Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VJS
DownloadVisualize
BU of 5vjs by Molmil
De Novo Photosynthetic Reaction Center Protein Equipped with Heme B, a synthetic Zn porphyrin, and Zn(II) cations
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Reaction Center Maquette, ...
Authors:Ennist, N.M, Dutton, P.L, Stayrook, S.E, Moser, C.C.
Deposit date:2017-04-19
Release date:2018-04-25
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:De novo protein design of photochemical reaction centers.
Nat Commun, 13, 2022
1XVL
DownloadVisualize
BU of 1xvl by Molmil
The three-dimensional structure of MntC from Synechocystis 6803
Descriptor: MANGANESE (II) ION, Mn transporter
Authors:Rukhman, V, Anati, R, Melamed-Frank, M, Bhattacharyya-Pakrasi, M, Pakrasi, H.B, Adir, N.
Deposit date:2004-10-28
Release date:2005-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The MntC crystal structure suggests that import of Mn2+ in cyanobacteria is redox controlled.
J.Mol.Biol., 348, 2005
4IC5
DownloadVisualize
BU of 4ic5 by Molmil
Crystal structure of Deg5
Descriptor: CALCIUM ION, Protease Do-like 5, chloroplastic
Authors:Gong, W, Sun, W, Fan, H, Gao, F, Liu, L.
Deposit date:2012-12-10
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.607 Å)
Cite:The structures of Arabidopsis Deg5 and Deg8 reveal new insights into HtrA proteases
Acta Crystallogr.,Sect.D, 69, 2013
2PRC
DownloadVisualize
BU of 2prc by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (UBIQUINONE-2 COMPLEX)
Descriptor: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
Authors:Lancaster, C.R.D, Michel, H.
Deposit date:1997-07-29
Release date:1998-11-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The coupling of light-induced electron transfer and proton uptake as derived from crystal structures of reaction centres from Rhodopseudomonas viridis modified at the binding site of the secondary quinone, QB.
Structure, 5, 1997
8B6E
DownloadVisualize
BU of 8b6e by Molmil
crystal structure of the DNA-binding short chromatophore-targeted protein sCTP-23166 from Paulinella chromatophora
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, sCTP-23166
Authors:Macorano, L, Applegate, V, Hoeppner, A, Smits, S.H.J, Nowack, E.C.M.
Deposit date:2022-09-27
Release date:2023-07-12
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:DNA-binding and protein structure of nuclear factors likely acting in genetic information processing in the Paulinella chromatophore.
Proc.Natl.Acad.Sci.USA, 120, 2023
4A7D
DownloadVisualize
BU of 4a7d by Molmil
X-ray crystal structure of HEWL flash-cooled at high pressure
Descriptor: CHLORIDE ION, LYSOZYME C, SODIUM ION
Authors:Burkhardt, A, Warmer, M, Panneerselvam, S, Wagner, A, Reimer, R, Hohenberg, H, Meents, A.
Deposit date:2011-11-14
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:Fast High-Pressure Freezing of Protein Crystals in Their Mother Liquor
Acta Crystallogr.,Sect.F, 68, 2012
1DV6
DownloadVisualize
BU of 1dv6 by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE WITH THE PROTON TRANSFER INHIBITOR ZN2+
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CHLORIDE ION, ...
Authors:Axelrod, H.L, Abresch, E.C, Paddock, M.L, Okamura, M.Y, Feher, G.
Deposit date:2000-01-19
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers.
Proc.Natl.Acad.Sci.USA, 97, 2000
1DS8
DownloadVisualize
BU of 1ds8 by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-NEUTRAL DQAQB STATE WITH THE PROTON TRANSFER INHIBITOR CD2+
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CADMIUM ION, ...
Authors:Axelrod, H.L, Abresch, E.C, Paddock, M.L, Okamura, M.Y, Feher, G.
Deposit date:2000-01-07
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers.
Proc.Natl.Acad.Sci.USA, 97, 2000
1DV3
DownloadVisualize
BU of 1dv3 by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES IN THE CHARGE-SEPARATED D+QAQB-STATE WITH THE PROTON TRANSFER INHIBITOR CD2+
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CADMIUM ION, ...
