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PDB: 91 results

1MIO
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BU of 1mio by Molmil
X-RAY CRYSTAL STRUCTURE OF THE NITROGENASE MOLYBDENUM-IRON PROTEIN FROM CLOSTRIDIUM PASTEURIANUM AT 3.0 ANGSTROMS RESOLUTION
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE-MO-S CLUSTER, ...
Authors:Kim, J, Woo, D, Rees, D.C.
Deposit date:1993-03-24
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray crystal structure of the nitrogenase molybdenum-iron protein from Clostridium pasteurianum at 3.0-A resolution.
Biochemistry, 32, 1993
3PDI
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BU of 3pdi by Molmil
Precursor bound NifEN
Descriptor: IRON/SULFUR CLUSTER, L-Cluster (Fe8S9), Nitrogenase MoFe cofactor biosynthesis protein NifE, ...
Authors:Kaiser, J.T, Hu, Y, Wiig, J.A, Rees, D.C, Ribbe, M.W.
Deposit date:2010-10-22
Release date:2011-01-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Precursor-Bound NifEN: A Nitrogenase FeMo Cofactor Maturase/Insertase.
Science, 331, 2011
5VQ3
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BU of 5vq3 by Molmil
Nitrogenase Cp1 at pH 6.5
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (II) ION, FE(8)-S(7) CLUSTER, ...
Authors:Morrison, C.N, Spatzal, T, Rees, D.C.
Deposit date:2017-05-07
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Reversible Protonated Resting State of the Nitrogenase Active Site.
J. Am. Chem. Soc., 139, 2017
8PBB
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BU of 8pbb by Molmil
CHAPSO treated partial catalytic component (comprising only AnfD & AnfK, lacking AnfG and FeFeco) of iron nitrogenase from Rhodobacter capsulatus
Descriptor: FE(8)-S(7) CLUSTER, Nitrogenase iron-iron protein, beta subunit, ...
Authors:Schmidt, F.V, Schulz, L, Zarzycki, J, Prinz, S, Erb, T.J, Rebelein, J.G.
Deposit date:2023-06-09
Release date:2023-10-04
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Structural insights into the iron nitrogenase complex.
Nat.Struct.Mol.Biol., 31, 2024
5VPW
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BU of 5vpw by Molmil
Nitrogenase Cp1 at pH 5
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (II) ION, FE(8)-S(7) CLUSTER, ...
Authors:Morrison, C.N, Spatzal, T, Rees, D.C.
Deposit date:2017-05-05
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reversible Protonated Resting State of the Nitrogenase Active Site.
J. Am. Chem. Soc., 139, 2017
4WES
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BU of 4wes by Molmil
Nitrogenase molybdenum-iron protein from Clostridium pasteurianum at 1.08 A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (II) ION, ...
Authors:Zhang, L.M, Morrison, C.N, Kaiser, J.T, Rees, D.C.
Deposit date:2014-09-10
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Nitrogenase MoFe protein from Clostridium pasteurianum at 1.08 angstrom resolution: comparison with the Azotobacter vinelandii MoFe protein.
Acta Crystallogr.,Sect.D, 71, 2015
4WN9
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BU of 4wn9 by Molmil
Structure of the Nitrogenase MoFe Protein from Clostridium pasteurianum Pressurized with Xenon
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Morrison, C.N, Hoy, J.A, Rees, D.C.
Deposit date:2014-10-11
Release date:2015-03-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Substrate Pathways in the Nitrogenase MoFe Protein by Experimental Identification of Small Molecule Binding Sites.
Biochemistry, 54, 2015
1FP4
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BU of 1fp4 by Molmil
CRYSTAL STRUCTURE OF THE ALPHA-H195Q MUTANT OF NITROGENASE
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE-MO-S CLUSTER, ...
Authors:Sorlie, M, Christiansen, J, Lemon, B.J, Peters, J.W, Dean, D.R, Hales, B.J.
