Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8CMO
DownloadVisualize
BU of 8cmo by Molmil
Cryo-EM structure of the Photosystem I - LHCI supercomplex from Coelastrella sp.
分子名称: (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate, (2S)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-hydroxypropyl hexadecanoate, ...
著者Fadeeva, M, Klaiman, D, Nelson, N.
登録日2023-02-20
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Cryo-EM structure of the Photosystem I - LHCI supercomplex from Coelastrella sp.
To Be Published
8QSJ
DownloadVisualize
BU of 8qsj by Molmil
Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7
分子名称: 16S rRNA, 39S ribosomal protein L10, mitochondrial, ...
著者Ritter, C, Nguyen, T.G, Kummer, E.
登録日2023-10-10
公開日2023-12-13
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the role of GTPBP10 in the RNA maturation of the mitoribosome.
Nat Commun, 14, 2023
8A22
DownloadVisualize
BU of 8a22 by Molmil
Structure of the mitochondrial ribosome from Polytomella magna
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, POTASSIUM ION, ...
著者Tobiasson, V, Berzina, I, Amunts, A.
登録日2022-06-02
公開日2022-11-16
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Nat Commun, 13, 2022
7ZQ9
DownloadVisualize
BU of 7zq9 by Molmil
Dimeric PSI of Chlamydomonas reinhardtii at 2.74 A resolution (symmetry expanded)
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Naschberger, A, Amunts, A.
登録日2022-04-29
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (2.74 Å)
主引用文献Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
7ZQC
DownloadVisualize
BU of 7zqc by Molmil
Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Naschberger, A, Amunts, A.
登録日2022-04-29
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (2.31 Å)
主引用文献Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
7ZQD
DownloadVisualize
BU of 7zqd by Molmil
Dimeric PSI of Chlamydomonas reinhardtii at 2.97 A resolution
分子名称: (1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL, (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL, ...
著者Naschberger, A, Amunts, A.
登録日2022-04-29
公開日2022-11-23
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Algal photosystem I dimer and high-resolution model of PSI-plastocyanin complex.
Nat.Plants, 8, 2022
7ZM7
DownloadVisualize
BU of 7zm7 by Molmil
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (inhibited by DDM)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Laube, E, Kuehlbrandt, W.
登録日2022-04-19
公開日2022-11-30
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum.
Sci Adv, 8, 2022
7ZMG
DownloadVisualize
BU of 7zmg by Molmil
CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 1)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Laube, E, Kuehlbrandt, W.
登録日2022-04-19
公開日2022-11-30
最終更新日2022-12-07
実験手法ELECTRON MICROSCOPY (2.44 Å)
主引用文献Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum.
Sci Adv, 8, 2022
8BQ5
DownloadVisualize
BU of 8bq5 by Molmil
Cryo-EM structure of the Arabidopsis thaliana I+III2 supercomplex (Complete conformation 1 composition)
分子名称: 2,3-DIMETHOXY-5-METHYL-6-(3,11,15,19-TETRAMETHYL-EICOSA-2,6,10,14,18-PENTAENYL)-[1,4]BENZOQUINONE, AT3G07480.1, Acyl carrier protein 1, ...
著者Klusch, N, Kuehlbrandt, W.
登録日2022-11-18
公開日2023-03-22
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Cryo-EM structure of the respiratory I + III 2 supercomplex from Arabidopsis thaliana at 2 angstrom resolution.
Nat.Plants, 9, 2023
8P09
DownloadVisualize
BU of 8p09 by Molmil
48S late-stage initiation complex with non methylated mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
登録日2023-05-09
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
8B6F
DownloadVisualize
BU of 8b6f by Molmil
Cryo-EM structure of NADH:ubiquinone oxidoreductase (complex-I) from respiratory supercomplex of Tetrahymena thermophila
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2 iron, ...
著者Muhleip, A, Kock Flygaard, R, Amunts, A.
