formed by catalysis of compound AT-9010 | Descriptor: | GLYCEROL, Nucleoside diphosphate kinase B, [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-fluoranyl-4-methyl-3-oxidanyl-oxolan-2-yl]methyl phosphono hydrogen phosphate | Authors: | Feracci, M, Chazot, A, Ferron, F, Alvarez, K, Canard, B. | Deposit date: | 2023-06-21 | Release date: | 2024-07-31 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | The activation chain of the broad-spectrum antiviral bemnifosbuvir at atomic resolution Plos Biol., 2024
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8PO6
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![BU of 8po6 by Molmil](/molmil-images/mine/8po6) | Structure of Escherichia coli HrpA apo form | Descriptor: | ATP-dependent RNA helicase HrpA, PHOSPHATE ION | Authors: | Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. | Deposit date: | 2023-07-03 | Release date: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.66 Å) | Cite: | Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
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8PO7
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![BU of 8po7 by Molmil](/molmil-images/mine/8po7) | Structure of Escherichia coli HrpA in complex with ADP and dinucleotide dCdC | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase HrpA, DNA (5'-D(P*CP*C)-3'), ... | Authors: | Xin, B.G, Yuan, L.G, Zhang, L.L, Xie, S.M, Liu, N.N, Ai, X, Li, H.H, Rety, S, Xi, X.G. | Deposit date: | 2023-07-03 | Release date: | 2024-05-08 | Last modified: | 2024-05-15 | Method: | X-RAY DIFFRACTION (2.26 Å) | Cite: | Structural insights into the N-terminal APHB domain of HrpA: mediating canonical and i-motif recognition. Nucleic Acids Res., 52, 2024
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7OA3
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![BU of 7oa3 by Molmil](/molmil-images/mine/7oa3) | Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium hexammine co-crystallized form) | Descriptor: | Chili RNA Aptamer, DMHBO+, GUANOSINE-5'-TRIPHOSPHATE, ... | Authors: | Mieczkowski, M, Pena, V, Hoebartner, C. | Deposit date: | 2021-04-19 | Release date: | 2021-06-16 | Last modified: | 2024-06-19 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine. Nat Commun, 12, 2021
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7OAX
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![BU of 7oax by Molmil](/molmil-images/mine/7oax) | Crystal structure of the Chili RNA aptamer in complex with DMHBO+ | Descriptor: | CHLORIDE ION, Chili RNA Aptamer, DMHBO+, ... | Authors: | Mieczkowski, M, Pena, V, Hoebartner, C. | Deposit date: | 2021-04-20 | Release date: | 2021-06-16 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.24 Å) | Cite: | Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine. Nat Commun, 12, 2021
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7OAW
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![BU of 7oaw by Molmil](/molmil-images/mine/7oaw) | Crystal structure of the Chili RNA aptamer in complex with DMHBI+ | Descriptor: | CHLORIDE ION, Chili RNA Aptamer, DMHBI+, ... | Authors: | Mieczkowski, M, Pena, V, Hoebartner, C. | Deposit date: | 2021-04-20 | Release date: | 2021-06-16 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine. Nat Commun, 12, 2021
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7OAV
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![BU of 7oav by Molmil](/molmil-images/mine/7oav) | Crystal structure of Chili RNA aptamer in complex with DMHBO+ (Iridium III hexammine soaking crystal form) | Descriptor: | CHLORIDE ION, Chili RNA Aptamer, DMHBO+, ... | Authors: | Mieczkowski, M, Pena, V, Hoebartner, C. | Deposit date: | 2021-04-20 | Release date: | 2021-06-16 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.99 Å) | Cite: | Large Stokes shift fluorescence activation in an RNA aptamer by intermolecular proton transfer to guanine. Nat Commun, 12, 2021
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8G2N
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![BU of 8g2n by Molmil](/molmil-images/mine/8g2n) | |
6FWS
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![BU of 6fws by Molmil](/molmil-images/mine/6fws) | Structure of DinG in complex with ssDNA and ADPBeF | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase DinG, BERYLLIUM TRIFLUORIDE ION, ... | Authors: | Cheng, K, Wigley, D. | Deposit date: | 2018-03-07 | Release date: | 2018-12-19 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | DNA translocation mechanism of an XPD family helicase. Elife, 7, 2018
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7P0M
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![BU of 7p0m by Molmil](/molmil-images/mine/7p0m) | |
7P09
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![BU of 7p09 by Molmil](/molmil-images/mine/7p09) | |
7P0B
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![BU of 7p0b by Molmil](/molmil-images/mine/7p0b) | |
2HGM
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![BU of 2hgm by Molmil](/molmil-images/mine/2hgm) | NMR structure of the second qRRM domain of human hnRNP F | Descriptor: | Heterogeneous nuclear ribonucleoprotein F | Authors: | Dominguez, C, Allain, F.H.-T. | Deposit date: | 2006-06-27 | Release date: | 2006-07-11 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition. Nucleic Acids Res., 34, 2006
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7OXO
