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8SWH
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BU of 8swh by Molmil
Local refinement of SARS-CoV-2 (HP-GSAS-Mut7) spike NTD in complex with TXG-0078 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, TXG-0078 Fab Heavy chain, ...
Authors:Bangaru, B, Ward, A.
Deposit date:2023-05-18
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.88 Å)
Cite:Deep repertoire mining uncovers ultra-broad coronavirus neutralizing antibodies targeting multiple spike epitopes.
Cell Rep, 43, 2024
8SWX
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BU of 8swx by Molmil
BG505 Boost2 SOSIP.664 in complex with NHP polyclonal antibody Base4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Base4 Heavy Chain, ...
Authors:Pratap, P.P, Antansijevic, A, Ward, A.B.
Deposit date:2023-05-19
Release date:2024-05-22
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Priming antibody responses to the fusion peptide in rhesus macaques.
Npj Vaccines, 9, 2024
8SWW
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BU of 8sww by Molmil
BG505 Boost2 SOSIP.664 in complex with NHP polyclonal antibody IF3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NHP polyclonal antibody IF3 Heavy Chain, ...
Authors:Pratap, P.P, Antansijevic, A, Ward, A.B.
Deposit date:2023-05-19
Release date:2024-05-22
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Priming antibody responses to the fusion peptide in rhesus macaques.
Npj Vaccines, 9, 2024
8D4U
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BU of 8d4u by Molmil
Crystal Structure of Neutrophil Elastase Inhibited by Eap2 from S. aureus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Extracellular Adherence Protein, ...
Authors:Gido, C.D, Herdendorf, T.J, Geisbrecht, B.V.
Deposit date:2022-06-02
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of two distinct neutrophil serine protease-binding modes within a Staphylococcus aureus innate immune evasion protein family.
J.Biol.Chem., 299, 2023
8SW4
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BU of 8sw4 by Molmil
BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 21M20 heavy chain variable region, ...
Authors:Ozorowski, G, Torres, J.L, Zhang, S, Ward, A.B.
Deposit date:2023-05-17
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Neutralizing antibodies induced in non-human primates by germline targeting Env trimer
To Be Published
6YC1
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BU of 6yc1 by Molmil
Crystal structure of the H30A mutant of the light-driven sodium pump KR2 in the pentameric form, pH 8.0
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, RETINAL, ...
Authors:Kovalev, K, Gushchin, I, Gordeliy, V.
Deposit date:2020-03-18
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular mechanism of light-driven sodium pumping.
Nat Commun, 11, 2020
8D4Q
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BU of 8d4q by Molmil
Crystal Structure of Neutrophil Elastase Inhibited by Eap1 from S. aureus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Extracellular Adherence Protein, Neutrophil elastase
Authors:Gido, C.D, Herdendorf, T.J, Geisbrecht, B.V.
Deposit date:2022-06-02
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Characterization of two distinct neutrophil serine protease-binding modes within a Staphylococcus aureus innate immune evasion protein family.
J.Biol.Chem., 299, 2023
1AW6
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BU of 1aw6 by Molmil
GAL4 (CD), NMR, 24 STRUCTURES
Descriptor: CADMIUM ION, GAL4 (CD)
Authors:Baleja, J.D, Wagner, G.
Deposit date:1997-10-10
Release date:1998-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Refined solution structure of the DNA-binding domain of GAL4 and use of 3J(113Cd,1H) in structure determination.
J.Biomol.NMR, 10, 1997
8S0M
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BU of 8s0m by Molmil
Crystal structure of the HKU1 receptor binding domain in complex with TMPRSS2 and the nanobody A01
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody A01, ...
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structural insights into TMPRSS2 maturation and HKU1 binding
To Be Published
7OGU
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BU of 7ogu by Molmil
Plant peptide hormone receptor complex H1C9S1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Roman, A.O, Jimenez-Sandoval, P, Santiago, J.
Deposit date:2021-05-07
Release date:2022-02-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.872 Å)
Cite:HSL1 and BAM1/2 impact epidermal cell development by sensing distinct signaling peptides.
Nat Commun, 13, 2022
8S2E
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BU of 8s2e by Molmil
Fab4251-DS-SOSIP complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ...
Authors:Nortier, P, Perez, L.
Deposit date:2024-02-17
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:RAIN: a Machine Learning-based identification for HIV-1 bNAbs.
Res Sq, 2024
6SAU
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BU of 6sau by Molmil
Structural and functional characterisation of three novel fungal amylases with enhanced stability and pH tolerance.
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, CALCIUM ION, SODIUM ION, ...
Authors:Roth, C, Moroz, O.V, Turkenburg, J.P, Blagova, E, Waterman, J, Ariza, A, Ming, L, Tinaqi, S, Andersen, C, Davies, G.J, Wilson, K.S.
Deposit date:2019-07-17
Release date:2019-10-23
Last modified:2023-03-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural and Functional Characterization of Three Novel Fungal Amylases with Enhanced Stability and pH Tolerance.
Int J Mol Sci, 20, 2019
5IDL
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BU of 5idl by Molmil
Crystal structure of the germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Germline-targeting HIV-1 gp120 engineered outer domain, eOD-GT8
Authors:Julien, J.P, Ereno-Orbea, J, Jardine, J.G, Schief, W.R, Wilson, I.A.
Deposit date:2016-02-24
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:HIV-1 broadly neutralizing antibody precursor B cells revealed by germline-targeting immunogen.
Science, 351, 2016
1AOQ
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BU of 1aoq by Molmil
CYTOCHROME CD1 NITRITE REDUCTASE WITH SUBSTRATE AND PRODUCT BOUND
Descriptor: HEME D, NITRIC OXIDE, NITRITE REDUCTASE, ...
Authors:Williams, P.A, Fulop, V.