Authors:Axelrod, H.L, Abresch, E.C, Paddock, M.L, Okamura, M.Y, Feher, G.
Deposit date:2000-01-19
Release date:2000-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers.
Proc.Natl.Acad.Sci.USA, 97, 2000
8D9O
DownloadVisualize
BU of 8d9o by Molmil
De Novo Photosynthetic Reaction Center Protein in Apo-State
Descriptor: CADMIUM ION, Reaction Center Maquette
Authors:Ennist, N.M, Stayrook, S.E, Dutton, P.L, Moser, C.C.
Deposit date:2022-06-10
Release date:2022-09-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Rational design of photosynthetic reaction center protein maquettes.
Front Mol Biosci, 9, 2022
8HQ8
DownloadVisualize
BU of 8hq8 by Molmil
Bry-LHCII homotrimer of Bryopsis corticulans
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, Z.H, Shen, J.R, Wang, W.D.
Deposit date:2022-12-13
Release date:2023-09-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
8HPD
DownloadVisualize
BU of 8hpd by Molmil
Bry-LHCII heterotrimer of Bryopsis corticulans
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
Authors:Li, Z.H, Shen, J.R, Wang, W.D.
Deposit date:2022-12-12
Release date:2023-09-06
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
8HLV
DownloadVisualize
BU of 8hlv by Molmil
Bry-LHCII homotrimer of Bryopsis corticulans
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, CHLOROPHYLL A, ...
Authors:Li, Z.H, Shen, J.R, Wang, W.D.
Deposit date:2022-12-01
Release date:2023-09-06
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Structural and functional properties of different types of siphonous LHCII trimers from an intertidal green alga Bryopsis corticulans.
Structure, 31, 2023
8GLT
DownloadVisualize
BU of 8glt by Molmil
Backbone model of de novo-designed chlorophyll-binding nanocage O32-15
Descriptor: C2-chlorophyll-comp_O32-15_ctermHis, polyalanine model, C3-comp_O32-15
Authors:Redler, R.L, Ennist, N.M, Wang, S, Baker, D, Ekiert, D.C, Bhabha, G.
Deposit date:2023-03-23
Release date:2024-03-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:De novo design of proteins housing excitonically coupled chlorophyll special pairs.
Nat.Chem.Biol., 20, 2024
1PST
DownloadVisualize
BU of 1pst by Molmil
CRYSTALLOGRAPHIC ANALYSES OF SITE-DIRECTED MUTANTS OF THE PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Chirino, A.J, Feher, G, Rees, D.C.
Deposit date:1993-12-13
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic analyses of site-directed mutants of the photosynthetic reaction center from Rhodobacter sphaeroides.
Biochemistry, 33, 1994
1RCF
DownloadVisualize
BU of 1rcf by Molmil
STRUCTURE OF THE TRIGONAL FORM OF RECOMBINANT OXIDIZED FLAVODOXIN FROM ANABAENA 7120 AT 1.40 ANGSTROMS RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN, SULFATE ION
Authors:Burkhart, B, Ramakrishnan, B, Yan, H, Reedstrom, R, Markley, J, Straus, N, Sundaralingam, M.
Deposit date:1994-10-31
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of the trigonal form of recombinant oxidized flavodoxin from Anabaena 7120 at 1.40 A resolution.
Acta Crystallogr.,Sect.D, 51, 1995
1PSS
DownloadVisualize
BU of 1pss by Molmil
CRYSTALLOGRAPHIC ANALYSES OF SITE-DIRECTED MUTANTS OF THE PHOTOSYNTHETIC REACTION CENTER FROM RHODOBACTER SPHAEROIDES
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Chirino, A.J, Feher, G, Rees, D.C.
Deposit date:1993-12-13
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystallographic analyses of site-directed mutants of the photosynthetic reaction center from Rhodobacter sphaeroides.
Biochemistry, 33, 1994
4DR8
DownloadVisualize
BU of 4dr8 by Molmil
Crystal structure of a peptide deformylase from Synechococcus elongatus
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FORMIC ACID, ...
Authors:Lorimer, D, Abendroth, J, Craig, T, Burgin, A, Segall, A, Rohwer, F.