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![BU of 7oxo by Molmil](/molmil-images/mine/7oxo) | human LonP1, R-state, incubated in AMPPCP | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial | Authors: | Abrahams, J.P, Mohammed, I, Schmitz, K.A, Schenck, N, Maier, T. | Deposit date: | 2021-06-22 | Release date: | 2021-12-22 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.9 Å) | Cite: | Catalytic cycling of human mitochondrial Lon protease. Structure, 30, 2022
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2HGL
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![BU of 2hgl by Molmil](/molmil-images/mine/2hgl) | NMR structure of the first qRRM domain of human hnRNP F | Descriptor: | Heterogeneous nuclear ribonucleoprotein F | Authors: | Dominguez, C, Allain, F.H.-T. | Deposit date: | 2006-06-27 | Release date: | 2006-07-11 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition. Nucleic Acids Res., 34, 2006
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2HGN
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![BU of 2hgn by Molmil](/molmil-images/mine/2hgn) | NMR structure of the third qRRM domain of human hnRNP F | Descriptor: | Heterogeneous nuclear ribonucleoprotein F | Authors: | Dominguez, C, Allain, F.H.-T. | Deposit date: | 2006-06-27 | Release date: | 2006-07-11 | Last modified: | 2024-05-29 | Method: | SOLUTION NMR | Cite: | NMR structure of the three quasi RNA recognition motifs (qRRMs) of human hnRNP F and interaction studies with Bcl-x G-tract RNA: a novel mode of RNA recognition. Nucleic Acids Res., 34, 2006
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6FWR
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![BU of 6fwr by Molmil](/molmil-images/mine/6fwr) | Structure of DinG in complex with ssDNA | Descriptor: | ATP-dependent DNA helicase DinG, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), IRON/SULFUR CLUSTER | Authors: | Cheng, K, Wigley, D.B. | Deposit date: | 2018-03-07 | Release date: | 2018-12-19 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | DNA translocation mechanism of an XPD family helicase. Elife, 7, 2018
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8HZJ
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![BU of 8hzj by Molmil](/molmil-images/mine/8hzj) | A new fluorescent RNA aptamer bound with N571 | Descriptor: | (5~{Z})-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Huang, K.Y, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8HZD
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![BU of 8hzd by Molmil](/molmil-images/mine/8hzd) | A new fluorescent RNA aptamer bound with N618 | Descriptor: | 4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile, MAGNESIUM ION, RNA (36-MER) | Authors: | Song, Q.Q, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (1.87 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8HZE
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![BU of 8hze by Molmil](/molmil-images/mine/8hze) | A new fluorescent RNA aptamer bound with N | Descriptor: | (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Huang, K.Y, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (1.59 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8HZM
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![BU of 8hzm by Molmil](/molmil-images/mine/8hzm) | A new fluorescent RNA aptamer bound with N, manganese soak | Descriptor: | (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Huang, K.Y, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8HZK
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![BU of 8hzk by Molmil](/molmil-images/mine/8hzk) | A new fluorescent RNA aptamer bound with N, iridium hexammine soak | Descriptor: | (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, DI(HYDROXYETHYL)ETHER, IRIDIUM HEXAMMINE ION, ... | Authors: | Huang, K.Y, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8HZF
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![BU of 8hzf by Molmil](/molmil-images/mine/8hzf) | A new fluorescent RNA aptamer bound with N565 | Descriptor: | (5~{Z})-5-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-2-[(~{E})-2-(4-hydroxyphenyl)ethenyl]-3-methyl-imidazol-4-one, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Huang, K.Y, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8HZL
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![BU of 8hzl by Molmil](/molmil-images/mine/8hzl) | A new fluorescent RNA aptamer_III bound with N | Descriptor: | (5~{Z})-5-[[4-[2-hydroxyethyl(methyl)amino]phenyl]methylidene]-3-methyl-2-[(~{E})-2-phenylethenyl]imidazol-4-one, MAGNESIUM ION, RNA (84-MER) | Authors: | Huang, K.Y, Ren, A.M. | Deposit date: | 2023-01-09 | Release date: | 2024-06-19 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift. Nat.Chem.Biol., 2024
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8OST
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![BU of 8ost by Molmil](/molmil-images/mine/8ost) | Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A | Descriptor: | Protein lin-28 homolog A, Terminal uridylyltransferase 4, ZINC ION, ... | Authors: | Gilbert, R.J, Yi, G, Ye, M. | Deposit date: | 2023-04-20 | Release date: | 2024-07-17 | Last modified: | 2024-08-07 | Method: | ELECTRON MICROSCOPY (3.69 Å) | Cite: | Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs. Nat.Struct.Mol.Biol., 2024
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