登録日2022-09-27
公開日2023-03-29
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8B6H
DownloadVisualize
BU of 8b6h by Molmil
Cryo-EM structure of cytochrome c oxidase dimer (complex IV) from respiratory supercomplex of Tetrahymena thermophila
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE, ...
著者Muhleip, A, Kock Flygaard, R, Amunts, A.
登録日2022-09-27
公開日2023-03-29
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of mitochondrial membrane bending by the I-II-III 2 -IV 2 supercomplex.
Nature, 615, 2023
8P2H
DownloadVisualize
BU of 8p2h by Molmil
Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric state
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ...
著者Gonzalez-Lopez, A, Selmer, M.
登録日2023-05-16
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric hybrid state
To Be Published
8P03
DownloadVisualize
BU of 8p03 by Molmil
48S late-stage initiation complex with m6A mRNA
分子名称: 18S ribosomal RNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Guca, E, Lima, L.H.F, Boissier, F, Hashem, Y.
登録日2023-05-09
公開日2024-03-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献N 6 -methyladenosine in 5' UTR does not promote translation initiation.
Mol.Cell, 84, 2024
8P2G
DownloadVisualize
BU of 8p2g by Molmil
Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric state
分子名称: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 2-[(3~{R},4~{S},5~{S},8~{S},9~{S},10~{S},11~{R},13~{S},14~{S},16~{S})-16-acetyloxy-4,8,10,14-tetramethyl-3,11-bis(oxidanyl)-1,2,3,4,5,6,7,9,11,12,13,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-5-cyclopentyl-pentanoic acid, ...
著者Gonzalez-Lopez, A, Selmer, M.
登録日2023-05-16
公開日2024-05-01
実験手法ELECTRON MICROSCOPY (2.02 Å)
主引用文献Cryo-EM structures of Staphylococcus aureus 70S ribosomes in complex with elongation factor G and fusidic acid
To Be Published
8CCS
DownloadVisualize
BU of 8ccs by Molmil
80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-01-27
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (1.97 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CKU
DownloadVisualize
BU of 8cku by Molmil
Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-16
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CIV
DownloadVisualize
BU of 8civ by Molmil
Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-10
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.47 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
7Z3N
DownloadVisualize
BU of 7z3n by Molmil
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1 conformation
分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ...
著者Kisonaite, M, Wild, K, Sinning, I.
登録日2022-03-02
公開日2023-04-12
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural inventory of cotranslational protein folding by the eukaryotic RAC complex.
Nat.Struct.Mol.Biol., 30, 2023
8CMJ
DownloadVisualize
BU of 8cmj by Molmil
Translocation intermediate 4 (TI-4*) of 80S S. cerevisiae ribosome with eEF2 in the absence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-20
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.79 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CG8
DownloadVisualize
BU of 8cg8 by Molmil
Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-03
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CEH
DownloadVisualize
BU of 8ceh by Molmil
Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-01
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.05 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8P16
DownloadVisualize
BU of 8p16 by Molmil
E167K RF2 on E. coli 70S release complex with UGG (Structure I)
分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
著者Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
登録日2023-05-11
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
8P17
DownloadVisualize
BU of 8p17 by Molmil
E167K RF2 on E. coli 70S release complex with UGG (Structure II)
分子名称: 1,4-DIAMINOBUTANE, 16S RNA, 23S rRNA, ...
著者Pundir, S, Larsson, D.S.D, Selmer, M, Sanyal, S.
登録日2023-05-11
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.78 Å)
主引用文献The compensatory mechanism of a naturally evolved E167K RF2 counteracting the loss of RF1 in bacteria
To Be Published
7Z3O
DownloadVisualize
BU of 7z3o by Molmil
Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2 conformation
分子名称: 18S rRNA, 26S rRNA, 40S ribosomal protein S0, ...
著者Kisonaite, M, Wild, K, Sinning, I.
登録日2022-03-02
公開日2023-04-12
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural inventory of cotranslational protein folding by the eukaryotic RAC complex.
Nat.Struct.Mol.Biol., 30, 2023

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon