PDB: 284 件ウェブページステータス検索Chemie searchBIRD

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6MQJ	Crystal Structure of the All-Trans Retinal bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Q mutant of Human Cellular Retinoic Acid Binding Protein II Irradiated with 532 nm Laser for 10 minutes at 2.1 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-09 公開日 2019-01-09 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.125 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MOQ	Crystal Structure of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121W Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 2.2 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-04 公開日 2019-01-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.198 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MOP	Crystal Structure of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.9 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-04 公開日 2019-01-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MPK	Crystal Structure of the 13-cis Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E:A32Y Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.58 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, GLYCEROL, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-07 公開日 2019-01-09 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MQY	Crystal Structure of the 13-cis Product of All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm Laser (30 seconds) at 1.9 Angstrom 分子名称: Cellular retinoic acid-binding protein 2, GLYCEROL, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-11 公開日 2019-01-09 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MOV	Crystal Structure of the All-trans Retinal bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Q Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.75 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-04 公開日 2019-01-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.752 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MR0	Crystal Structure of the All-trans Retinal Bound R111K:Y134F:T54V:R132Q:P39Q:R59Y:L121E Human Cellular Retinoic Acid Binding Protein II Mutant After 5 Minutes UV irradiation at 2.6 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-11 公開日 2019-01-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.649 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MOX	Crystal Structure of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Q:R59Y:L121E Human Cellular Retinoic Acid Binding Protein II Mutant in the Dark at 2.18 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-04 公開日 2019-01-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MOR	Crystal Structure of the All-Trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Y Mutant of Human Cellular Retinoic Acid Binding Protein II in the Dark at 1.79 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-04 公開日 2019-01-09 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MQW	Crystal Structure of All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm laser (30 seconds) and subsequently dark adapted (10 minutes) at 2.1 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-11 公開日 2019-01-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MQI	Crystal Structure of the All-trans Retinal bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121Q mutant of Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm Laser for 5 minutes at 1.87 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-09 公開日 2019-01-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MQZ	Crystal Structure of the 13-cis Product of the All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Mutant of Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm Laser (5 minutes) at 2.07 Angstrom 分子名称: Cellular retinoic acid-binding protein 2, GLYCEROL, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-11 公開日 2019-01-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
6MQX	Crystal Structure of All-trans Retinal-Bound R111K:Y134F:T54V:R132Q:P39Y:R59Y:L121E Human Cellular Retinoic Acid Binding Protein II Irradiated with 400 nm Laser (30 seconds) and Subsequently Dark Adapted (25 minutes) at 2.0 Angstrom Resolution 分子名称: Cellular retinoic acid-binding protein 2, GLYCEROL, RETINAL 著者 Ghanbarpour, A, Geiger, J. 登録日 2018-10-11 公開日 2019-01-09 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.01 Å) 主引用文献 Mimicking Microbial Rhodopsin Isomerization in a Single Crystal. J. Am. Chem. Soc., 141, 2019
