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PDB: 43 results

7N02
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BU of 7n02 by Molmil
X-ray crystallographic structure model of Lactococcus lactis prolidase mutant D36S
Descriptor: Aminopeptidase P family protein, MANGANESE (II) ION
Authors:Xu, S, Grochulski, P, Tanaka, T.
Deposit date:2021-05-24
Release date:2021-06-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystallographic structure of recombinant Lactococcus lactis prolidase to support proposed structure-function relationships.
Biochim Biophys Acta Proteins Proteom, 1865, 2017
1WN1
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BU of 1wn1 by Molmil
Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
Descriptor: COBALT (II) ION, dipeptidase
Authors:Jeyakanthan, J, Taka, J, Kitaguchi, Y, Shiro, Y, Yokoyama, S, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-26
Release date:2005-08-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Dipeptiase from Pyrococcus Horikoshii OT3
To be Published
6YO9
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BU of 6yo9 by Molmil
Product bound structure of the Ectoine utilization protein EutD (DoeA) from Halomonas elongata
Descriptor: (2~{R})-4-azanyl-2-[[(1~{S})-1-oxidanylethyl]amino]butanoic acid, Ectoine hydrolase DoeA, GLYCEROL
Authors:Mais, C.-N, Altegoer, F, Bange, G.
Deposit date:2020-04-14
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Degradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase-deacetylase complex.
J.Biol.Chem., 295, 2020
4EGE
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BU of 4ege by Molmil
Crystal Structure of Dipeptidase PepE from Mycobacterium ulcerans
Descriptor: 1,2-ETHANEDIOL, Dipeptidase PepE, UNKNOWN ATOM OR ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-03-30
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
4FKC
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BU of 4fkc by Molmil
Recombinant prolidase from Thermococcus sibiricus
Descriptor: CADMIUM ION, Xaa-Pro aminopeptidase
Authors:Trofimov, A.A, Slutskaya, E.S, Polyakov, K.M, Dorovatovskii, P.V, Gumerov, V.M, Popov, V.O.
Deposit date:2012-06-13
Release date:2012-11-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Influence of intermolecular contacts on the structure of recombinant prolidase from Thermococcus sibiricus.
Acta Crystallogr.,Sect.F, 68, 2012
4R60
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BU of 4r60 by Molmil
Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase, ...
Authors:Kumar, A, Ghosh, B, Are, V.N, Jamdar, S.N, Makde, R.D, Sharma, S.M.
Deposit date:2014-08-22
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris
to be published
4RGZ
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BU of 4rgz by Molmil
Crystal structure of recombinant prolidase from Thermococcus sibiricus at P21221 spacegroup
Descriptor: PHOSPHATE ION, Xaa-Pro aminopeptidase, ZINC ION
Authors:Timofeev, V.I, Korgenevsky, D.A, Gorbacheva, M.A, Boyko, K.M, Slutsky, E, Rakitina, T.V, Lipkin, A.V, Popov, V.O.
Deposit date:2014-10-01
Release date:2015-08-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of recombinant prolidase from Thermococcus sibiricus in space group P21221.
Acta Crystallogr.,Sect.F, 71, 2015
5FCF
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BU of 5fcf by Molmil
Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris, phosphate and Mn bound
Descriptor: DI(HYDROXYETHYL)ETHER, GLY-GLY-GLY, GLYCEROL, ...
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
Deposit date:2015-12-15
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and biochemical investigations reveal novel mode of substrate selectivity and illuminate substrate inhibition and allostericity in a subfamily of Xaa-Pro dipeptidases.
Biochim. Biophys. Acta, 1865, 2017
5FCH
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BU of 5fch by Molmil
Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris, phosphate and Zn bound
Descriptor: DI(HYDROXYETHYL)ETHER, GLY-GLY-GLY, GLYCEROL, ...
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
Deposit date:2015-12-15
Release date:2016-12-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure and biochemical investigations reveal novel mode of substrate selectivity and illuminate substrate inhibition and allostericity in a subfamily of Xaa-Pro dipeptidases
Biochim. Biophys. Acta, 1865, 2017
5GIQ
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BU of 5giq by Molmil
Xaa-Pro peptidase from Deinococcus radiodurans, Zinc bound
Descriptor: PHOSPHATE ION, Proline dipeptidase, ZINC ION
Authors:Are, V.N, Singh, R, Kumar, A, Ghosh, B, Jamdar, S.N, Makde, R.D.
Deposit date:2016-06-24
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases.
Proteins, 2018
5GIU
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BU of 5giu by Molmil
Crystal structure of Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site
Descriptor: PHOSPHATE ION, Proline dipeptidase, SODIUM ION
Authors:Are, V.N, Kumar, A, Singh, R, Ghosh, B, Jamdar, S.N, Makde, R.D.
Deposit date:2016-06-25
Release date:2017-06-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Xaa-Pro peptidase from Deinococcus radiodurans, metal-free active site
To Be Published
4ZNG
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BU of 4zng by Molmil
X-ray crystallography of recombinant Lactococcus lactis prolidase
Descriptor: CACODYLATE ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Kgosisejo, O, Grochulski, P, Tanaka, T.
Deposit date:2015-05-04
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:X-ray crystallography of recombinant Lactococcus lactis prolidase
To Be Published
5CDE
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BU of 5cde by Molmil
R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris
Descriptor: Proline dipeptidase, SULFATE ION, ZINC ION
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
Deposit date:2015-07-03
Release date:2016-09-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris at 1.85 Angstrom resolution
To Be Published
5CDL
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BU of 5cdl by Molmil
Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
Deposit date:2015-07-04
Release date:2016-08-10
Last modified:2018-07-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Proline dipeptidase from Deinococcus radiodurans (selenomethionine derivative)
To Be Published
5CDV
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BU of 5cdv by Molmil
Proline dipeptidase from Deinococcus radiodurans R1
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Proline dipeptidase, ...
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
Deposit date:2015-07-05
Release date:2016-08-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Proline dipeptidase from Deinococcus radiodurans R1 at 1.45 Angstrom resolution
To Be Published
5CIK
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BU of 5cik by Molmil
Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris in citrate condition
Descriptor: CITRIC ACID, GLYCEROL, Proline dipeptidase
Authors:Kumar, A, Are, V, Ghosh, B, Agrawal, U, Jamdar, S, Makde, R.D.
Deposit date:2015-07-13
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Xaa-Pro dipeptidase from Xanthomonas campestris in citrate condition
To Be Published
5CNX
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BU of 5cnx by Molmil
Crystal structure of Xaa-Pro aminopeptidase from Escherichia coli K12
Descriptor: Aminopeptidase YpdF, CACODYLATE ION, GLYCEROL, ...
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.D.
Deposit date:2015-07-18
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures and activities of widely conserved small prokaryotic aminopeptidases-P clarify classification of M24B peptidases
Proteins, 2018
3Q6D
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BU of 3q6d by Molmil
Xaa-Pro dipeptidase from Bacillus anthracis.
Descriptor: CALCIUM ION, GLYCEROL, Proline dipeptidase
Authors:Osipiuk, J, Makowska-Grzyska, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-12-31
Release date:2011-02-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Xaa-Pro dipeptidase from Bacillus anthracis.
To be Published
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