PDB: 223532 resultsInfo pagesStatus searchChemie searchBIRD

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6PHV	SpAga galactose product complex structure Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-galactosidase, ... Authors: Pluvinage, B, Boraston, A.B. Deposit date: 2019-06-25 Release date: 2019-10-02 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Molecular analysis of an enigmaticStreptococcus pneumoniaevirulence factor: The raffinose-family oligosaccharide utilization system. J.Biol.Chem., 294, 2019
6W9D	RNF12 RING domain in complex with a Ube2d2~Ub conjugate Descriptor: E3 ubiquitin-protein ligase RLIM, IODIDE ION, Ubiquitin, ... Authors: Middleton, A.J, Day, C.L. Deposit date: 2020-03-22 Release date: 2020-05-20 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.19 Å) Cite: The RING Domain of RING Finger 12 Efficiently Builds Degradative Ubiquitin Chains. J.Mol.Biol., 432, 2020
6P0S	Crystal structure of ternary DNA complex "FX2" containing E. coli Fis and phage lambda Xis Descriptor: DNA (27-MER), FX1-2, DNA-binding protein Fis, ... Authors: Hancock, S.P, Cascio, D, Johnson, R.C. Deposit date: 2019-05-17 Release date: 2019-06-19 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Cooperative DNA binding by proteins through DNA shape complementarity. Nucleic Acids Res., 47, 2019
6P7T	Crystal structure of apo ToxT K231A from Vibrio cholerae strain SCE256 Descriptor: Toxin co-regulated pilus virulence regulatory protein Authors: Cruite, J.T, Kull, F.J. Deposit date: 2019-06-06 Release date: 2020-01-01 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for virulence regulation inVibrio choleraeby unsaturated fatty acid components of bile. Commun Biol, 2, 2019
6PAB	E. coli L-asparaginase II in complex with L-Asp at pH 7.0 Descriptor: ASPARTIC ACID, CITRIC ACID, IMIDAZOLE, ... Authors: Lubkowski, J, Wlodawer, A. Deposit date: 2019-06-11 Release date: 2019-09-04 Last modified: 2019-10-02 Method: X-RAY DIFFRACTION (1.73 Å) Cite: Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci., 28, 2019
6W3H	Brain delivery of therapeutic proteins using an Fc fragment blood-brain barrier transport vehicle in mice and monkeys Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ATV Fc, Transferrin receptor protein 1,Transferrin receptor protein 1 Authors: Srivastava, A, Kariolis, M, Wells, R. Deposit date: 2020-03-09 Release date: 2020-06-10 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.38 Å) Cite: Brain delivery of therapeutic proteins using an Fc fragment blood-brain barrier transport vehicle in mice and monkeys. Sci Transl Med, 12, 2020
6W5A	Crystal Structure of the Fab fragment of humanized 5c8 antibody containing the fluorescent non-canonical amino acid L-(7-hydroxycoumarin-4-yl)ethylglycine at pH 9.7 Descriptor: Antibody 5c8* Fab Heavy Chain, Antibody 5c8* Fab Light Chain Authors: Henderson, J.N, Simmons, C.R, Mills, J.H. Deposit date: 2020-03-12 Release date: 2020-12-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural Insights into How Protein Environments Tune the Spectroscopic Properties of a Noncanonical Amino Acid Fluorophore. Biochemistry, 59, 2020
6W8M	Co-crystal structures of CHIKV nsP3 macrodomain with pyrimidone fragments Descriptor: 2-oxo-1,2-dihydroquinazoline-4-carboxylic acid, Nonstructural polyprotein Authors: Zhang, S, Garzan, A, Pathak, A.K, Augelli-Szafran, C.E, Wu, M. Deposit date: 2020-03-20 Release date: 2021-01-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Pyrimidone inhibitors targeting Chikungunya Virus nsP3 macrodomain by fragment-based drug design. Plos One, 16, 2021
6W8E	Crystal Structure Analysis of Space-grown Lysozyme Descriptor: CHLORIDE ION, Lysozyme Authors: Fernandez, D, Russi, S. Deposit date: 2020-03-20 Release date: 2020-04-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.68 Å) Cite: Protein structural changes on a CubeSat under rocket acceleration profile. NPJ Microgravity, 6, 2020
6PA6	ECAII(T89V,K162T) MUTANT IN COMPLEX WITH L-ASN AT PH 8.3 in space group C2 Descriptor: ASPARAGINE, IMIDAZOLE, L-asparaginase 2 Authors: Lubkowski, J, Wlodawer, A. Deposit date: 2019-06-11 Release date: 2019-09-04 Last modified: 2019-10-02 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci., 28, 2019
6PAA	E. coli L-asparaginase II mutant (T12V) in complex with L-Asp at pH 5.5 Descriptor: ASPARTIC ACID, L-asparaginase 2 Authors: Lubkowski, J, Wlodawer, A. Deposit date: 2019-06-11 Release date: 2019-09-04 Last modified: 2019-10-02 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci., 28, 2019
6VYC	Crystal structure of WD-repeat domain of human WDR91 Descriptor: UNKNOWN ATOM OR ION, WD repeat-containing protein 91 Authors: Halabelian, L, Hutchinson, A, Li, Y, Seitova, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC) Deposit date: 2020-02-26 Release date: 2020-03-25 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning. J.Med.Chem., 66, 2023
6ZQR	Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1 with GlcNAc ligand bound Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CALCIUM ION, ... Authors: Shrive, A.K, Greenhough, T.J, Williams, H.M. Deposit date: 2020-07-10 Release date: 2021-07-21 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Crystal structures of human immune protein FIBCD1 suggest an extended binding site compatible with recognition of pathogen associated carbohydrate motifs J.Biol.Chem., 2023
6P18	Q21 transcription antitermination complex: loading complex Descriptor: DNA (67-MER) fragment carrying phage-21 pR' promoter and pause element, nontemplate strand, template strand, ... Authors: Yin, Z, Ebright, R.H. Deposit date: 2019-05-19 Release date: 2019-06-26 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Structural basis of Q-dependent antitermination. Proc.Natl.Acad.Sci.USA, 116, 2019
4QVU	Crystal structure of a DUF4931 family protein (BCE0241) from Bacillus cereus ATCC 10987 at 2.65 A resolution Descriptor: SODIUM ION, TETRAETHYLENE GLYCOL, Uncharacterized protein, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2014-07-15 Release date: 2014-08-06 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Crystal structure of a hypothetical protein (BCE0241) from Bacillus cereus ATCC 10987 at 2.65 A resolution To be published
3BOS	Crystal structure of a putative dna replication regulator HDA (SAMA_1916) from Shewanella amazonensis sb2b at 1.75 A resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CYTIDINE-5'-DIPHOSPHATE, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2007-12-17 Release date: 2008-01-15 Last modified: 2023-01-25 Method: X-RAY DIFFRACTION (1.75 Å) Cite: A structural basis for the regulatory inactivation of DnaA. J.Mol.Biol., 385, 2009
4R2I	The Crystal Structure of STIV B204 complexed with AMP-PNP Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, STIV B204 ATPase, ZINC ION Authors: Dellas, N, Nicolay, S.J, Young, M.J. Deposit date: 2014-08-12 Release date: 2016-01-13 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structure-Based Mutagenesis of Sulfolobus Turreted Icosahedral Virus B204 Reveals Essential Residues in the Virion-Associated DNA-Packaging ATPase. J.Virol., 90, 2015
4QRL	Crystal structure of a lipocalin-like protein (BACUNI_01346) from Bacteroides uniformis ATCC 8492 at 1.79 A resolution Descriptor: 1,2-ETHANEDIOL, Hypothetical protein Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2014-07-01 Release date: 2014-08-27 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Crystal structure of a hypothetical protein (BACUNI_01346) from Bacteroides uniformis ATCC 8492 at 1.79 A resolution To be Published
3C8W	Crystal structure of acetoacetate decarboxylase (ADC) (YP_094708.1) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1 at 1.60 A resolution Descriptor: Acetoacetate decarboxylase ADC, CITRIC ACID Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2008-02-13 Release date: 2008-02-26 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of acetoacetate decarboxylase (ADC) (YP_094708.1) from Legionella pneumophila subsp. pneumophila str. Philadelphia 1 at 1.60 A resolution To be published
3C8V	Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, MAGNESIUM ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2008-02-13 Release date: 2008-02-26 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Crystal structure of putative acetyltransferase (YP_390128.1) from Desulfovibrio desulfuricans G20 at 2.28 A resolution To be published
3CCG	Crystal structure of predicted HD superfamily hydrolase involved in NAD metabolism (NP_347894.1) from Clostridium acetobutylicum at 1.50 A resolution Descriptor: FE (III) ION, HD superfamily hydrolase, PHOSPHATE ION Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2008-02-25 Release date: 2008-03-11 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of predicted HD superfamily hydrolase involved in NAD metabolism (NP_347894.1) from Clostridium acetobutylicum at 1.50 A resolution To be published
3CC8	Crystal structure of a putative methyltransferase (bce_1332) from bacillus cereus atcc 10987 at 1.64 A resolution Descriptor: NICKEL (II) ION, Putative methyltransferase Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2008-02-25 Release date: 2008-03-04 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.64 Å) Cite: Crystal structure of putative methyltransferase from NDP-N-methyl-L-glucosamine biosynthetic pathway (NP_977653.1) from Bacillus cereus ATCC 10987 at 1.64 A resolution To be published
7AGE	Protease Sapp1p from Candida parapsilosis in complex with KB32 Descriptor: Candidapepsin, DI(HYDROXYETHYL)ETHER, Pepstatin Authors: Dostal, J, Heidingsfeld, O, Brynda, J. Deposit date: 2020-09-22 Release date: 2021-04-21 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural determinants for subnanomolar inhibition of the secreted aspartic protease Sapp1p from Candida parapsilosis . J Enzyme Inhib Med Chem, 36, 2021
3CC1	CRYSTAL STRUCTURE OF A PUTATIVE ALPHA-N-ACETYLGALACTOSAMINIDASE (BH1870) FROM BACILLUS HALODURANS C-125 AT 2.00 A RESOLUTION Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2008-02-23 Release date: 2008-03-18 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of putative alpha-N-acetylgalactosaminidase (NP_242736.1) from Bacillus halodurans at 2.00 A resolution To be published
4R24	Complete dissection of B. subtilis nitrogen homeostatic circuitry Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*GP*GP*AP*AP*TP*TP*CP*TP*GP*AP*CP*AP*CP*G)-3'), HTH-type transcriptional regulator TnrA Authors: Schumacher, M.A. Deposit date: 2014-08-08 Release date: 2015-03-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structures of regulatory machinery reveal novel molecular mechanisms controlling B. subtilis nitrogen homeostasis. Genes Dev., 29, 2015

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