1E12	Halorhodopsin, a light-driven chloride pump 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHLORIDE ION, HALORHODOPSIN, ... 著者 Essen, L.-O, Kolbe, M, Oesterhelt, D. 登録日 2000-04-14 公開日 2000-06-02 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of Light-Driven Chloride Pump Halorhodopsin at 1.8 A Resolution Science, 288, 2000
2EI4	Trimeric complex of archaerhodopsin-2 分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Archaerhodopsin-2, BACTERIORUBERIN, ... 著者 Kouyama, T. 登録日 2007-03-11 公開日 2008-01-01 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural role of bacterioruberin in the trimeric structure of archaerhodopsin-2 J.Mol.Biol., 375, 2008
7BMH	Crystal structure of a light-driven proton pump LR (Mac) from Leptosphaeria maculans 分子名称: EICOSANE, OLEIC ACID, Opsin 著者 Kovalev, K, Zabelskii, D, Dmitrieva, N, Volkov, O, Shevchenko, V, Astashkin, R, Zinovev, E, Gordeliy, V. 登録日 2021-01-20 公開日 2021-07-07 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure-based insights into evolution of rhodopsins. Commun Biol, 4, 2021
3DDL	Crystallographic Structure of Xanthorhodopsin, a Light-Driven Ion Pump with Dual Chromophore 分子名称: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, RETINAL, ... 著者 Stagno, J, Luecke, H, Schobert, B, Lanyi, J.K, Imasheva, E.S, Wang, J.M, Balashov, S.P. 登録日 2008-06-05 公開日 2008-10-14 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystallographic structure of xanthorhodopsin, the light-driven proton pump with a dual chromophore. Proc.Natl.Acad.Sci.USA, 105, 2008
1H68	sensory rhodopsin II 分子名称: CHLORIDE ION, RETINAL, SENSORY RHODOPSIN II 著者 Royant, A, Nollert, P, Edman, K, Neutze, R, Landau, E.M, Pebay-Peyroula, E, Navarro, J. 登録日 2001-06-08 公開日 2001-08-28 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 X-Ray Structure of Sensory Rhodopsin II at 2.1 A Resolution Proc.Natl.Acad.Sci.USA, 98, 2001
6LM0	The crystal structure of cyanorhodopsin (CyR) N2098R from cyanobacteria Calothrix sp. NIES-2098 分子名称: DECANE, HEXANE, N-OCTANE, ... 著者 Hosaka, T, Kimura-Someya, T, Shirouzu, M. 登録日 2019-12-24 公開日 2020-10-21 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage. Sci Rep, 10, 2020
6LM1	The crystal structure of cyanorhodopsin (CyR) N4075R from cyanobacteria Tolypothrix sp. NIES-4075 分子名称: DECANE, DODECANE, HEXADECANE, ... 著者 Hosaka, T, Kimura-Someya, T, Shirouzu, M. 登録日 2019-12-24 公開日 2020-10-21 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage. Sci Rep, 10, 2020
7SFK	ChRmine in MSP1E3D1 lipid nanodisc 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ChRmine, RETINAL 著者 Tucker, K, Brohawn, S. 登録日 2021-10-04 公開日 2021-12-01 最終更新日 2022-08-31 実験手法 ELECTRON MICROSCOPY (2.74 Å) 主引用文献 Cryo-EM structures of the channelrhodopsin ChRmine in lipid nanodiscs. Nat Commun, 13, 2022
7SFJ	ChRmine in MSP1E3D1 lipid nanodisc 分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ChRmine, RETINAL 著者 Tucker, K, Brohawn, S. 登録日 2021-10-04 公開日 2021-12-01 最終更新日 2022-08-31 実験手法 ELECTRON MICROSCOPY (2.74 Å) 主引用文献 Cryo-EM structures of the channelrhodopsin ChRmine in lipid nanodiscs. Nat Commun, 13, 2022
7SHS	Apo-ChRmine in MSP1E3D1 lipid nanodisc 分子名称: ChRmine 著者 Tucker, K, Brohawn, S. 登録日 2021-10-11 公開日 2021-12-01 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (4.1 Å) 主引用文献 Cryo-EM structures of the channelrhodopsin ChRmine in lipid nanodiscs. Nat Commun, 13, 2022
6KFQ	Crystal structure of thermophilic rhodopsin from Rubrobacter xylanophilus 分子名称: RETINAL, Rhodopsin, SULFATE ION, ... 著者 Suzuki, K, Akiyama, T, Hayashi, T, Yasuda, S, Kanehara, K, Kojima, K, Tanabe, M, Kato, R, Senda, T, Sudo, Y, Kinoshita, M, Murata, T. 登録日 2019-07-08 公開日 2020-04-08 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 How Does a Microbial Rhodopsin RxR Realize Its Exceptionally High Thermostability with the Proton-Pumping Function Being Retained? J.Phys.Chem.B, 124, 2020
3WQJ	Crystal structure of archaerhodopsin-2 at 1.8 angstrom resolution 分子名称: (6E,10E,14E,18E)-2,6,10,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaene, 2,3-DI-O-PHYTANLY-3-SN-GLYCERO-1-PHOSPHORYL-3'-SN-GLYCEROL-1'-PHOSPHATE, 2,3-DI-PHYTANYL-GLYCEROL, ... 著者 Kouyama, T. 登録日 2014-01-27 公開日 2014-10-15 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of archaerhodopsin-2 at 1.8 angstrom resolution. Acta Crystallogr.,Sect.D, 70, 2014

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