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8ESZ
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Structure of mitochondrial complex I from Drosophila melanogaster, Helix-locked state
Descriptor: (2R)-3-{[(S)-hydroxy(3-methylbutoxy)phosphoryl]oxy}-2-(octanoyloxy)propyl decanoate, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Padavannil, A, Letts, J.A.
Deposit date:2022-10-15
Release date:2023-03-29
Last modified:2023-04-05
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Resting mitochondrial complex I from Drosophila melanogaster adopts a helix-locked state.
Elife, 12, 2023
7ZM7
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BU of 7zm7 by Molmil
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (inhibited by DDM)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Laube, E, Kuehlbrandt, W.
Deposit date:2022-04-19
Release date:2022-11-30
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum.
Sci Adv, 8, 2022
7ZMG
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BU of 7zmg by Molmil
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 1)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Laube, E, Kuehlbrandt, W.
Deposit date:2022-04-19
Release date:2022-11-30
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.44 Å)
Cite:Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum.
Sci Adv, 8, 2022
7ZMB
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BU of 7zmb by Molmil
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 2)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Laube, E, Kuehlbrandt, W.
Deposit date:2022-04-19
Release date:2022-11-30
Last modified:2022-12-07
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum.
Sci Adv, 8, 2022
6RFQ
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BU of 6rfq by Molmil
Cryo-EM structure of a respiratory complex I assembly intermediate with NDUFAF2
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), ...
Authors:Parey, K, Vonck, J.
Deposit date:2019-04-16
Release date:2019-12-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease.
Sci Adv, 5, 2019
6RFR
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BU of 6rfr by Molmil
Cryo-EM structure of respiratory complex I from Yarrowia lipolytica at 3.2 A resolution
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), ...
Authors:Parey, K, Vonck, J.
Deposit date:2019-04-16
Release date:2019-12-11
Last modified:2021-06-02
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease.
Sci Adv, 5, 2019
6RP2
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BU of 6rp2 by Molmil
Threonine to Cysteine (T225C) variant of E coli hydrogenase-1
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Carr, S.B, Armstrong, F.A, Zhang, L.
Deposit date:2019-05-13
Release date:2020-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Aerobic Photocatalytic H2Production by a [NiFe] Hydrogenase Engineered to Place a Silver Nanocluster in the Electron Relay.
J.Am.Chem.Soc., 142, 2020
8BEE
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BU of 8bee by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (CI peripheral core)
Descriptor: Acyl carrier protein 2, mitochondrial, IRON/SULFUR CLUSTER, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8BA0
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BU of 8ba0 by Molmil
Drosophila melanogaster complex I in the Twisted state (Dm2)
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Acyl carrier protein, ...
Authors:Agip, A.N.A, Chung, I, Sanchez-Martinez, A, Whitworth, A.J, Hirst, J.
Deposit date:2022-10-10
Release date:2023-01-18
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:Cryo-EM structures of mitochondrial respiratory complex I from Drosophila melanogaster.
Elife, 12, 2023
8BPX
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BU of 8bpx by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete composition)
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (7S)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-11-18
Release date:2023-01-25
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (2.09 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8B9Z
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BU of 8b9z by Molmil
Drosophila melanogaster complex I in the Active state (Dm1)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Agip, A.A, Chung, I, Sanchez-Martinez, A, Whitworth, A.J, Hirst, J.
Deposit date:2022-10-10
Release date:2023-01-18
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Cryo-EM structures of mitochondrial respiratory complex I from Drosophila melanogaster.
Elife, 12, 2023
8BQ6
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BU of 8bq6 by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation 2 composition)
Descriptor: 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, AT3G07480.1, Acyl carrier protein 1, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-11-18
Release date:2023-05-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8BQS
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BU of 8bqs by Molmil
Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Muhleip, A, Kock Flygaard, R, Baradaran, R, Amunts, A.
Deposit date:2022-11-21
Release date:2023-08-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of mitochondrial membrane bending by I-II-III2-IV2 supercomplex
To Be Published
8BQ5
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BU of 8bq5 by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation 1 composition)
Descriptor: 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, AT3G07480.1, Acyl carrier protein 1, ...
Authors:Klusch, N, Kuehlbrandt, W.
Deposit date:2022-11-18
Release date:2023-03-22
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8B6F
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BU of 8b6f by Molmil
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2022-09-27
Release date:2023-03-29
Last modified:2023-04-12
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
6SYO
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BU of 6syo by Molmil
Hydrogenase-2 variant R479K - As Isolated form
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Carr, S.B, Beaton, S.E, Evans, R.M, Armstrong, F.A.
Deposit date:2019-09-30
Release date:2020-10-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Hydrogen activation by NiFe-hydrogenases - consolidating the role of the pendant arginine.
