2DIK
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![BU of 2dik by Molmil](/molmil-images/mine/2dik) | R337A MUTANT OF PYRUVATE PHOSPHATE DIKINASE | Descriptor: | PROTEIN (PYRUVATE PHOSPHATE DIKINASE), SULFATE ION | Authors: | Huang, K, Herzberg, O. | Deposit date: | 1998-09-03 | Release date: | 1999-09-13 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Location of the phosphate binding site within Clostridium symbiosum pyruvate phosphate dikinase. Biochemistry, 37, 1998
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8A8E
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![BU of 8a8e by Molmil](/molmil-images/mine/8a8e) | PPSA C terminal octahedral structure | Descriptor: | Phosphoenolpyruvate synthase | Authors: | Song, W. | Deposit date: | 2022-06-22 | Release date: | 2023-07-05 | Last modified: | 2024-07-24 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Survival strategies in the heat Lysine acetylation stabilizes the quaternary structure of a Mega-Dalton hyperthermophilic PEP-synthase To Be Published
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5LU4
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![BU of 5lu4 by Molmil](/molmil-images/mine/5lu4) | C4-type pyruvate phosphate dikinase: conformational intermediate of central domain in the swiveling mechanism | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PYRUVIC ACID, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-09-08 | Release date: | 2017-05-24 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Trapped intermediate state of plant pyruvate phosphate dikinase indicates substeps in catalytic swiveling domain mechanism. Protein Sci., 26, 2017
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2X0S
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![BU of 2x0s by Molmil](/molmil-images/mine/2x0s) | |
1DIK
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![BU of 1dik by Molmil](/molmil-images/mine/1dik) | PYRUVATE PHOSPHATE DIKINASE | Descriptor: | PYRUVATE PHOSPHATE DIKINASE, SULFATE ION | Authors: | Herzberg, O, Chen, C.C.H. | Deposit date: | 1995-12-06 | Release date: | 1996-04-03 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Swiveling-domain mechanism for enzymatic phosphotransfer between remote reaction sites. Proc.Natl.Acad.Sci.USA, 93, 1996
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1KC7
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![BU of 1kc7 by Molmil](/molmil-images/mine/1kc7) | Pyruvate Phosphate Dikinase with Bound Mg-phosphonopyruvate | Descriptor: | MAGNESIUM ION, PHOSPHONOPYRUVATE, SULFATE ION, ... | Authors: | Chen, C.C, Howard, A, Herzberg, O. | Deposit date: | 2001-11-07 | Release date: | 2002-01-30 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis Biochemistry, 41, 2002
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5FBT
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![BU of 5fbt by Molmil](/molmil-images/mine/5fbt) | Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin | Descriptor: | CHLORIDE ION, Phosphoenolpyruvate synthase, Rifampin | Authors: | Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) | Deposit date: | 2015-12-14 | Release date: | 2015-12-30 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.702 Å) | Cite: | Rifampin phosphotransferase is an unusual antibiotic resistance kinase. Nat Commun, 7, 2016
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5FBU
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![BU of 5fbu by Molmil](/molmil-images/mine/5fbu) | Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Phosphoenolpyruvate synthase, ... | Authors: | Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) | Deposit date: | 2015-12-14 | Release date: | 2015-12-30 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Rifampin phosphotransferase is an unusual antibiotic resistance kinase. Nat Commun, 7, 2016
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1VBG
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![BU of 1vbg by Molmil](/molmil-images/mine/1vbg) | Pyruvate Phosphate Dikinase from Maize | Descriptor: | MAGNESIUM ION, SULFATE ION, pyruvate,orthophosphate dikinase | Authors: | Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-26 | Release date: | 2005-03-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion Biochemistry, 44, 2005
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2OLS
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1VBH
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![BU of 1vbh by Molmil](/molmil-images/mine/1vbh) | Pyruvate Phosphate Dikinase with bound Mg-PEP from Maize | Descriptor: | MAGNESIUM ION, PHOSPHOENOLPYRUVATE, SULFATE ION, ... | Authors: | Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-26 | Release date: | 2005-03-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion Biochemistry, 44, 2005
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1KBL
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![BU of 1kbl by Molmil](/molmil-images/mine/1kbl) | PYRUVATE PHOSPHATE DIKINASE | Descriptor: | AMMONIUM ION, PYRUVATE PHOSPHATE DIKINASE, SULFATE ION | Authors: | Herzberg, O, Chen, C.C, Liu, S. | Deposit date: | 2001-11-06 | Release date: | 2002-01-30 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis Biochemistry, 41, 2002
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2R82
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![BU of 2r82 by Molmil](/molmil-images/mine/2r82) | Pyruvate phosphate dikinase (PPDK) triple mutant R219E/E271R/S262D adapts a second conformational state | Descriptor: | Pyruvate, phosphate dikinase, SULFATE ION | Authors: | Lim, K, Read, R.J, Chen, C.C, Herzberg, O. | Deposit date: | 2007-09-10 | Release date: | 2008-01-01 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | Swiveling domain mechanism in pyruvate phosphate dikinase. Biochemistry, 46, 2007
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1GGO
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![BU of 1ggo by Molmil](/molmil-images/mine/1ggo) | T453A MUTANT OF PYRUVATE, PHOSPHATE DIKINASE | Descriptor: | PROTEIN (PYRUVATE, PHOSPHATE DIKINASE), SULFATE ION | Authors: | Li, Z, Herzberg, O. | Deposit date: | 2000-08-29 | Release date: | 2001-01-10 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Identification of domain-domain docking sites within Clostridium symbiosum pyruvate phosphate dikinase by amino acid replacement. J.Biol.Chem., 275, 2000
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1JDE
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![BU of 1jde by Molmil](/molmil-images/mine/1jde) | K22A mutant of pyruvate, phosphate dikinase | Descriptor: | PYRUVATE, PHOSPHATE DIKINASE, SULFATE ION | Authors: | Ye, D, Wei, M, McGuire, M, Huang, K, Kapadia, G, Herzberg, O, Martin, B.M, Dunaway-Mariano, D. | Deposit date: | 2001-06-13 | Release date: | 2001-11-28 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Investigation of the catalytic site within the ATP-grasp domain of Clostridium symbiosum pyruvate phosphate dikinase. J.Biol.Chem., 276, 2001
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5JVJ
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![BU of 5jvj by Molmil](/molmil-images/mine/5jvj) | C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer | Descriptor: | MAGNESIUM ION, PHOSPHOENOLPYRUVATE, Pyruvate, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-05-11 | Release date: | 2017-04-05 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.898 Å) | Cite: | Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase. Sci Rep, 7, 2017
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5JVN
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![BU of 5jvn by Molmil](/molmil-images/mine/5jvn) | C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism | Descriptor: | 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-05-11 | Release date: | 2017-04-05 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase. Sci Rep, 7, 2017
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5JVL
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![BU of 5jvl by Molmil](/molmil-images/mine/5jvl) | C4-type pyruvate phospate dikinase: nucleotide binding domain with bound ATP analogue | Descriptor: | 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-05-11 | Release date: | 2017-04-05 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase. Sci Rep, 7, 2017
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