Deposit date:1997-07-09
Release date:1998-02-04
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme.
Nature, 389, 1997
1AOF
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BU of 1aof by Molmil
CYTOCHROME CD1 NITRITE REDUCTASE, REDUCED FORM
Descriptor: HEME D, NITRITE REDUCTASE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Williams, P.A, Fulop, V.
Deposit date:1997-07-02
Release date:1997-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme.
Nature, 389, 1997
6YRB
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BU of 6yrb by Molmil
Crystal structure of the tetramerization domain of the glycoprotein Gn (Andes virus) at pH 7.5
Descriptor: Envelope polyprotein, IODIDE ION, RNA (5'-D(*())-R(P*UP*UP*UP*())-3'), ...
Authors:Serris, A, Rey, F.A, Guardado-Calvo, P.
Deposit date:2020-04-20
Release date:2020-10-14
Last modified:2020-10-28
Method:X-RAY DIFFRACTION (2.351 Å)
Cite:The Hantavirus Surface Glycoprotein Lattice and Its Fusion Control Mechanism.
Cell, 183, 2020
1BET
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BU of 1bet by Molmil
NEW PROTEIN FOLD REVEALED BY A 2.3 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF NERVE GROWTH FACTOR
Descriptor: BETA-NERVE GROWTH FACTOR
Authors:Mcdonald, N.Q, Lapatto, R, Murray-Rust, J, Gunning, J, Wlodawer, A, Blundell, T.L.
Deposit date:1993-04-08
Release date:1994-05-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New protein fold revealed by a 2.3-A resolution crystal structure of nerve growth factor.
Nature, 354, 1991
1AOM
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BU of 1aom by Molmil
SUBSTRATE AND PRODUCT BOUND TO CYTOCHROME CD1 NITRITE REDUCTASE
Descriptor: HEME D, NITRIC OXIDE, NITRITE REDUCTASE, ...
Authors:Williams, P.A, Fulop, V.
Deposit date:1997-07-08
Release date:1998-02-04
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Haem-ligand switching during catalysis in crystals of a nitrogen-cycle enzyme.
Nature, 389, 1997
6YQ7
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BU of 6yq7 by Molmil
Taka-amylase
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ...
Authors:Armstrong, Z, Chen, Y, Artola, M, Overkleeft, H, Davies, G.
Deposit date:2020-04-16
Release date:2020-06-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Activity-Based Protein Profiling of Retaining alpha-Amylases in Complex Biological Samples.
J.Am.Chem.Soc., 143, 2021
8SDH
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BU of 8sdh by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC25.56
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Neutralizing antibody CC25.56 Heavy Chain, ...
Authors:Yuan, M, Wilson, I.A.
Deposit date:2023-04-06
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Broadly neutralizing antibodies targeting a conserved silent face of spike RBD resist extreme SARS-CoV-2 antigenic drift.
Biorxiv, 2023
5IBL
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BU of 5ibl by Molmil
Human antibody 6639 in complex with influenza hemagglutinin H1 X-181
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6639 Heavy Chain, 6639 Light Chain, ...
Authors:Raymond, D.D, Harrison, S.C.
Deposit date:2016-02-22
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.39 Å)
Cite:Influenza immunization elicits antibodies specific for an egg-adapted vaccine strain.
Nat. Med., 22, 2016
4X5C
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BU of 4x5c by Molmil
Anthranilate phosphoribosyltransferase variant R193L from Mycobacterium tuberculosis with pyrophosphate/PRPP and Mg2+ bound
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Anthranilate phosphoribosyltransferase, MAGNESIUM ION, ...
Authors:Cookson, T.V.M, Parker, E.J, Lott, J.S.
Deposit date:2014-12-05
Release date:2015-11-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Structures of Mycobacterium tuberculosis Anthranilate Phosphoribosyltransferase Variants Reveal the Conformational Changes That Facilitate Delivery of the Substrate to the Active Site.
Biochemistry, 54, 2015
7B2H
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BU of 7b2h by Molmil
Crystal structure of the methyl-coenzyme M reductase from Methanothermobacter Marburgensis derivatized with xenon
Descriptor: 1,2-ETHANEDIOL, 1-THIOETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Wagner, T, Lemaire, O.N, Engilberge, S.
Deposit date:2020-11-27
Release date:2021-07-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure of a key enzyme for anaerobic ethane activation.
Science, 373, 2021
4X6P
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BU of 4x6p by Molmil
FACTOR XIA (PICHIA PASTORIS; C500S [C122S]) IN COMPLEX WITH THE INHIBITOR (2E)-N-{(1S)-1-[4-(3-amino-1H-indazol-6-yl)-1H-imidazol-2-yl]-2-phenylethyl}-3-[5-chloro-2-(1H-tetrazol-1-yl)phenyl]prop-2-enamide
Descriptor: (2E)-N-{(1S)-1-[4-(3-amino-1H-indazol-6-yl)-1H-imidazol-2-yl]-2-phenylethyl}-3-[5-chloro-2-(1H-tetrazol-1-yl)phenyl]prop-2-enamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, ...
Authors:Sheriff, S.
Deposit date:2014-12-08
Release date:2015-02-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure-based design of inhibitors of coagulation factor XIa with novel P1 moieties.
Bioorg.Med.Chem.Lett., 25, 2015
8FOX
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BU of 8fox by Molmil
AbeH (Tryptophan-5-halogenase)
Descriptor: SULFATE ION, Tryptophan 5-halogenase
Authors:Ashaduzzaman, M, Bellizzi, J.J.
Deposit date:2023-01-03
Release date:2023-08-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystallographic and thermodynamic evidence of negative cooperativity of flavin and tryptophan binding in the flavin-dependent halogenases AbeH and BorH.
Biorxiv, 2023

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