Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PHO
DownloadVisualize
BU of 8pho by Molmil
Portal from the Borrelia bacteriophage BB1 procapsid
Descriptor: Phage portal protein
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-06-20
Release date:2023-07-12
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHS
DownloadVisualize
BU of 8phs by Molmil
Bottom cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
Descriptor: Decorator protein P03, Decorator protein P04, Decorator protein P05, ...
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-06-20
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHR
DownloadVisualize
BU of 8phr by Molmil
Middle part of the Borrelia bacteriophage BB1 procapsid, tenfold-symmetrized outer shell
Descriptor: Decorator protein P03, Decorator protein P05, Major capsid protein, ...
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-06-20
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHQ
DownloadVisualize
BU of 8phq by Molmil
Top cap of the Borrelia bacteriophage BB1 procapsid, fivefold-symmetrized outer shell
Descriptor: Decorator protein P03, Decorator protein P05, Major capsid protein, ...
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-06-20
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHU
DownloadVisualize
BU of 8phu by Molmil
Asymmetric structure of the portal-containing cap of the Borrelia bacteriophage BB1 procapsid
Descriptor: Decorator protein P03, Decorator protein P04, Decorator protein P05, ...
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-06-20
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (7.41 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PHP
DownloadVisualize
BU of 8php by Molmil
Portal from the Borrelia bacteriophage BB1 procapsid with bound scaffold protein
Descriptor: Phage portal protein, Scaffold protein
Authors:Rumnieks, J, Fuzik, T, Tars, K.
Deposit date:2023-06-20
Release date:2023-07-19
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
7A4P
DownloadVisualize
BU of 7a4p by Molmil
Structure of small high-light grown Chlorella ohadii photosystem I
Descriptor: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, (3R)-beta,beta-caroten-3-ol, ...
Authors:Caspy, I, Nelson, N, Nechushtai, R, Shkolnisky, Y, Neumann, E.
Deposit date:2020-08-20
Release date:2021-07-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM photosystem I structure reveals adaptation mechanisms to extreme high light in Chlorella ohadii.
Nat.Plants, 7, 2021
6ZZY
DownloadVisualize
BU of 6zzy by Molmil
Structure of high-light grown Chlorella ohadii photosystem I
Descriptor: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid, ...
Authors:Caspy, I, Nelson, N, Nechushtai, R, Shkolnisky, Y, Neumann, E.
Deposit date:2020-08-05
Release date:2021-07-28
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Cryo-EM photosystem I structure reveals adaptation mechanisms to extreme high light in Chlorella ohadii.
Nat.Plants, 7, 2021
7QDV
DownloadVisualize
BU of 7qdv by Molmil
Crystal structure of outer surface protein BBA14 (OrfD) from Borrelia burgdorferi
Descriptor: BBA14 (OrfD)
Authors:Brangulis, K.
Deposit date:2021-11-30
Release date:2022-03-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of the Outer Membrane Lipoprotein BBA14 (OrfD) and the Corresponding Paralogous Gene Family 143 (PFam143) from Borrelia burgdorferi.
Pathogens, 11, 2022
480D
DownloadVisualize
BU of 480d by Molmil
CRYSTAL STRUCTURE OF THE SARCIN/RICIN DOMAIN FROM E. COLI 23 S RRNA
Descriptor: SARCIN/RICIN DOMAIN FROM 23 S RRNA
Authors:Correll, C.C, Wool, I.G, Munishkin, A.
Deposit date:1999-07-20
Release date:1999-10-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The two faces of the Escherichia coli 23 S rRNA sarcin/ricin domain: the structure at 1.11 A resolution.
J.Mol.Biol., 292, 1999
2GA0
DownloadVisualize
BU of 2ga0 by Molmil
Variable Small Protein 1 of Borrelia turicatae (VspA or Vsp1)
Descriptor: NICKEL (II) ION, surface protein VspA
Authors:Lawson, C.L, Yung, B.H, Barbour, A.G, Zuckert, W.R.
Deposit date:2006-03-07
Release date:2006-06-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of neurotropism-associated variable surface protein 1 (Vsp1) of Borrelia turicatae.
J.Bacteriol., 188, 2006
6YF5
DownloadVisualize
BU of 6yf5 by Molmil
Lamin A 17-70 coil1A dimer stabilized by C-terminal capping
Descriptor: Prelamin-A/C,Microtubule-associated protein RP/EB family member 1
Authors:Lilina, A.V, Stalmans, G, Strelkov, S.V.
Deposit date:2020-03-26
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Addressing the Molecular Mechanism of Longitudinal Lamin Assembly Using Chimeric Fusions.
Cells, 9, 2020
6YSH
DownloadVisualize
BU of 6ysh by Molmil
Lamin A 1-70 coil1A dimer stabilized by C-terminal capping
Descriptor: Prelamin-A/C,Microtubule-associated protein RP/EB family member 1
Authors:Stalmans, G, Lilina, A.V, Strelkov, S.V.
Deposit date:2020-04-22
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Addressing the Molecular Mechanism of Longitudinal Lamin Assembly Using Chimeric Fusions.
Cells, 9, 2020
3OON
DownloadVisualize
BU of 3oon by Molmil
The structure of an outer membrance protein from Borrelia burgdorferi B31
Descriptor: Outer membrane protein (Tpn50), SULFATE ION
Authors:Fan, Y, Bigelow, L, Feldman, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-31
Release date:2010-09-22
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Insights into PG-binding, conformational change, and dimerization of the OmpA C-terminal domains from Salmonella enterica serovar Typhimurium and Borrelia burgdorferi.
Protein Sci., 26, 2017
6ZZX
DownloadVisualize
BU of 6zzx by Molmil
Structure of low-light grown Chlorella ohadii Photosystem I
Descriptor: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, (3R)-beta,beta-caroten-3-ol, ...
