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3RG6
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Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco
Descriptor: RbcX protein, Ribulose bisphosphate carboxylase large chain
Authors:Bracher, A, Starling-Windhof, A, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2011-04-07
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a chaperone-bound assembly intermediate of form I Rubisco.
Nat.Struct.Mol.Biol., 18, 2011
6SMH
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BU of 6smh by Molmil
Cryo-electron microscopy structure of a RbcL-Raf1 supercomplex from Synechococcus elongatus PCC 7942
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1 (RAF1) peptide
Authors:Huang, F, Kong, W.-W, Sun, Y, Chen, T, Dykes, G.F, Jiang, Y.L, Liu, L.N.
Deposit date:2019-08-21
Release date:2020-07-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Rubisco accumulation factor 1 (Raf1) plays essential roles in mediating Rubisco assembly and carboxysome biogenesis.
Proc.Natl.Acad.Sci.USA, 117, 2020
1GK8
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BU of 1gk8 by Molmil
Rubisco from Chlamydomonas reinhardtii
Descriptor: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Taylor, T.C.
Deposit date:2001-08-09
Release date:2001-10-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:First Crystal Structure of Rubisco from a Green Alga, Chlamydomonas Reinhardtii.
J.Biol.Chem., 276, 2001
6Z1F
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BU of 6z1f by Molmil
CryoEM structure of Rubisco Activase with its substrate Rubisco from Nostoc sp. (strain PCC7120)
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wang, H, Bracher, A, Flecken, M, Popilka, L, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2020-05-13
Release date:2020-09-23
Last modified:2021-04-07
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Dual Functions of a Rubisco Activase in Metabolic Repair and Recruitment to Carboxysomes.
Cell, 183, 2020
3ZXW
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BU of 3zxw by Molmil
STRUCTURE OF ACTIVATED RUBISCO FROM THERMOSYNECHOCOCCUS ELONGATUS COMPLEXED WITH 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Terlecka, B, Wilhelmi, V, Bialek, W, Gubernator, B, Szczepaniak, A, Hofmann, E.
Deposit date:2011-08-16
Release date:2012-08-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase from Thermosynechococcus Elongatus
To be Published
6Z1G
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BU of 6z1g by Molmil
CryoEM structure of the interaction between Rubisco Activase small-subunit-like (SSUL) domain with Rubisco from Nostoc sp. (strain PCC7120)
Descriptor: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, Ribulose bisphosphate carboxylase/oxygenase activase
Authors:Wang, H, Bracher, A, Flecken, M, Popilka, L, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2020-05-13
Release date:2020-09-23
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Dual Functions of a Rubisco Activase in Metabolic Repair and Recruitment to Carboxysomes.
Cell, 183, 2020
3WQP
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BU of 3wqp by Molmil
Crystal structure of Rubisco T289D mutant from Thermococcus kodakarensis
Descriptor: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Fujihashi, M, Nishitani, Y, Kiriyama, T, Miki, K.
Deposit date:2014-01-29
Release date:2015-02-04
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutation design of thermophilic Rubisco based on the three-dimensional structure enhances its activity at ambient temperature
to be published
3RUB
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BU of 3rub by Molmil
CRYSTAL STRUCTURE OF THE UNACTIVATED FORM OF RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE FROM TOBACCO REFINED AT 2.0-ANGSTROMS RESOLUTION
Descriptor: ASPARAGINE, RIBULOSE 1,5-BISPHOSPHATE CARBOXYLASE/OXYGENASE, FORM III, ...
Authors:Schreuder, H, Cascio, D, Curmi, P.M.G, Chapman, M.S, Suh, S.W, Eisenberg, D.S.
Deposit date:1990-05-25
Release date:1992-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the unactivated form of ribulose-1,5-bisphosphate carboxylase/oxygenase from tobacco refined at 2.0-A resolution.
J.Biol.Chem., 267, 1992
6UEW
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BU of 6uew by Molmil
Rubisco / CsoS2 N-peptide complex responsible for alpha-carboxysome cargo loading
Descriptor: Ribulose bisphosphate carboxylase large chain, CsoS2 N-peptide fusion, Ribulose bisphosphate carboxylase small chain
Authors:Oltrogge, L.M, Savage, D.F.
Deposit date:2019-09-23
Release date:2019-10-30
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Multivalent interactions between CsoS2 and Rubisco mediate alpha-carboxysome formation.
Nat.Struct.Mol.Biol., 27, 2020
5C2C
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BU of 5c2c by Molmil
GWS1B RubisCO: Form II RubisCO derived from uncultivated Gallionellacea species (unliganded form)
Descriptor: CHLORIDE ION, Form II RubisCO, MAGNESIUM ION
Authors:Arbing, M.A, Varaljay, V.A, Satagopan, S, Tabita, F.R.
Deposit date:2015-06-15
Release date:2015-12-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria.
Environ.Microbiol., 18, 2016
3KDO
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BU of 3kdo by Molmil
Crystal structure of Type III Rubisco SP6 mutant complexed with 2-CABP
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2009-10-23
Release date:2010-10-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
3KDN
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BU of 3kdn by Molmil
Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
Deposit date:2009-10-23
Release date:2010-10-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile
J.Biol.Chem., 285, 2010
7ZBT
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BU of 7zbt by Molmil
Subtomogram averaging of Rubisco from native Halothiobacillus carboxysomes
Descriptor: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small subunit
Authors:Ni, T, Zhu, Y, Yu, X, Sun, Y, Liu, L, Zhang, P.
