Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8JNF
DownloadVisualize
BU of 8jnf by Molmil
The cryo-EM structure of the RAD51 filament bound to the nucleosome
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-06-06
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.91 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
7EE8
DownloadVisualize
BU of 7ee8 by Molmil
The crystal structure of MIF bound to compound D5
Descriptor: 3-[(2R)-2-azanyl-1-oxidanyl-propyl]phenol, 3-[(2S)-2-azanyl-1-oxidanyl-propyl]phenol, CHLORIDE ION, ...
Authors:Fan, C.P, Guo, D.Y, Yang, L.
Deposit date:2021-03-17
Release date:2025-03-26
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Repurposing old drugs as novel inhibitors of human MIF from structural and functional analysis.
Bioorg.Med.Chem.Lett., 55, 2022
7EDQ
DownloadVisualize
BU of 7edq by Molmil
MIF complex to compound7
Descriptor: 6,7-bis(oxidanyl)chromen-2-one, CHLORIDE ION, Macrophage migration inhibitory factor
Authors:Fan, C.P, Guo, D.Y, Yang, L.
Deposit date:2021-03-16
Release date:2025-03-26
Method:X-RAY DIFFRACTION (1.266 Å)
Cite:Repurposing old drugs as novel inhibitors of human MIF from structural and functional analysis.
Bioorg.Med.Chem.Lett., 55, 2022
8JND
DownloadVisualize
BU of 8jnd by Molmil
The cryo-EM structure of the nonameric RAD51 ring bound to the nucleosome with the linker DNA binding
Descriptor: DNA (153-MER), DNA (156-MER), DNA repair protein RAD51 homolog 1, ...
Authors:Shioi, T, Hatazawa, S, Ogasawara, M, Takizawa, Y, Kurumizaka, H.
Deposit date:2023-06-06
Release date:2024-03-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Cryo-EM structures of RAD51 assembled on nucleosomes containing a DSB site.
Nature, 628, 2024
3LUB
DownloadVisualize
BU of 3lub by Molmil
Crystal structure of Putative creatinine amidohydrolase (YP_211512.1) from Bacteroides fragilis NCTC 9343 at 2.11 A resolution
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-02-17
Release date:2010-03-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of Putative creatinine amidohydrolase (YP_211512.1) from Bacteroides fragilis NCTC 9343 at 2.11 A resolution
To be published
7ESF
DownloadVisualize
BU of 7esf by Molmil
The Crystal Structure of human MTH1 from Biortus
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, DI(HYDROXYETHYL)ETHER, TETRAETHYLENE GLYCOL
Authors:Wang, F, Cheng, W, Shang, H, Wang, R, Zhang, B, Tian, F.
Deposit date:2021-05-10
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:The Crystal Structure of human MTH1 from Biortus
To Be Published
1A5N
DownloadVisualize
BU of 1a5n by Molmil
K217A VARIANT OF KLEBSIELLA AEROGENES UREASE, CHEMICALLY RESCUED BY FORMATE AND NICKEL
Descriptor: FORMIC ACID, NICKEL (II) ION, UREASE (ALPHA SUBUNIT), ...
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
3LV4
DownloadVisualize
BU of 3lv4 by Molmil
Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis. Northeast Structural Genomics Consortium Target BiR14.
Descriptor: ACETATE ION, CALCIUM ION, Glycoside hydrolase YxiA
Authors:Vorobiev, S, Abashidze, M, Seetharaman, J, Belote, R.L, Ciccosanti, C, Sahdev, S, Xiao, R, Acton, T.B, Everett, J.K, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.695 Å)
Cite:Crystal structure of the glycoside hydrolase, family 43 YxiA protein from Bacillus licheniformis.
To be Published
7ESS
DownloadVisualize
BU of 7ess by Molmil
Structure-guided studies of the Holliday junction resolvase RuvX provide novel insights into ATP-stimulated cleavage of branched DNA and RNA substrates
Descriptor: Putative pre-16S rRNA nuclease
Authors:Thakur, M, Mohan, D, Singh, A.K, Agarwal, A, Gopal, B, Muniyappa, K.