Deposit date:2000-08-30
Release date:2002-11-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanistic features and structure of the nitrogenase alpha-Gln195 MoFe protein
Biochemistry, 40, 2001
3U7Q
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BU of 3u7q by Molmil
A. vinelandii nitrogenase MoFe protein at atomic resolution
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(8)-S(7) CLUSTER, ...
Authors:Spatzal, T, Einsle, O.
Deposit date:2011-10-14
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1 Å)
Cite:Evidence for interstitial carbon in nitrogenase FeMo cofactor.
Science, 334, 2011
8CRS
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BU of 8crs by Molmil
CryoEM Structure of nitrogenase MoFe-protein in detergent
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CHAPSO, FE (III) ION, ...
Authors:Warmack, R.A, Rees, D.C.
Deposit date:2022-05-11
Release date:2023-03-08
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.04 Å)
Cite:Structural consequences of turnover-induced homocitrate loss in nitrogenase.
Nat Commun, 14, 2023
4XPI
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BU of 4xpi by Molmil
Fe protein independent substrate reduction by nitrogenase variants altered in intramolecular electron transfer
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, ...
Authors:Danyal, K, Rasmusen, A.J, Keable, S.M, Shaw, S, Zadvornyy, O, Duval, S, Dean, D.R, Raugei, S, Peters, J.W, Seefeldt, L.C.
Deposit date:2015-01-17
Release date:2015-10-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Fe protein-independent substrate reduction by nitrogenase MoFe protein variants.
Biochemistry, 54, 2015
4ND8
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BU of 4nd8 by Molmil
Av Nitrogenase MoFe Protein High pH Form
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Yang, K.-Y, Haynes, C.A, Spatzal, T, Rees, D.C, Howard, J.B.
Deposit date:2013-10-25
Release date:2014-01-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Turnover-Dependent Inactivation of the Nitrogenase MoFe-Protein at High pH.
Biochemistry, 53, 2014
5N6Y
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BU of 5n6y by Molmil
Azotobacter vinelandii vanadium nitrogenase
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, C Fe7 S8 V, CARBONATE ION, ...
Authors:Sippel, D, Einsle, O.
Deposit date:2017-02-16
Release date:2017-07-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The structure of vanadium nitrogenase reveals an unusual bridging ligand.
Nat. Chem. Biol., 13, 2017
6FEA
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BU of 6fea by Molmil
A. vinelandii vanadium nitrogenase, turnover state
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CARBONATE ION, FE(8)-S(7) CLUSTER, ...
Authors:Sippel, D, Einsle, O.
Deposit date:2017-12-31
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A bound reaction intermediate sheds light on the mechanism of nitrogenase.
Science, 359, 2018
7MCI
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BU of 7mci by Molmil
MoFe protein from Azotobacter vinelandii with a sulfur-replenished cofactor
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(8)-S(7) CLUSTER, ...
Authors:Kang, W, Lee, C, Hu, Y, Ribbe, M.W.
Deposit date:2021-04-02
Release date:2022-05-18
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Evidence of substrate binding and product release via belt-sulfur mobilization of the nitrogenase cofactor
Nat Catal, 5, 2022
2MIN
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BU of 2min by Molmil
NITROGENASE MOFE PROTEIN FROM AZOTOBACTER VINELANDII, OXIDIZED STATE
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(8)-S(7) CLUSTER, ...
Authors:Peters, J.W, Stowell, M.H.B, Soltis, S.M, Day, M.W, Kim, J, Rees, D.C.
Deposit date:1996-12-20
Release date:1997-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Redox-dependent structural changes in the nitrogenase P-cluster.
Biochemistry, 36, 1997
7JRF
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BU of 7jrf by Molmil
CO-CO-BOUND NITROGENASE MOFE-PROTEIN FROM A. VINELANDII
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, CARBON MONOXIDE, ...
Authors:Spatzal, T, Perez, K.A, Buscagan, T.M, Maggiolo, A.O, Rees, D.C.
Deposit date:2020-08-12
Release date:2021-03-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Structural Characterization of Two CO Molecules Bound to the Nitrogenase Active Site.
Angew.Chem.Int.Ed.Engl., 60, 2021
6VXT
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BU of 6vxt by Molmil
Activated Nitrogenase MoFe-protein from Azotobacter vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Kang, W, Hu, Y, Ribbe, M.W.
Deposit date:2020-02-24
Release date:2020-06-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Structural evidence for a dynamic metallocofactor during N2reduction by Mo-nitrogenase.
Science, 368, 2020
3K1A
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BU of 3k1a by Molmil
Insights into substrate binding at FeMo-cofactor in nitrogenase from the structure of an alpha-70Ile MoFe protein variant
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CALCIUM ION, FE(7)-MO-S(9)-N CLUSTER, ...
Authors:Peters, J.W, Sarma, R, Barney, B.M, Keable, S, Seefeldt, L.C, Dean, D.R.
Deposit date:2009-09-26
Release date:2010-02-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Insights into substrate binding at FeMo-cofactor in nitrogenase from the structure of an alpha-70(Ile) MoFe protein variant
J.Inorg.Biochem., 104, 2010
6UG0
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BU of 6ug0 by Molmil
N2-bound Nitrogenase MoFe-protein from Azotobacter vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Kang, W, Hu, Y, Ribbe, M.W.
Deposit date:2019-09-25
Release date:2020-06-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural evidence for a dynamic metallocofactor during N2reduction by Mo-nitrogenase.
Science, 368, 2020
2XDQ
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BU of 2xdq by Molmil
Dark Operative Protochlorophyllide Oxidoreductase (ChlN-ChlB)2 Complex
Descriptor: 1-METHYLGUANIDINE, IRON/SULFUR CLUSTER, LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE SUBUNIT B, ...
Authors:Broecker, M.J, Schomburg, S, Heinz, D.W, Jahn, D, Schubert, W.-D, Moser, J.
Deposit date:2010-05-06
Release date:2010-06-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Nitrogenase-Like Dark Operative Protochlorophyllide Oxidoreductase Catalytic Complex (Chln/Chlb)2.
J.Biol.Chem., 285, 2010
4TKU
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BU of 4tku by Molmil
Reactivated Nitrogenase MoFe-protein from A. vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CHLORIDE ION, FE (II) ION, ...
Authors:Spatzal, T, Perez, K, Einsle, O, Howard, J.B, Rees, D.C.
Deposit date:2014-05-27
Release date:2014-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.
Science, 345, 2014
4TKV
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BU of 4tkv by Molmil
CO-bound Nitrogenase MoFe-protein from A. vinelandii
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, CARBON MONOXIDE, FE (II) ION, ...
Authors:Spatzal, T, Perez, K, Einsle, O, Howard, J.B, Rees, D.C.
Deposit date:2014-05-28
Release date:2014-10-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ligand binding to the FeMo-cofactor: structures of CO-bound and reactivated nitrogenase.
Science, 345, 2014
6BBL
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BU of 6bbl by Molmil
Crystal structure of the a-96Gln MoFe protein variant in the presence of the substrate acetylene
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Zadvornyy, O.A, Keable, S.M, Vertemara, J, Eilers, B.J, Karamatullah, D, Rasmussen, A.J, De Gioia, L, Zampella, G, Seefeldt, L.C, Peters, J.W.
Deposit date:2017-10-18
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural characterization of the nitrogenase molybdenum-iron protein with the substrate acetylene trapped near the active site.
J. Inorg. Biochem., 180, 2017
5KOJ
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BU of 5koj by Molmil
Nitrogenase MoFeP protein in the IDS oxidized state
Descriptor: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
Authors:Owens, C.P, Tezcan, F.A.
Deposit date:2016-06-30
Release date:2016-09-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.592 Å)
Cite:Tyrosine-Coordinated P-Cluster in G. diazotrophicus Nitrogenase: Evidence for the Importance of O-Based Ligands in Conformationally Gated Electron Transfer.
J.Am.Chem.Soc., 138, 2016

 

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