Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2BVM
DownloadVisualize
BU of 2bvm by Molmil
Crystal structure of the catalytic domain of toxin B from Clostridium difficile in complex with UDP, Glc and manganese ion
Descriptor: MANGANESE (II) ION, SULFATE ION, TOXIN B, ...
Authors:Reinert, D.J, Jank, T, Aktories, K, Schulz, G.E.
Deposit date:2005-06-30
Release date:2005-08-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural Basis for the Function of Clostridium Difficile Toxin B.
J.Mol.Biol., 351, 2005
2BVN
DownloadVisualize
BU of 2bvn by Molmil
E. coli EF-Tu:GDPNP in complex with the antibiotic enacyloxin IIa
Descriptor: ELONGATION FACTOR TU, ENACYLOXIN IIA, MAGNESIUM ION, ...
Authors:Parmeggiani, A, Krab, I.M, Watanabe, T, Nielsen, R.C, Dahlberg, C, Nyborg, J, Nissen, P.
Deposit date:2005-06-30
Release date:2005-09-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enacyloxin Iia Pinpoints a Binding Pocket of Elongation Factor TU for Development of Novel Antibiotics.
J.Biol.Chem., 281, 2006
2BVO
DownloadVisualize
BU of 2bvo by Molmil
Structures of Three HIV-1 HLA-B5703-Peptide Complexes and Identification of Related HLAs Potentially Associated with Long-Term Non-Progression
Descriptor: BETA-2-MICROGLOBULIN, GAG PROTEIN, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Stewart-Jones, G.B, Gillespie, G, Overton, I.M, Kaul, R, Roche, P, Mcmichael, A.J, Rowland-Jones, S, Jones, E.Y.
Deposit date:2005-07-01
Release date:2005-09-13
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of three HIV-1 HLA-B*5703-peptide complexes and identification of related HLAs potentially associated with long-term nonprogression.
J Immunol., 175, 2005
2BVP
DownloadVisualize
BU of 2bvp by Molmil
Structures of Three HIV-1 HLA-B5703-Peptide Complexes and Identification of Related HLAs Potentially Associated with Long-Term Non-Progression
Descriptor: BETA-2-MICROGLOBULIN, HIV-P24, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Stewart-Jones, G.B, Gillespie, G, Overton, I.M, Kaul, R, Roche, P, Mcmichael, A.J, Rowland-Jones, S, Jones, E.Y.
Deposit date:2005-07-01
Release date:2005-09-07
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of three HIV-1 HLA-B*5703-peptide complexes and identification of related HLAs potentially associated with long-term nonprogression.
J Immunol., 175, 2005
2BVQ
DownloadVisualize
BU of 2bvq by Molmil
Structures of Three HIV-1 HLA-B5703-Peptide Complexes and Identification of Related HLAs Potentially Associated with Long-Term Non-Progression
Descriptor: BETA-2-MICROGLOBULIN, HIV-P24, HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ...
Authors:Stewart-Jones, G.B, Gillespie, G, Overton, I.M, Kaul, R, Roche, P, Mcmichael, A.J, Rowland-Jones, S, Jones, E.Y.
Deposit date:2005-07-01
Release date:2005-09-07
Last modified:2019-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of three HIV-1 HLA-B*5703-peptide complexes and identification of related HLAs potentially associated with long-term nonprogression.
J Immunol., 175, 2005
2BVR
DownloadVisualize
BU of 2bvr by Molmil
Human thrombin complexed with fragment-based small molecules occupying the S1 pocket
Descriptor: 2-[2-(4-CHLORO-PHENYLSULFANYL)-ACETYLAMINO]-3-(4-GUANIDINO-PHENYL)-PROPIONAMIDE, ALPHA THROMBIN, HIRUDIN VARIANT-2
Authors:Neumann, T, Junker, H.-D, Keil, O, Burkert, K, Ottleben, H, Gamer, J, Sekul, R, Deppe, H, Feurer, A, Tomandl, D, Metz, G.
