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PDB: 201 results

4Z5C
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BU of 4z5c by Molmil
HipB-O3 21mer complex
Descriptor: Antitoxin HipB, DNA (5'-D(*TP*TP*TP*AP*TP*CP*CP*CP*GP*TP*AP*GP*AP*GP*CP*GP*GP*AP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*TP*AP*CP*GP*GP*GP*AP*TP*A)-3')
Authors:Min, J, Brennan, R.G, Schumacher, M.A.
Deposit date:2015-04-02
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular mechanism on hipBA gene regulation.
To be published
4Z59
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HipB-O4 20mer complex
Descriptor: Antitoxin HipB, DNA (5'-D(*TP*TP*AP*TP*CP*CP*GP*CP*GP*AP*TP*CP*GP*CP*GP*GP*AP*TP*AP*A)-3')
Authors:Min, J, Brennan, R.G, Schumacher, M.A.
Deposit date:2015-04-02
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular mechanism on hipBA gene regulation.
To be published
5A7L
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BU of 5a7l by Molmil
TP901-1 CI NTD (res 1-80)
Descriptor: CI
Authors:Frandsen, K.E.H, Rasmussen, K.K, Lo Leggio, L.
Deposit date:2015-07-08
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.103 Å)
Cite:Structural and Dynamics Studies of a Truncated Variant of Ci Repressor from Bacteriophage Tp901-1.
Sci.Rep., 6, 2016
1RPE
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BU of 1rpe by Molmil
THE PHAGE 434 OR2/R1-69 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*AP*CP*AP*AP*AP*CP*AP*AP*GP*AP*TP*AP*CP*AP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*TP*GP*TP*AP*TP*CP*TP*TP*GP*T P*TP*TP*G)-3'), PROTEIN (434 REPRESSOR)
Authors:Shimon, L.J.W, Harrison, S.C.
Deposit date:1993-03-24
Release date:1994-01-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The phage 434 OR2/R1-69 complex at 2.5 A resolution.
J.Mol.Biol., 232, 1993
1R63
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BU of 1r63 by Molmil
STRUCTURAL ROLE OF A BURIED SALT BRIDGE IN THE 434 REPRESSOR DNA-BINDING DOMAIN, NMR, 20 STRUCTURES
Descriptor: REPRESSOR PROTEIN FROM BACTERIOPHAGE 434
Authors:Pervushin, K.V, Billeter, M, Siegal, G, Wuthrich, K.
Deposit date:1996-11-08
Release date:1997-06-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural role of a buried salt bridge in the 434 repressor DNA-binding domain.
J.Mol.Biol., 264, 1996
3CRO
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BU of 3cro by Molmil
THE PHAGE 434 CRO/OR1 COMPLEX AT 2.5 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*AP*AP*CP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*GP*TP*TP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 CRO)
Authors:Mondragon, A, Harrison, S.C.
Deposit date:1990-07-06
Release date:1991-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The phage 434 Cro/OR1 complex at 2.5 A resolution.
J.Mol.Biol., 219, 1991
3FYA
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BU of 3fya by Molmil
Crystal Structure of an R35A mutant of the Restriction-Modification Controller Protein C.Esp1396I
Descriptor: Regulatory protein
Authors:Ball, N.J, McGeehan, J.E, Thresh, S.J, Streeter, S.D, Kneale, G.G.
Deposit date:2009-01-22
Release date:2009-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the restriction-modification controller protein C.Esp1396I.
Acta Crystallogr.,Sect.D, 65, 2009
6CF1
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BU of 6cf1 by Molmil
Proteus vulgaris HigA antitoxin structure
Descriptor: Antitoxin HigA, POTASSIUM ION
Authors:Schureck, M.A, Hoffer, E.D, Ei Cho, S, Dunham, C.M.
Deposit date:2018-02-13
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis of transcriptional regulation by the HigA antitoxin.
