Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CWQ
DownloadVisualize
BU of 1cwq by Molmil
M INTERMEDIATE STRUCTURE OF THE WILD TYPE BACTERIORHODOPSIN IN COMBINATION WITH THE GROUND STATE STRUCTURE
Descriptor: BACTERIORHODOPSIN ("M" STATE INTERMEDIATE IN COMBINATION WITH GROUND STATE), HEXANE, N-OCTANE, ...
Authors:Sass, H.J, Berendzen, J, Neff, D, Gessenich, R, Ormos, P, Bueldt, G.
Deposit date:1999-08-26
Release date:1999-10-20
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin.
Nature, 406, 2000
1DZE
DownloadVisualize
BU of 1dze by Molmil
Structure of the M Intermediate of Bacteriorhodopsin trapped at 100K
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
Authors:Takeda, K, Matsui, Y, Sato, H, Hino, T, Kanamori, E, Okumura, H, Yamane, T, Iizuka, T, Kamiya, N, Adachi, S, Kouyama, T.
Deposit date:2000-02-25
Release date:2000-08-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the M Intermediate of Bacteriorhodopsin: Allosteric Structural Changes Mediated by Sliding Movement of a Transmembrane Helix
J.Mol.Biol., 341, 2004
1BRD
DownloadVisualize
BU of 1brd by Molmil
Model for the structure of Bacteriorhodopsin based on high-resolution Electron Cryo-microscopy
Descriptor: BACTERIORHODOPSIN PRECURSOR, RETINAL
Authors:Henderson, R, Baldwin, J.M, Ceska, T.A, Zemlin, F, Beckmann, E, Downing, K.H.
Deposit date:1990-05-23
Release date:1991-04-15
Last modified:2024-04-17
Method:ELECTRON CRYSTALLOGRAPHY (3.5 Å)
Cite:Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.
J.Mol.Biol., 213, 1990
1BRR
DownloadVisualize
BU of 1brr by Molmil
X-RAY STRUCTURE OF THE BACTERIORHODOPSIN TRIMER/LIPID COMPLEX
Descriptor: 3,7,11,15-TETRAMETHYL-HEXADECAN-1-OL, 3-O-sulfo-beta-D-galactopyranose-(1-6)-alpha-D-mannopyranose-(1-2)-alpha-D-glucopyranose, GLYCEROL, ...
Authors:Essen, L.-O, Siegert, R, Oesterhelt, D.
Deposit date:1998-07-28
Release date:1998-09-30
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Lipid patches in membrane protein oligomers: crystal structure of the bacteriorhodopsin-lipid complex
Proc.Natl.Acad.Sci.USA, 95, 1998
1C3W
DownloadVisualize
BU of 1c3w by Molmil
BACTERIORHODOPSIN/LIPID COMPLEX AT 1.55 A RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN (GROUND STATE WILD TYPE "BR"), ...
Authors:Luecke, H.
Deposit date:1999-07-28
Release date:1999-09-15
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structure of bacteriorhodopsin at 1.55 A resolution.
J.Mol.Biol., 291, 1999
1C8R
DownloadVisualize
BU of 1c8r by Molmil
BACTERIORHODOPSIN D96N BR STATE AT 2.0 A RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, PROTEIN (BACTERIORHODOPSIN), ...
Authors:Luecke, H.
Deposit date:1999-07-29
Release date:1999-10-20
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural changes in bacteriorhodopsin during ion transport at 2 angstrom resolution.
Science, 286, 1999
1BRX
DownloadVisualize
BU of 1brx by Molmil
BACTERIORHODOPSIN/LIPID COMPLEX
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Luecke, H, Richter, H.T, Lanyi, J.
Deposit date:1998-05-28
Release date:1999-01-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Proton transfer pathways in bacteriorhodopsin at 2.3 angstrom resolution.
Science, 280, 1998
1F4Z
DownloadVisualize
BU of 1f4z by Molmil
BACTERIORHODOPSIN-M PHOTOINTERMEDIATE STATE OF THE E204Q MUTANT AT 1.8 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN, ...
Authors:Luecke, H, Schobert, B, Cartailler, J.P, Richter, H.T, Rosengarth, A, Needleman, R, Lanyi, J.K.
Deposit date:2000-06-10
Release date:2000-08-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin.
J.Mol.Biol., 300, 2000
1BCT
DownloadVisualize
BU of 1bct by Molmil
THREE-DIMENSIONAL STRUCTURE OF PROTEOLYTIC FRAGMENT 163-231 OF BACTERIOOPSIN DETERMINED FROM NUCLEAR MAGNETIC RESONANCE DATA IN SOLUTION
Descriptor: BACTERIORHODOPSIN
Authors:Nolde, D.E, Barsukov, I.L, Lomize, A.L, Arseniev, A.S.
Deposit date:1993-07-07
Release date:1994-04-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of proteolytic fragment 163-231 of bacterioopsin determined from nuclear magnetic resonance data in solution.
Eur.J.Biochem., 206, 1992
1AT9
DownloadVisualize
BU of 1at9 by Molmil
STRUCTURE OF BACTERIORHODOPSIN AT 3.0 ANGSTROM DETERMINED BY ELECTRON CRYSTALLOGRAPHY
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Kimura, Y, Vassylyev, D.G, Miyazawa, A, Kidera, A, Matsushima, M, Mitsuoka, K, Murata, K, Hirai, T, Fujiyoshi, Y.
Deposit date:1997-08-20
Release date:1998-09-16
Last modified:2024-06-05
Method:ELECTRON CRYSTALLOGRAPHY (2.8 Å)
Cite:Surface of bacteriorhodopsin revealed by high-resolution electron crystallography.
Nature, 389, 1997
1F50
DownloadVisualize
BU of 1f50 by Molmil
BACTERIORHODOPSIN-BR STATE OF THE E204Q MUTANT AT 1.7 ANGSTROM RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, BACTERIORHODOPSIN, ...
Authors:Luecke, H, Schobert, B, Cartailler, J.P, Richter, H.T, Rosengarth, A, Needleman, R, Lanyi, J.K.
Deposit date:2000-06-10
Release date:2000-08-09
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Coupling photoisomerization of retinal to directional transport in bacteriorhodopsin.
J.Mol.Biol., 300, 2000
1FBK
DownloadVisualize
BU of 1fbk by Molmil
CRYSTAL STRUCTURE OF CYTOPLASMICALLY OPEN CONFORMATION OF BACTERIORHODOPSIN
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Subramaniam, S, Henderson, R.
Deposit date:2000-07-15
Release date:2000-08-09
Last modified:2021-11-03
Method:ELECTRON CRYSTALLOGRAPHY (3.2 Å)
Cite:Molecular mechanism of vectorial proton translocation by bacteriorhodopsin.
Nature, 406, 2000
1QKO
DownloadVisualize
BU of 1qko by Molmil
HIGH RESOLUTION X-RAY STRUCTURE OF AN EARLY INTERMEDIATE IN THE BACTERIORHODOPSIN PHOTOCYCLE
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Edman, K, Nollert, P, Royant, A, Belrhali, H, Pebay-Peyroula, E, Hajdu, J, Neutze, R, Landau, E.M.
Deposit date:1999-07-30
Release date:1999-10-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High Resolution X-Ray Structure of an Early Intermediate in the Bacteriorhodopsin Photocycle
Nature, 401, 1999
1P8H
DownloadVisualize
BU of 1p8h by Molmil
BACTERIORHODOPSIN M1 INTERMEDIATE PRODUCED AT ROOM TEMPERATURE
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
Authors:Lanyi, J.K.
Deposit date:2003-05-07
Release date:2003-07-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystallographic Structures of the M and N Intermediates of Bacteriorhodopsin: Assembly of a Hydrogen-Bonded Chain of Water Molecules between Asp-96 and the Retinal Schiff Base
J.Mol.Biol., 330, 2003
1P8I
DownloadVisualize
BU of 1p8i by Molmil
F219L BACTERIORHODOPSIN MUTANT
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
Authors:Lanyi, J.K.
Deposit date:2003-05-07
Release date:2003-07-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystallographic Structures of the M and N Intermediates of Bacteriorhodopsin: Assembly of a Hydrogen-Bonded Chain of Water Molecules between Asp-96 and the Retinal Schiff Base
J.Mol.Biol., 330, 2003
1QM8
DownloadVisualize
BU of 1qm8 by Molmil
Structure of Bacteriorhodopsin at 100 K
Descriptor: 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, 3-PHOSPHORYL-[1,2-DI-PHYTANYL]GLYCEROL, ...
Authors:Takeda, K, Matsui, Y, Sato, H, Hino, T, Kanamori, E, Okumura, H, Yamane, T, Kamiya, N, Kouyama, T.
Deposit date:1999-09-22
Release date:2000-08-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Three-Dimensional Crystal of Bacteriorhodopsin Obtained by Successive Fusion of the Vesicular Assemblies.
J.Mol.Biol., 283, 1998
1R84
DownloadVisualize
BU of 1r84 by Molmil
NMR structure of the 13-cis-15-syn retinal in dark_adapted bacteriorhodopsin
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Patzelt, H, Simon, B, Ter Laak, A, Kessler, B, Kuhne, R, Schmieder, P, Oesterhaelt, D, Oschkinat, H.
Deposit date:2003-10-23
Release date:2003-11-11
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The structures of the active center in dark-adapted bacteriorhodopsin by solution-state NMR spectroscopy
Proc.Natl.Acad.Sci.USA, 99, 2002
1QHJ
DownloadVisualize
BU of 1qhj by Molmil
X-RAY STRUCTURE OF BACTERIORHODOPSIN GROWN IN LIPIDIC CUBIC PHASES
Descriptor: 1,2-[DI-2,6,10,14-TETRAMETHYL-HEXADECAN-16-OXY]-PROPANE, PROTEIN (BACTERIORHODOPSIN), RETINAL
Authors:Belrhali, H, Nollert, P, Royant, A, Menzel, C, Rosenbusch, J.P, Landau, E.M, Pebay-Peyroula, E.
Deposit date:1999-05-04
Release date:1999-07-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein, lipid and water organization in bacteriorhodopsin crystals: a molecular view of the purple membrane at 1.9 A resolution.
Structure Fold.Des., 7, 1999
1QKP
DownloadVisualize
BU of 1qkp by Molmil
HIGH RESOLUTION X-RAY STRUCTURE OF AN EARLY INTERMEDIATE IN THE BACTERIORHODOPSIN PHOTOCYCLE
Descriptor: BACTERIORHODOPSIN, RETINAL
Authors:Edman, K, Nollert, P, Royant, A, Belrhali, H, Pebay-Peyroula, E, Hajdu, J, Neutze, R, Landau, E.M.
Deposit date:1999-07-30
Release date:1999-10-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution X-ray structure of an early intermediate in the bacteriorhodopsin photocycle.
Nature, 401, 1999
1R2N
DownloadVisualize
BU of 1r2n by Molmil
NMR structure of the all-trans retinal in dark-adapted Bacteriorhodopsin
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Patzelt, H, Simon, B, terLaak, A, Kessler, B, Kuhne, R, Schmieder, P, Oesterhaelt, D, Oschkinat, H.
Deposit date:2003-09-29
Release date:2003-10-28
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The structures of the active center in dark-adapted bacteriorhodopsin by solution-state NMR spectroscopy
Proc.Natl.Acad.Sci.USA, 99, 2002
1P8U
DownloadVisualize
BU of 1p8u by Molmil
BACTERIORHODOPSIN N' INTERMEDIATE AT 1.62 A RESOLUTION
Descriptor: 1-[2,6,10.14-TETRAMETHYL-HEXADECAN-16-YL]-2-[2,10,14-TRIMETHYLHEXADECAN-16-YL]GLYCEROL, 2,10,23-TRIMETHYL-TETRACOSANE, Bacteriorhodopsin, ...
Authors:Lanyi, J.K.
Deposit date:2003-05-07
Release date:2003-07-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystallographic Structures of the M and N Intermediates of Bacteriorhodopsin: Assembly of a Hydrogen-Bonded Chain of Water Molecules between Asp-96 and the Retinal Schiff Base
J.Mol.Biol., 330, 2003
1S51
DownloadVisualize
BU of 1s51 by Molmil
Thr24Ser Bacteriorhodopsin
Descriptor: RETINAL, bacteriorhodopsin
Authors:Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
Deposit date:2004-01-19
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004
1S54
DownloadVisualize
BU of 1s54 by Molmil
Thr24Ala Bacteriorhodopsin
Descriptor: RETINAL, bacteriorhodopsin
Authors:Yohannan, S, Faham, S, Yang, D, Grosfeld, D, Chamberlain, A.K, Bowie, J.U.
Deposit date:2004-01-19
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A C(alpha)-H.O Hydrogen Bond in a Membrane Protein Is Not Stabilizing
J.Am.Chem.Soc., 126, 2004
6GAA
DownloadVisualize
BU of 6gaa by Molmil
BACTERIORHODOPSIN, 430 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
Authors:Nass Kovacs, G, Colletier, J.-P, Gruenbein, M.L, Stensitzki, T, Batyuk, A, Carbajo, S, Doak, R.B, Ehrenberg, D, Foucar, L, Gasper, R, Gorel, A, Hilpert, M, Kloos, M, Koglin, J, Reinstein, J, Roome, C.M, Schlesinger, R, Seaberg, M, Shoeman, R.L, Stricker, M, Boutet, S, Haacke, S, Heberle, J, Domratcheva, T, Schlichting, I.
Deposit date:2018-04-11
Release date:2019-04-24
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.
Nat Commun, 10, 2019
6GAE
DownloadVisualize
BU of 6gae by Molmil
BACTERIORHODOPSIN, 560 FS STATE, REAL-SPACE REFINED AGAINST 15% EXTRAPOLATED STRUCTURE FACTORS
Descriptor: 2,3-DI-PHYTANYL-GLYCEROL, Bacteriorhodopsin, DECANE, ...
Authors:Nass Kovacs, G, Colletier, J.-P, Gruenbein, M.L, Stensitzki, T, Batyuk, A, Carbajo, S, Doak, R.B, Ehrenberg, D, Foucar, L, Gasper, R, Gorel, A, Hilpert, M, Kloos, M, Koglin, J, Reinstein, J, Roome, C.M, Schlesinger, R, Seaberg, M, Shoeman, R.L, Stricker, M, Boutet, S, Haacke, S, Heberle, J, Domratcheva, T, Schlichting, I.
Deposit date:2018-04-11
Release date:2019-04-24
Last modified:2019-07-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.
Nat Commun, 10, 2019

224931

건을2024-09-11부터공개중

PDB statisticsPDBj update infoContact PDBjnumon