Deposit date:2005-07-04
Release date:2006-10-25
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Discovery of Thrombin Inhibitor Fragments from Chemical Microarray Screening
Lett.Drug Des.Discovery, 2, 2005
2BVS
DownloadVisualize
BU of 2bvs by Molmil
Human thrombin complexed with fragment-based small molecules occupying the S1 pocket
Descriptor: ALPHA THROMBIN, HIRUDIN VARIANT-2, N-[2-(2-CARBAMOYLMETHOXY-ETHOXY)-ETHYL]-2-[2-(4-CHLORO-PHENYLSULFANYL)-ACETYLAMINO]-3-(4-GUANIDINO-PHENYL)-PROPIONAMIDE
Authors:Neumann, T, Junker, H.-D, Keil, O, Burkert, K, Ottleben, H, Gamer, J, Sekul, R, Deppe, H, Feurer, A, Tomandl, D, Metz, G.
Deposit date:2005-07-04
Release date:2006-10-25
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Discovery of Thrombin Inhibitor Fragments from Chemical Microarray Screening
Lett.Drug Des.Discovery, 2, 2005
2BVT
DownloadVisualize
BU of 2bvt by Molmil
The structure of a modular endo-beta-1,4-mannanase from Cellulomonas fimi explains the product specificity of glycoside hydrolase family 26 mannanases.
Descriptor: BETA-1,4-MANNANASE, CACODYLATE ION, beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-beta-D-mannopyranose
Authors:Le Nours, J, Anderson, L, Stoll, D, Stalbrand, H, Lo Leggio, L.
Deposit date:2005-07-04
Release date:2005-09-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The Structure and Characterization of a Modular Endo-Beta-1,4-Mannanase from Cellulomonas Fimi
Biochemistry, 44, 2005
2BVU
DownloadVisualize
BU of 2bvu by Molmil
D83R mutant of Asaris suum major sperm protein (MSP)
Descriptor: MAJOR SPERM PROTEIN, ISOFORM ALPHA
Authors:Stewart, M, Grant, R.P, Roberts, T.M.
Deposit date:2005-07-04
Release date:2006-10-25
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Role of Filament-Packing Dynamics in Powering Amoeboid Cell Motility.
Proc.Natl.Acad.Sci.USA, 105, 2008
2BVV
DownloadVisualize
BU of 2bvv by Molmil
SUGAR RING DISTORTION IN THE GLYCOSYL-ENZYME INTERMEDIATE OF A FAMILY G/11 XYLANASE.
Descriptor: PROTEIN (ENDO-1,4-BETA-XYLANASE)
Authors:Sidhu, G, Brayer, G.D.
Deposit date:1998-11-17
Release date:1999-06-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Sugar ring distortion in the glycosyl-enzyme intermediate of a family G/11 xylanase.
Biochemistry, 38, 1999
2BVW
DownloadVisualize
BU of 2bvw by Molmil
CELLOBIOHYDROLASE II (CEL6A) FROM HUMICOLA INSOLENS IN COMPLEX WITH GLUCOSE AND CELLOTETRAOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLOBIOHYDROLASE II, GLYCEROL, ...
Authors:Varrot, A, Davies, G.J, Schulein, M.
Deposit date:1999-02-18
Release date:2000-02-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural changes of the active site tunnel of Humicola insolens cellobiohydrolase, Cel6A, upon oligosaccharide binding.
Biochemistry, 38, 1999
2BVX
DownloadVisualize
BU of 2bvx by Molmil
Design and Discovery of Novel, Potent Thrombin Inhibitors with a Solubilizing Cationic P1-P2-Linker
Descriptor: ALPHA THROMBIN, HIRUDIN VARIANT-2, N-(5-CHLORO-BENZO[B]THIOPHEN-3-YLMETHYL)-2-[6-CHLORO-OXO-3-(2-PYRIDIN-2-YL-ETHYLAMINO)-2H-PYRAZIN-1-YL]-ACETAMIDE
Authors:Bulat, S, Bosio, S, Grabowski, E, Papadopoulos, M.A, Cerezo-Galvez, S, Rosenbaum, C, Matassa, V.G, Ott, I, Metz, G, Schamberger, J, Sekul, R, Feurer, A.