To Be Published
6RUC
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BU of 6ruc by Molmil
THE 3D STRUCTURE OF [NIFESE] HYDROGENASE G491S VARIANT FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH AT 1.20 ANGSTROM RESOLUTION
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE (II) ION, ...
Authors:Matias, P.M, Zacarias, S, Pereita, I.
Deposit date:2019-05-28
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.199 Å)
Cite:A Hydrophilic Channel Is Involved in Oxidative Inactivation of a [NiFeSe] Hydrogenase
Acs Catalysis, 2019
6RU9
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BU of 6ru9 by Molmil
THE 3D STRUCTURE OF [NIFESE] HYDROGENASE G491A VARIANT FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH AT 1.36 ANGSTROM RESOLUTION
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE (II) ION, GLYCEROL, ...
Authors:Matias, P.M, Zacarias, S, Pereita, I.
Deposit date:2019-05-27
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.355 Å)
Cite:A Hydrophilic Channel Is Involved in Oxidative Inactivation of a [NiFeSe] Hydrogenase
Acs Catalysis, 2019
6RFS
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BU of 6rfs by Molmil
Cryo-EM structure of a respiratory complex I mutant lacking NDUFS4
Descriptor: Acyl carrier protein ACPM1 of NADH:Ubiquinone Oxidoreductase (Complex I), Acyl carrier protein ACPM2 of NADH:Ubiquinone Oxidoreductase (Complex I), FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Parey, K, Vonck, J.
Deposit date:2019-04-16
Release date:2019-12-11
Last modified:2019-12-25
Method:ELECTRON MICROSCOPY (4.04 Å)
Cite:High-resolution cryo-EM structures of respiratory complex I: Mechanism, assembly, and disease.
Sci Adv, 5, 2019
6RTP
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BU of 6rtp by Molmil
THE 3D STRUCTURE OF [NIFESE] HYDROGENASE G50T VaRIANT FROM DESULFOVIBRIO VULGARIS HILDENBOROUGH AT 1.10 ANGSTROM RESOLUTION
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE (II) ION, ...
Authors:Matias, P.M, Zacarias, S, Pereita, I.
Deposit date:2019-05-24
Release date:2019-09-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:A Hydrophilic Channel Is Involved in Oxidative Inactivation of a [NiFeSe] Hydrogenase
Acs Catalysis, 2019
4U9I
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BU of 4u9i by Molmil
High Resolution Structure Of The Ni-R State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE3-S4 CLUSTER, ...
Authors:Ogata, H, Nishikawa, K, Lubitz, W.
Deposit date:2014-08-06
Release date:2015-01-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Hydrogens detected by subatomic resolution protein crystallography in a [NiFe] hydrogenase.
Nature, 520, 2015
4U9H
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BU of 4u9h by Molmil
Ultra High Resolution Structure Of The Ni-R State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE3-S4 CLUSTER, ...
Authors:Ogata, H, Nishikawa, K, Lubitz, W.
Deposit date:2014-08-06
Release date:2015-01-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:Hydrogens detected by subatomic resolution protein crystallography in a [NiFe] hydrogenase.
Nature, 520, 2015
4UCW
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BU of 4ucw by Molmil
Structure of the T18V small subunit mutant of D. fructosovorans NiFe- hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Abou-Hamdan, A, Ceccaldi, P, Lebrette, H, Guttierez-Sanz, O, Richaud, P, Cournac, L, Guigliarelli, B, deLacey, A.L, Leger, C, Volbeda, A, Burlat, B, Dementin, S.
Deposit date:2014-12-04
Release date:2015-02-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Threonine Stabilizes the Nic and Nir Catalytic Intermediates of [Nife]-Hydrogenase.
J.Biol.Chem., 290, 2015
4UE2
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BU of 4ue2 by Molmil
Structure of air-treated anaerobically purified D. fructosovorans NiFe-hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-15
Release date:2015-03-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:[Nife]-Hydrogenases Revisited: Nickel-Carboxamido Bond Formation in a Variant with Accrued O2-Tolerance and a Tentative Re-Interpretation of Ni-Si States.
Metallomics, 7, 2015
1UBM
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BU of 1ubm by Molmil
Three-dimensional Structure of The Carbon Monoxide Complex of [NiFe]hydrogenase From Desulufovibrio vulgaris Miyazaki F
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS,S)NICKEL(II)](FE-NI), FE3-S4 CLUSTER, ...
Authors:Ogata, H, Mizoguchi, Y, Mizuno, N, Miki, K, Adachi, S, Yasuoka, N, Yagi, T, Yamauchi, O, Hirota, S, Higuchi, Y.
Deposit date:2003-04-04
Release date:2003-04-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural Studies of the Carbon Monoxide Complex of [NiFe]hydrogenase from Desulfovibrio vulgaris Miyazaki F: Suggestion for the Initial Activation Site for Dihydrogen
J.Am.Chem.Soc., 124, 2002

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