Deposit date:2021-05-11
Release date:2021-05-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Novel insights into ATP-Stimulated Cleavage of branched DNA and RNA Substrates through Structure-Guided Studies of the Holliday Junction Resolvase RuvX.
J.Mol.Biol., 433, 2021
8K7G
DownloadVisualize
BU of 8k7g by Molmil
Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3S,4R,5R)-2,5-bis(hydroxymethyl)pyrrolidine-3,4-diol
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2,5-bis(hydroxymethyl)pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Y, Huang, K.F, Ko, T.P, Cheng, W.C.
Deposit date:2023-07-26
Release date:2024-04-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase.
Jacs Au, 4, 2024
8K7J
DownloadVisualize
BU of 8k7j by Molmil
Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3R,4S,5R)-2-((dimethylamino)methyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2-[(dimethylamino)methyl]-5-(hydroxymethyl)pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Y, Huang, K.F, Ko, T.P, Cheng, W.C.
Deposit date:2023-07-26
Release date:2024-04-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase.
Jacs Au, 4, 2024
1ANJ
DownloadVisualize
BU of 1anj by Molmil
ALKALINE PHOSPHATASE (K328H)
Descriptor: ALKALINE PHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Murphy, J.E, Tibbitts, T.T, Kantrowitz, E.R.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutations at positions 153 and 328 in Escherichia coli alkaline phosphatase provide insight towards the structure and function of mammalian and yeast alkaline phosphatases.
J.Mol.Biol., 253, 1995
3LXH
DownloadVisualize
BU of 3lxh by Molmil
Crystal Structure of Cytochrome P450 CYP101D1
Descriptor: 1,4-DIETHYLENE DIOXIDE, Cytochrome P450, PHOSPHATE ION, ...
Authors:Yang, W, Bell, S.G, Wang, H, Bartlam, M, Wong, L.L, Rao, Z.
Deposit date:2010-02-25
Release date:2010-06-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular characterization of a class I P450 electron transfer system from Novosphingobium aromaticivorans DSM12444
J.Biol.Chem., 285, 2010
1AJC
DownloadVisualize
BU of 1ajc by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
Descriptor: ALKALINE PHOSPHATASE, MAGNESIUM ION, ZINC ION
Authors:Dealwis, C.G, Chen, L, Abad-Zapatero, C.
Deposit date:1995-07-18
Release date:1995-11-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystallographic analysis of reversible metal binding observed in a mutant (Asp153-->Gly) of Escherichia coli alkaline phosphatase.
Biochemistry, 34, 1995
8K7F
DownloadVisualize
BU of 8k7f by Molmil
Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3S,4R,5R)-2,5-bis(hydroxymethyl)pyrrolidine-3,4-diol
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2,5-bis(hydroxymethyl)pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Y, Huang, K.F, Ko, T.P, Cheng, W.C.
Deposit date:2023-07-26
Release date:2024-04-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase.
Jacs Au, 4, 2024
1A5K
DownloadVisualize
BU of 1a5k by Molmil
K217E VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998
8K7H
DownloadVisualize
BU of 8k7h by Molmil
Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3S,4R)-2-(hydroxymethyl)-1-methylpyrrolidine-3,4-diol
Descriptor: (2~{R},3~{S},4~{R})-2-(hydroxymethyl)-1-methyl-pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Y, Huang, K.F, Ko, T.P, Cheng, W.C.
Deposit date:2023-07-26
Release date:2024-04-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase.
Jacs Au, 4, 2024
1ANI
DownloadVisualize
BU of 1ani by Molmil
ALKALINE PHOSPHATASE (D153H, K328H)
Descriptor: ALKALINE PHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Murphy, J.E, Tibbitts, T.T, Kantrowitz, E.R.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mutations at positions 153 and 328 in Escherichia coli alkaline phosphatase provide insight towards the structure and function of mammalian and yeast alkaline phosphatases.
J.Mol.Biol., 253, 1995
1A9Z
DownloadVisualize
BU of 1a9z by Molmil
UDP-GALACTOSE 4-EPIMERASE MUTANT S124A/Y149F COMPLEXED WITH UDP-GALACTOSE
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION, TRIETHYLENE GLYCOL, ...
Authors:Thoden, J.B, Holden, H.M.
Deposit date:1998-04-14
Release date:1998-10-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dramatic differences in the binding of UDP-galactose and UDP-glucose to UDP-galactose 4-epimerase from Escherichia coli.
Biochemistry, 37, 1998
8K7D
DownloadVisualize
BU of 8k7d by Molmil
Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3R,4S,5R)-2-(aminomethyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol
Descriptor: (2~{R},3~{R},4~{S},5~{R})-2-(aminomethyl)-5-(hydroxymethyl)pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Y, Huang, K.F, Ko, T.P, Cheng, W.C.
Deposit date:2023-07-26
Release date:2024-04-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase.
Jacs Au, 4, 2024
3LSB
DownloadVisualize
BU of 3lsb by Molmil
Crystal structure of the mutant E241Q of atrazine chlorohydrolase TrzN from Arthrobacter aurescens TC1 complexed with zinc and ametrin
Descriptor: N-ethyl-N'-(1-methylethyl)-6-(methylsulfanyl)-1,3,5-triazine-2,4-diamine, Triazine hydrolase, ZINC ION
Authors:Fedorov, A.A, Fedorov, E.V, Seffernick, J, Wackett, L.P, Almo, S.C.
Deposit date:2010-02-12
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.932 Å)
Cite:Crystal structure of the mutant E241Q of atrazine chlorohydrolase TrzN from Arthrobacter aurescens TC1 complexed with zinc and Ametryn
To be Published
9EZS
DownloadVisualize
BU of 9ezs by Molmil
XFEL structure of free hNQO1 unmixed (P4502)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1
Authors:Martin-Garcia, J.M, Grieco, A, Botha, S.
Deposit date:2024-04-14
Release date:2025-04-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:XFEL structure of free hNQO1 unmixed (P4502)
To Be Published
1AJB
DownloadVisualize
BU of 1ajb by Molmil
THREE-DIMENSIONAL STRUCTURE OF THE D153G MUTANT OF E. COLI ALKALINE PHOSPHATASE: A MUTANT WITH WEAKER MAGNESIUM BINDING AND INCREASED CATALYTIC ACTIVITY
Descriptor: ALKALINE PHOSPHATASE, MAGNESIUM ION, SULFATE ION, ...
Authors:Dealwis, C.G, Chen, L, Abad-Zapatero, C.
Deposit date:1995-08-19
Release date:1995-11-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:3-D structure of the D153G mutant of Escherichia coli alkaline phosphatase: an enzyme with weaker magnesium binding and increased catalytic activity.
Protein Eng., 8, 1995
8K7I
DownloadVisualize
BU of 8k7i by Molmil
Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3S,4R,5R)-2-(hydroxymethyl)-5-((methylamino)methyl)pyrrolidine-3,4-diol
Descriptor: (2~{R},3~{S},4~{R},5~{R})-2-(hydroxymethyl)-5-(methylaminomethyl)pyrrolidine-3,4-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H.Y, Huang, K.F, Ko, T.P, Cheng, W.C.
Deposit date:2023-07-26
Release date:2024-04-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase.
Jacs Au, 4, 2024
1A5L
DownloadVisualize
BU of 1a5l by Molmil
K217C VARIANT OF KLEBSIELLA AEROGENES UREASE
Descriptor: UREASE (ALPHA SUBUNIT), UREASE (BETA SUBUNIT), UREASE (GAMMA SUBUNIT)
Authors:Pearson, M.A, Schaller, R.A, Michel, L.O, Karplus, P.A, Hausinger, R.P.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Chemical rescue of Klebsiella aerogenes urease variants lacking the carbamylated-lysine nickel ligand.
Biochemistry, 37, 1998

237423

건을2025-06-11부터공개중

PDB statisticsPDBj update infoContact PDBjnumon