Deposit date:2005-07-04
Release date:2006-10-25
Last modified:2016-12-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Design and Discovery of Novel, Potent Pyrazinone-Based Thrombin Inhibitors with a Solubilizing P1-P2-Linker
Lett.Drug Des.Discovery, 3, 2006
2BVY
DownloadVisualize
BU of 2bvy by Molmil
The structure and characterization of a modular endo-beta-1,4-mannanase from Cellulomonas fimi
Descriptor: ACETATE ION, BETA-1,4-MANNANASE, CACODYLATE ION, ...
Authors:Le Nours, J, Anderson, L, Stoll, D, Stalbrand, H, Lo Leggio, L.
Deposit date:2005-07-04
Release date:2005-09-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Structure and Characterization of a Modular Endo-Beta-1,4-Mannanase from Cellulomonas Fimi
Biochemistry, 44, 2005
2BVZ
DownloadVisualize
BU of 2bvz by Molmil
Mutant of the Ribosomal Protein S6
Descriptor: 30S RIBOSOMAL PROTEIN S6
Authors:Otzen, D.E.
Deposit date:2005-07-05
Release date:2005-10-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Antagonism, Non-Native Interactions and Non-Two-State Folding in S6 Revealed by Double-Mutant Cycle Analysis.
Protein Eng.Des.Sel., 18, 2005
2BW0
DownloadVisualize
BU of 2bw0 by Molmil
Crystal Structure of the hydrolase domain of Human 10-Formyltetrahydrofolate 2 dehydrogenase
Descriptor: 10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE, SULFATE ION
Authors:Ogg, D.J, Stenmark, P, Arrowsmith, C, Edwards, A, Ehn, M, Graslund, S, Hammarstrom, M, Hallberg, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Persson, C, Sagemark, J, Schuler, H, Sundstrom, M, Thorsell, A, Dobritzsch, D, Weigelt, J.
Deposit date:2005-07-07
Release date:2005-07-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of the Hydrolase Domain of Human 10-Formyltetrahydrofolate Dehydrogenase and its Complex with a Substrate Analogue.
Acta Crystallogr.,Sect.D, 62, 2006
2BW1
DownloadVisualize
BU of 2bw1 by Molmil
Iron-bound crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, DPS-LIKE PEROXIDE RESISTANCE PROTEIN, ...
Authors:Kauko, A, Pulliainen, A, Haataja, S, Finne, J, Papageorgiou, A.C.
Deposit date:2005-07-07
Release date:2006-09-27
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Iron incorporation in Streptococcus suis Dps-like peroxide resistance protein Dpr requires mobility in the ferroxidase center and leads to the formation of a ferrihydrite-like core.
J. Mol. Biol., 364, 2006
2BW2
DownloadVisualize
BU of 2bw2 by Molmil
BofC from Bacillus subtilis
Descriptor: BYPASS OF FORESPORE C
Authors:Patterson, H.M, Brannigan, J.A, Cutting, S.M, Wilson, K.S, Wilkinson, A.J, Ab, E, Diercks, T, Folkers, G.E, de Jong, R.N, Truffault, V, Kaptein, R.
Deposit date:2005-07-08
Release date:2005-09-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of bypass of forespore C, an intercompartmental signaling factor during sporulation in Bacillus.
J. Biol. Chem., 280, 2005
2BW3
DownloadVisualize
BU of 2bw3 by Molmil
Three-dimensional structure of the Hermes DNA transposase
Descriptor: TRANSPOSASE
Authors:Hickman, A.B, Perez, Z.N, Zhou, L, Musingarimi, P, Ghirlando, R, Hinshaw, J.E, Craig, N.L, Dyda, F.
Deposit date:2005-07-11
Release date:2005-07-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular Architecture of a Eukaryotic DNA Transposase
Nat.Struct.Mol.Biol., 12, 2005
2BW4
DownloadVisualize
BU of 2bw4 by Molmil
Atomic Resolution Structure of Resting State of the Achromobacter cycloclastes Cu Nitrite Reductase
Descriptor: ACETATE ION, COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, ...
Authors:Antonyuk, S.V, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2005-07-12
Release date:2005-08-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Atomic Resolution Structures of Resting-State, Substrate- and Product-Complexed Cu-Nitrite Reductase Provide Insight Into Catalytic Mechanism
Proc.Natl.Acad.Sci.USA, 102, 2005
2BW5
DownloadVisualize
BU of 2bw5 by Molmil
Atomic Resolution Structure of NO-bound Achromobacter cycloclastes Cu Nitrite Reductase
Descriptor: ACETATE ION, COPPER (II) ION, COPPER-CONTAINING NITRITE REDUCTASE, ...
Authors:Antonyuk, S.V, Strange, R.W, Sawers, G, Eady, R.R, Hasnain, S.S.
Deposit date:2005-07-12
Release date:2005-08-17
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Atomic Resolution Structures of Resting-State, Substrate- and Product-Complexed Cu-Nitrite Reductase Provide Insight Into Catalytic Mechanism
Proc.Natl.Acad.Sci.USA, 102, 2005
2BW7
DownloadVisualize
BU of 2bw7 by Molmil
A novel mechanism for adenylyl cyclase inhibition from the crystal structure of its complex with catechol estrogen
Descriptor: 2,3,17BETA-TRIHYDROXY-1,3,5(10)-ESTRATRIENE, ADENYLATE CYCLASE, CALCIUM ION, ...
Authors:Steegborn, C, Litvin, T.N, Hess, K.C, Capper, A.B, Taussig, R, Buck, J, Levin, L.R, Wu, H.
Deposit date:2005-07-12
Release date:2005-07-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Novel Mechanism for Adenylyl Cyclase Inhibition from the Crystal Structure of its Complex with Catechol Estrogen
J.Biol.Chem., 280, 2005
2BW8
DownloadVisualize
BU of 2bw8 by Molmil
Native structure of Endoglucanase 12A (Cel12A) from Rhodothermus marinus
Descriptor: ENDOGLUCANASE, SULFATE ION
Authors:Crennell, S.J, Nordberg-Karlsson, E.
Deposit date:2005-07-13
Release date:2005-12-21
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Dimerisation and an increase in active site aromatic groups as adaptations to high temperatures: X-ray solution scattering and substrate-bound crystal structures of Rhodothermus marinus endoglucanase Cel12A.
J. Mol. Biol., 356, 2006
2BW9
DownloadVisualize
BU of 2bw9 by Molmil
Laue Structure of L29W MbCO
Descriptor: CARBON MONOXIDE, MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Schmidt, M, Nienhaus, K, Pahl, R, Krasselt, A, Anderson, S, Parak, F, Nienhaus, G.U, Srajer, V.
Deposit date:2005-07-13
Release date:2005-07-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Ligand Migration Pathway and Protein Dynamics in Myoglobin: A Time-Resolved Crystallographic Study on L29W Mbco.
Proc.Natl.Acad.Sci.USA, 102, 2005
2BWA
DownloadVisualize
BU of 2bwa by Molmil
Structure of Endoglucanase 12A (Cel12A) from Rhodothermus marinus in complex with cellopentaose, 20 minute soak.
Descriptor: ENDOGLUCANASE, GLYCEROL, SULFATE ION, ...
Authors:Crennell, S.J, Nordberg-Karlsson, E.
Deposit date:2005-07-13
Release date:2005-12-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Dimerisation and an increase in active site aromatic groups as adaptations to high temperatures: X-ray solution scattering and substrate-bound crystal structures of Rhodothermus marinus endoglucanase Cel12A.
J. Mol. Biol., 356, 2006
2BWB
DownloadVisualize
BU of 2bwb by Molmil
Crystal structure of the UBA domain of Dsk2 from S. cerevisiae
Descriptor: UBIQUITIN-LIKE PROTEIN DSK2
Authors:Lowe, E.D, Hasan, N, Trempe, J.-F, Fonso, L, Noble, M.E.M, Endicott, J.A, Johnson, L.N, Brown, N.R.
Deposit date:2005-07-13
Release date:2006-01-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of the Dsk2 Ubl and Uba Domains and Their Complex.
Acta Crystallogr.,Sect.D, 62, 2006

224572

数据于2024-09-04公开中

PDB statisticsPDBj update infoContact PDBjnumon