Deposit date:2022-03-24
Release date:2022-07-20
Last modified:2023-01-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
4F0H
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BU of 4f0h by Molmil
UNACTIVATED RUBISCO with OXYGEN BOUND
Descriptor: OXYGEN MOLECULE, PHOSPHATE ION, Ribulose bisphosphate carboxylase large chain, ...
Authors:Stec, B.
Deposit date:2012-05-04
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
4F0M
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BU of 4f0m by Molmil
UNACTIVATED RUBISCO with MAGNESIUM AND A WATER MOLECULE BOUND
Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Stec, B.
Deposit date:2012-05-04
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012
2CWX
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BU of 2cwx by Molmil
Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
Descriptor: Ribulose bisphosphate carboxylase
Authors:Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-27
Release date:2005-12-27
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-1 crystal)
To be Published
2D69
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BU of 2d69 by Molmil
Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)
Descriptor: Ribulose bisphosphate carboxylase, SULFATE ION
Authors:Mizohata, E, Mishima, C, Akasaka, R, Uda, H, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-11-10
Release date:2006-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the complex of sulfate ion and octameric ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Pyrococcus horikoshii OT3 (form-2 crystal)
To be Published
7VWX
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BU of 7vwx by Molmil
CryoEM structure of football-shaped GroEL:ES2 with RuBisCO
Descriptor: Chaperonin GroEL, Co-chaperonin GroES, Ribulose bisphosphate carboxylase
Authors:Kim, H, Roh, S.H.
Deposit date:2021-11-12
Release date:2022-01-12
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Cryo-EM structures of GroEL:ES 2 with RuBisCO visualize molecular contacts of encapsulated substrates in a double-cage chaperonin.
Iscience, 25, 2022
7ZC1
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BU of 7zc1 by Molmil
Subtomogram averaging of Rubisco from Cyanobium carboxysome
Descriptor: Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase, small subunit
Authors:Ni, T, Zhu, Y, Seaton-Burn, W, Zhang, P.
Deposit date:2022-03-25
Release date:2022-07-06
Last modified:2023-01-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and assembly of cargo Rubisco in two native alpha-carboxysomes.
Nat Commun, 13, 2022
6KYJ
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BU of 6kyj by Molmil
Hybrid-Rubisco (rice RbcL and sorghum RbcS) in complex with sulfate ions
Descriptor: GLYCEROL, Ribulose bisphosphate carboxylase large chain, Ribulose bisphosphate carboxylase small chain, ...
Authors:Matsumura, H, Yoshizawa, T, Tanaka, S, Yoshikawa, H.
Deposit date:2019-09-19
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hybrid Rubisco with Complete Replacement of Rice Rubisco Small Subunits by Sorghum Counterparts Confers C 4 Plant-like High Catalytic Activity.
Mol Plant, 13, 2020
1IR2
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BU of 1ir2 by Molmil
Crystal Structure of Activated Ribulose-1,5-bisphosphate Carboxylase/oxygenase (Rubisco) from Green alga, Chlamydomonas reinhardtii Complexed with 2-Carboxyarabinitol-1,5-bisphosphate (2-CABP)
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, GLYCEROL, Large subunit of Rubisco, ...
Authors:Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
Deposit date:2001-09-03
Release date:2002-03-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
7T1C
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BU of 7t1c by Molmil
Crystal structure of RUBISCO from Sulfurivirga caldicuralii
Descriptor: Ribulose-bisphosphate carboxylase
Authors:Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
Deposit date:2021-12-01
Release date:2022-09-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
7T1J
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BU of 7t1j by Molmil
Crystal structure of RUBISCO from Rhodospirillaceae bacterium BRH_c57
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
Authors:Pereira, J.H, Liu, A.K, Shih, P.M, Adams, P.D.
Deposit date:2021-12-02
Release date:2022-09-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structural plasticity enables evolution and innovation of RuBisCO assemblies.
Sci Adv, 8, 2022
1IR1
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BU of 1ir1 by Molmil
Crystal Structure of Spinach Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase (Rubisco) Complexed with CO2, Mg2+ and 2-Carboxyarabinitol-1,5-Bisphosphate
Descriptor: 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, Large subunit of Rubisco, MAGNESIUM ION, ...
Authors:Mizohata, E, Matsumura, H, Okano, Y, Kumei, M, Takuma, H, Onodera, J, Kato, K, Shibata, N, Inoue, T, Yokota, A, Kai, Y.
Deposit date:2001-08-31
Release date:2002-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of activated ribulose-1,5-bisphosphate carboxylase/oxygenase from green alga Chlamydomonas reinhardtii complexed with 2-carboxyarabinitol-1,5-bisphosphate.
J.Mol.Biol., 316, 2002
4F0K
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BU of 4f0k by Molmil
UNACTIVATED RUBISCO with MAGNESIUM AND CARBON DIOXIDE BOUND
Descriptor: CARBON DIOXIDE, CHLORIDE ION, GLYCEROL, ...
Authors:Stec, B.
Deposit date:2012-05-04
Release date:2012-11-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.
Proc.Natl.Acad.Sci.USA, 109, 2012

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数据于2024-06-12公开中

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