Mol.Microbiol., 111, 2019
6CHV
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BU of 6chv by Molmil
Proteus vulgaris HigA antitoxin bound to DNA
Descriptor: Antitoxin HigA, MAGNESIUM ION, pHigCryst3, ...
Authors:Schureck, M.A, Hoffer, E.D, Onuoha, N, Dunham, C.M.
Deposit date:2018-02-23
Release date:2019-02-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of transcriptional regulation by the HigA antitoxin.
Mol.Microbiol., 111, 2019
3G5G
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BU of 3g5g by Molmil
Crystal Structure of the Wild-Type Restriction-Modification Controller Protein C.Esp1396I
Descriptor: Regulatory protein
Authors:Ball, N.J, McGeehan, J.E, Thresh, S.J, Streeter, S.D, Kneale, G.G.
Deposit date:2009-02-05
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the restriction-modification controller protein C.Esp1396I.
Acta Crystallogr.,Sect.D, 65, 2009
1SQ8
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BU of 1sq8 by Molmil
a variant 434 repressor DNA binding domain devoid of hydroxyl groups, NMR, 20 STRUCTURES
Descriptor: dh434
Authors:Iwai, H, Wider, G, Wuthrich, K.
Deposit date:2004-03-18
Release date:2004-07-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR Structure of a Variant 434 Repressor DNA-binding Domain Devoid of Hydroxyl Groups
J.Biomol.Nmr, 29, 2004
1UTX
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BU of 1utx by Molmil
Regulation of Cytolysin Expression by Enterococcus faecalis: Role of CylR2
Descriptor: CYLR2, IODIDE ION, SODIUM ION
Authors:Razeto, A, Rumpel, S, Pillar, C.M, Gilmore, M.S, Becker, S, Zweckstetter, M.
Deposit date:2003-12-12
Release date:2004-09-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and DNA-Binding Properties of the Cytolysin Regulator CylR2 from Enterococcus Faecalis
Embo J., 23, 2004
3CLC
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BU of 3clc by Molmil
Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator
Descriptor: 35-MER, MAGNESIUM ION, Regulatory protein
Authors:McGeehan, J.E, Streeter, S.D, Thresh, S.J, Ball, N, Ravelli, R.B, Kneale, G.G.
Deposit date:2008-03-18
Release date:2008-07-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural analysis of the genetic switch that regulates the expression of restriction-modification genes.
Nucleic Acids Res., 36, 2008
3EUS
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BU of 3eus by Molmil
The crystal structure of the DNA binding protein from Silicibacter pomeroyi
Descriptor: DNA-binding protein
Authors:Zhang, R, Li, H, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-10-10
Release date:2008-11-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the DNA binding protein from Silicibacter pomeroyi
To be Published
7CSW
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BU of 7csw by Molmil
Pseudomonas aeruginosa antitoxin HigA with pa2440 promoter
Descriptor: HTH cro/C1-type domain-containing protein, pa2440
Authors:Song, Y.J, Luo, G.H, Bao, R.
Deposit date:2020-08-17
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Pseudomonas aeruginosa antitoxin HigA functions as a diverse regulatory factor by recognizing specific pseudopalindromic DNA motifs.
Environ.Microbiol., 23, 2021
7CSV
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BU of 7csv by Molmil
Pseudomonas aeruginosa antitoxin HigA
Descriptor: HTH cro/C1-type domain-containing protein
Authors:Song, Y.J, Luo, G.H, Bao, R.
Deposit date:2020-08-17
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Pseudomonas aeruginosa antitoxin HigA functions as a diverse regulatory factor by recognizing specific pseudopalindromic DNA motifs.
Environ.Microbiol., 23, 2021
7CSY
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BU of 7csy by Molmil
Pseudomonas aeruginosa antitoxin HigA with higBA promoter
Descriptor: DNA (28-MER), DNA (29-MER), HTH cro/C1-type domain-containing protein, ...
Authors:Song, Y.J, Luo, G.H, Bao, R.