Authors:Caspy, I, Nelson, N, Nechushtai, R, Neumann, E, Shkolnisky, Y.
Deposit date:2020-08-05
Release date:2021-07-28
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM photosystem I structure reveals adaptation mechanisms to extreme high light in Chlorella ohadii.
Nat.Plants, 7, 2021
1YJG
DownloadVisualize
BU of 1yjg by Molmil
Variable Small Protein 1 of Borrelia turicatae (VspA or Vsp1)
Descriptor: Surface protein VspA
Authors:Zueckert, W.R, Yung, B.H, Barbour, A.G, Lawson, C.L.
Deposit date:2005-01-14
Release date:2006-01-24
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of neurotropism-associated variable surface protein 1 (Vsp1) of Borrelia turicatae.
J.Bacteriol., 188, 2006
6M7W
DownloadVisualize
BU of 6m7w by Molmil
Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins
Descriptor: Phosphorelay intermediate protein YPD1
Authors:Menon, S.K, Soni, K.S, West, A.H.
Deposit date:2018-08-21
Release date:2019-02-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins.
BMC Biochem., 20, 2019
4H69
DownloadVisualize
BU of 4h69 by Molmil
Crystal Structure of the Allene Oxide Cyclase 2 from Physcomitrella patens complexed with substrate analog
Descriptor: (9Z)-11-{(2R,3S)-3-[(2Z)-pent-2-en-1-yl]oxiran-2-yl}undec-9-enoic acid, Allene oxide cyclase, ISOPROPYL ALCOHOL, ...
Authors:Neumann, P, Ficner, R.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Physcomitrella patens AOC1 and AOC2: Insights into the Enzyme Mechanism and Differences in Substrate Specificity.
Plant Physiol., 160, 2012
4H6C
DownloadVisualize
BU of 4h6c by Molmil
Crystal Structure of the Allene Oxide Cyclase 1 from Physcomitrella patens
Descriptor: Allene oxide cyclase, HEXANE-1,6-DIOL, PHOSPHATE ION
Authors:Neumann, P, Ficner, R.
Deposit date:2012-09-19
Release date:2012-10-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal Structures of Physcomitrella patens AOC1 and AOC2: Insights into the Enzyme Mechanism and Differences in Substrate Specificity.
Plant Physiol., 160, 2012
1AVY
DownloadVisualize
BU of 1avy by Molmil
FIBRITIN DELETION MUTANT M (BACTERIOPHAGE T4)
Descriptor: FIBRITIN
Authors:Strelkov, S.V, Tao, Y, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:1997-09-22
Release date:1997-12-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of bacteriophage T4 fibritin M: a troublesome packing arrangement.
Acta Crystallogr.,Sect.D, 54, 1998
1EAT
DownloadVisualize
BU of 1eat by Molmil
NONPEPTIDIC INHIBITORS OF HUMAN LEUKOCYTE ELASTASE. 5. DESIGN, SYNTHESIS, AND X-RAY CRYSTALLOGRAPHY OF A SERIES OF ORALLY ACTIVE 5-AMINO-PYRIMIDIN-6-ONE-CONTAINING TRIFLUOROMETHYLKETONES
Descriptor: 2-[5-METHANESULFONYLAMINO-2-(4-AMINOPHENYL)-6-OXO-1,6-DIHYDRO-1-PYRIMIDINYL]-N-(3,3,3-TRIFLUORO-1-ISOPROPYL-2-OXOPROPYL)ACETAMIDE, PORCINE PANCREATIC ELASTASE, SODIUM ION, ...
Authors:Ceccarelli, C.
Deposit date:1994-11-22
Release date:1995-02-07
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nonpeptidic inhibitors of human leukocyte elastase. 5. Design, synthesis, and X-ray crystallography of a series of orally active 5-aminopyrimidin-6-one-containing trifluoromethyl ketones.
J.Med.Chem., 38, 1995
2FQA
DownloadVisualize
BU of 2fqa by Molmil
Violacin A
Descriptor: violacin 1
Authors:Ireland, D.C, Craik, D.J, Daly, N.L.
Deposit date:2006-01-17
Release date:2006-01-31
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Discovery and Characterization of a Linear Cyclotide from Viola odorata: Implications for the Processing of Circular Proteins
J.Mol.Biol., 357, 2006
7RPS
DownloadVisualize
BU of 7rps by Molmil
B. miyamotoi FbpB complement inhibitory domain
Descriptor: Fibronectin-binding lipoprotein FbpB
Authors:Booth, C.E, Garcia, B.L.
Deposit date:2021-08-04
Release date:2022-04-27
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Borrelia miyamotoi FbpA and FbpB Are Immunomodulatory Outer Surface Lipoproteins With Distinct Structures and Functions.
Front Immunol, 13, 2022
6EO5
DownloadVisualize
BU of 6eo5 by Molmil
Physcomitrella patens BBE-like 1 variant D396N
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PpBBE-like 1 D396N
Authors:Toplak, M, Winkler, A, Macheroux, P.
Deposit date:2017-10-09
Release date:2018-04-18
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The single berberine bridge enzyme homolog of Physcomitrella patens is a cellobiose oxidase.
FEBS J., 285, 2018
6EO4
DownloadVisualize
BU of 6eo4 by Molmil
Physcomitrella patens BBE-like 1 wild-type
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, PpBBE-like 1
Authors:Toplak, M, Winkler, A, Macheroux, P.
Deposit date:2017-10-09
Release date:2018-04-18
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The single berberine bridge enzyme homolog of Physcomitrella patens is a cellobiose oxidase.
FEBS J., 285, 2018

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon