PDB: 2038 resultsInfo pagesStatus searchChemie searchBIRD

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6FPB	Crystal structure of anti-mTFP1 DARPin 1238_G01 in space group I4 Descriptor: CHLORIDE ION, DARPin 1238_G01 Authors: Jakob, R.P, Vigano, M.A, Bieli, D, Matsuda, S, Schaefer, J.V, Pluckthun, A, Affolter, M, Maier, T. Deposit date: 2018-02-09 Release date: 2018-10-03 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.617 Å) Cite: DARPins recognizing mTFP1 as novel reagents forin vitroandin vivoprotein manipulations. Biol Open, 7, 2018
6PFU	rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state in a contracted unit cell Descriptor: Green fluorescent protein, SULFATE ION Authors: Chang, J, Romei, M.G, Boxer, S.G. Deposit date: 2019-06-22 Release date: 2019-08-07 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.619 Å) Cite: Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins. J.Am.Chem.Soc., 141, 2019
6A1U	Charcot-Leyden crystal protein/Galectin-10 variant E33D Descriptor: Galectin-10 Authors: Su, J. Deposit date: 2018-06-08 Release date: 2018-12-26 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.62 Å) Cite: Identification of key amino acid residues determining ligand binding specificity, homodimerization and cellular distribution of human galectin-10 Glycobiology, 29, 2019
4EN1	The 1.62A structure of a FRET-optimized Cerulean Fluorescent Protein Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Watkins, J.L. Deposit date: 2012-04-12 Release date: 2013-04-24 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.62 Å) Cite: The 1.6 A resolution structure of a FRET-optimized Cerulean fluorescent protein. Acta Crystallogr.,Sect.D, 69, 2013
8I4J	Structure of wild-type Azami Green from Galaxea fascicularis Descriptor: Azami-Green Authors: Otsubo, S, Takekawa, N, Imamura, H, Imada, K. Deposit date: 2023-01-19 Release date: 2023-11-01 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.62 Å) Cite: Red fluorescent proteins engineered from green fluorescent proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
6DEJ	The structure of HcRed7, a brighter and red-shifted HcRed variant Descriptor: CHLORIDE ION, DODECAETHYLENE GLYCOL, GFP-like non-fluorescent chromoprotein, ... Authors: Wannier, T.M, Mayo, S.L. Deposit date: 2018-05-12 Release date: 2018-05-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.6279 Å) Cite: Monomerization of far-red fluorescent proteins. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3SSP	Engineered low-affinity halide-binding protein derived from YFP: halide-free Descriptor: Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.628 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
7UGS	Crystal structure of monomeric hyperfolder YFP (K206V mutant) Descriptor: Hyperfolder yellow fluorescent protein Authors: Campbell, B.C, Liu, C.F, Petsko, G.A. Deposit date: 2022-03-25 Release date: 2022-10-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Chemically stable fluorescent proteins for advanced microscopy. Nat.Methods, 19, 2022
6A64	Placental protein 13/galectin-13 variant R53HR55NH57RD33G with Lactose Descriptor: Galactoside-binding soluble lectin 13, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose Authors: Su, J. Deposit date: 2018-06-26 Release date: 2018-12-26 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Resetting the ligand binding site of placental protein 13/galectin-13 recovers its ability to bind lactose Biosci. Rep., 38, 2018
1AKY	HIGH-RESOLUTION STRUCTURES OF ADENYLATE KINASE FROM YEAST LIGATED WITH INHIBITOR AP5A, SHOWING THE PATHWAY OF PHOSPHORYL TRANSFER Descriptor: ADENYLATE KINASE, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, IMIDAZOLE Authors: Abele, U, Schulz, G.E. Deposit date: 1995-07-28 Release date: 1995-11-14 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: High-resolution structures of adenylate kinase from yeast ligated with inhibitor Ap5A, showing the pathway of phosphoryl transfer. Protein Sci., 4, 1995
4JZK	Crystal Structure of Adenylate kinase of E. Coli with ADP/AMP bound Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase Authors: Cho, Y.-J, Agafonov, R, Kern, D. Deposit date: 2013-04-03 Release date: 2014-04-30 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Crystal structure of E. Coli Adenylate kinase with ADP and AMP bound To be Published
6A1S	Charcot-Leyden crystal protein/Galectin-10 variant E33A Descriptor: Galectin-10 Authors: Su, J. Deposit date: 2018-06-08 Release date: 2018-12-26 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Identification of key amino acid residues determining ligand binding specificity, homodimerization and cellular distribution of human galectin-10 Glycobiology, 29, 2019
6A63	Placental protein 13/galectin-13 variant R53HH57R with Lactose Descriptor: Galactoside-binding soluble lectin 13, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose Authors: Su, J. Deposit date: 2018-06-26 Release date: 2018-12-26 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Resetting the ligand binding site of placental protein 13/galectin-13 recovers its ability to bind lactose Biosci. Rep., 38, 2018
7AMF	Crystal structure of rsFolder2 in its non-fluorescent off-state Descriptor: GLYCEROL, Green fluorescent protein Authors: Moreno-Chicano, T, El Khatib, M, Colletier, J.-P. Deposit date: 2020-10-08 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement. Chemphyschem, 23, 2022
7AMB	Crystal structure of rsFolder2 in its fluorescent on-state Descriptor: GLYCEROL, Green fluorescent protein Authors: Moreno-Chicano, T, El Khatib, M, Colletier, J.-P. Deposit date: 2020-10-08 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement. Chemphyschem, 23, 2022
6A1Y	Charcot-Leyden crystal protein/Galectin-10 variant Y35A Descriptor: Galectin-10 Authors: Su, J. Deposit date: 2018-06-08 Release date: 2018-12-26 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Identification of key amino acid residues determining ligand binding specificity, homodimerization and cellular distribution of human galectin-10 Glycobiology, 29, 2019
8A6O	Room temperature rsEGFP2 with a chlorinated chromophore 600 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6S	Room temperature rsEGFP2 with a chlorinated chromophore 1 microsecond after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-19 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6N	Room temperature rsEGFP2 with a chlorinated chromophore 300 fs after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6R	Room temperature rsEGFP2 with a chlorinated chromophore 100 ps after Photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6G	Room temperature rsEGFP2 with a chlorinated chromophore in the non-fluorescent OFF-state Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-17 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6P	Room temperature rsEGFP2 with a chlorinated chromophore 900 fs after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
8A6Q	Room temperature rsEGFP2 with a chlorinated chromophore 5 ps after photoexcitation Descriptor: Green fluorescent protein Authors: Fadini, A, van Thor, J. Deposit date: 2022-06-18 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
2YE1	X-ray structure of the cyan fluorescent proteinmTurquoise-GL (K206A mutant) Descriptor: GREEN FLUORESCENT PROTEIN, MAGNESIUM ION Authors: von Stetten, D, Noirclerc-Savoye, M, Goedhart, J, Gadella, T.W.J, Royant, A. Deposit date: 2011-03-25 Release date: 2012-04-11 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Structural Characterization of the Cyan Fluorescent Protein Mturquoise-Gl To be Published
3IR8	Red fluorescent protein mKeima at pH 7.0 Descriptor: Large stokes shift fluorescent protein Authors: Henderson, J.N, Osborn, M.F, Koon, N, Gepshtein, R, Huppert, D, Remington, S.J. Deposit date: 2009-08-21 Release date: 2009-09-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Excited state proton transfer in the red fluorescent protein mKeima. J.Am.Chem.Soc., 131, 2009

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