Deposit date:2020-08-17
Release date:2021-01-13
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Pseudomonas aeruginosa antitoxin HigA functions as a diverse regulatory factor by recognizing specific pseudopalindromic DNA motifs.
Environ.Microbiol., 23, 2021
3QQ6
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BU of 3qq6 by Molmil
The N-terminal DNA binding domain of SinR from Bacillus subtilis
Descriptor: HTH-type transcriptional regulator sinR
Authors:Colledge, V, Fogg, M.J, Levdikov, V.M, Dodson, E.J, Wilkinson, A.J.
Deposit date:2011-02-15
Release date:2011-06-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Organisation of SinR, the Master Regulator of Biofilm Formation in Bacillus subtilis.
J.Mol.Biol., 411, 2011
3S8Q
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BU of 3s8q by Molmil
Crystal structure of the R-M controller protein C.Esp1396I OL operator complex
Descriptor: DNA (5'-D(*AP*TP*GP*TP*GP*AP*CP*TP*TP*AP*TP*AP*GP*TP*CP*CP*GP*TP*G)-3'), DNA (5'-D(*TP*CP*AP*CP*GP*GP*AP*CP*TP*AP*TP*AP*AP*GP*TP*CP*AP*CP*A)-3'), R-M CONTROLLER PROTEIN
Authors:McGeehan, J.E, Ball, N.J, Streeter, S.D, Thresh, S.-J, Kneale, G.G.
Deposit date:2011-05-30
Release date:2012-01-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.
Nucleic Acids Res., 40, 2012
3JXC
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BU of 3jxc by Molmil
Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9T in the presence of Tl+
Descriptor: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2, THALLIUM (I) ION
Authors:Watkins, D, Koudelka, G.B, Williams, L.D.
Deposit date:2009-09-18
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Sequence Recognition of DNA by Protein-Induced Conformational Transitions.
J.Mol.Biol., 396, 2010
3JXD
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BU of 3jxd by Molmil
Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C in the presence of Rb+
Descriptor: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', RUBIDIUM ION, Repressor protein C2
Authors:Watkins, D, Koudelka, G.B, Williams, L.D.
Deposit date:2009-09-18
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Sequence Recognition of DNA by Protein-Induced Conformational Transitions.
J.Mol.Biol., 396, 2010
3JXB
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BU of 3jxb by Molmil
Crystal structure of the P22 c2 repressor protein in complex with synthetic operator 9C
Descriptor: 5'-D(*CP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*A)-3', 5'-D(*TP*AP*TP*TP*TP*AP*AP*GP*AP*CP*GP*TP*CP*TP*TP*AP*AP*AP*TP*G)-3', Repressor protein C2
Authors:Watkins, D, Koudelka, G.B, Williams, L.D.
Deposit date:2009-09-18
Release date:2010-01-19
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Sequence Recognition of DNA by Protein-Induced Conformational Transitions
J.Mol.Biol., 396, 2010
3KZ3
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A structure of a lambda repressor fragment mutant
Descriptor: Repressor protein CI
Authors:Gruebele, M, Liu, F, Gao, Y.
Deposit date:2009-12-07
Release date:2010-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A survey of lambda repressor fragments from two-state to downhill folding.
J.Mol.Biol., 397, 2010
3KXA
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BU of 3kxa by Molmil
Crystal Structure of NGO0477 from Neisseria gonorrhoeae
Descriptor: ASPARAGINE, CHLORIDE ION, Putative uncharacterized protein, ...
Authors:Ren, J, Sainsbury, S, Nettleship, J.E, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2009-12-02
Release date:2010-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif.
Proteins, 78, 2010
7EWE
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BU of 7ewe by Molmil
Mycobacterium tuberculosis HigA2 (Form III)
Descriptor: Putative antitoxin HigA2
Authors:Kim, H.J.
Deposit date:2021-05-25
Release date:2022-03-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Chasing the structural diversity of the transcription regulator Mycobacterium tuberculosis HigA2.
Iucrj, 8, 2021

222415

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