Deposit date:2012-02-17
Release date:2013-03-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
4DR9
DownloadVisualize
BU of 4dr9 by Molmil
Crystal structure of a peptide deformylase from synechococcus elongatus in complex with actinonin
Descriptor: ACTINONIN, BROMIDE ION, Peptide deformylase, ...
Authors:Lorimer, D, Abendroth, J, Craig, T, Burgin, A, Segall, A, Rohwler, F.
Deposit date:2012-02-17
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
5TJF
DownloadVisualize
BU of 5tjf by Molmil
The crystal structure of Allophycocyanin from the red algae Gracilaria chilensis
Descriptor: Allophycocyanin alpha subunit, Allophycocyanin beta subunit, CHLORIDE ION, ...
Authors:Figueroa, M, Dagnino, J, Kerff, F, Chartier, P, Bunster, M, Martinez-Oyanedel, J.
Deposit date:2016-10-04
Release date:2017-05-24
Last modified:2017-06-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural models of the different trimers present in the core of phycobilisomes from Gracilaria chilensis based on crystal structures and sequences.
PLoS ONE, 12, 2017
1PCS
DownloadVisualize
BU of 1pcs by Molmil
THE 2.15 A CRYSTAL STRUCTURE OF A TRIPLE MUTANT PLASTOCYANIN FROM THE CYANOBACTERIUM SYNECHOCYSTIS SP. PCC 6803
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Romero, A, De La Cerda, B, Varela, P.F, Navarro, J.A, Hervas, M, De La Rosa, M.A.
Deposit date:1997-06-17
Release date:1997-12-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The 2.15 A crystal structure of a triple mutant plastocyanin from the cyanobacterium Synechocystis sp. PCC 6803.
J.Mol.Biol., 275, 1998
2BZ7
DownloadVisualize
BU of 2bz7 by Molmil
Oxidized and reduced structures of a mutant Plastocyanin of fern
Descriptor: COPPER (II) ION, PLASTOCYANIN
Authors:Hulsker, R, Thomassen, E.A.J, Ubbink, M.
Deposit date:2005-08-12
Release date:2006-11-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Protonation of a Histidine Copper Ligand in Fern Plastocyanin.
J.Am.Chem.Soc., 129, 2007
2CE1
DownloadVisualize
BU of 2ce1 by Molmil
Structure of reduced Arabidopsis thaliana cytochrome 6A
Descriptor: CYTOCHROME C6, HEME C
Authors:Marcaida, M.J, Schlarb-Ridley, B.G, Worrall, J.A.R, Wastl, J, Evans, T.J, Bendall, D.S, Luisi, B.F, Howe, C.J.
Deposit date:2006-02-02
Release date:2006-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Cytochrome C(6A), a Novel Dithio-Cytochrome of Arabidopsis Thaliana, and its Reactivity with Plastocyanin: Implications for Function.
J.Mol.Biol., 360, 2006
2CE0
DownloadVisualize
BU of 2ce0 by Molmil
Structure of oxidized Arabidopsis thaliana cytochrome 6A
Descriptor: CYTOCHROME C6, HEME C
Authors:Marcaida, M.J, Schlarb-Ridley, B.G, Worrall, J.A.R, Wastl, J, Evans, T.J, Bendall, D.S, Luisi, B.F, Howe, C.J.
Deposit date:2006-02-01
Release date:2006-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Structure of Cytochrome C(6A), a Novel Dithio-Cytochrome of Arabidopsis Thaliana, and its Reactivity with Plastocyanin: Implications for Function.
J.Mol.Biol., 360, 2006
8HGR
DownloadVisualize
BU of 8hgr by Molmil
The apo-flavodoxin monomer from Synechococcus elongatus PCC 7942
Descriptor: CHLORIDE ION, Flavodoxin, MAGNESIUM ION
Authors:Liu, S.W, Chen, Y.Y, Gong, Y, Cao, P.
Deposit date:2022-11-15
Release date:2022-12-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:A dimer-monomer transition captured by the crystal structures of cyanobacterial apo flavodoxin.
Biochem.Biophys.Res.Commun., 639, 2022

224201

数据于2024-08-28公开中

PDB statisticsPDBj update infoContact PDBjnumon