Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CFZ
DownloadVisualize
BU of 1cfz by Molmil
HYDROGENASE MATURATING ENDOPEPTIDASE HYBD FROM E. COLI
分子名称: CADMIUM ION, HYDROGENASE 2 MATURATION PROTEASE
著者Fritsche, E, Paschos, A, Beisel, H.-G, Boeck, A, Huber, R.
登録日1999-03-23
公開日2000-03-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the hydrogenase maturating endopeptidase HYBD from Escherichia coli.
J.Mol.Biol., 288, 1999
3JW7
DownloadVisualize
BU of 3jw7 by Molmil
Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583 complexed with Mg and dipeptide L-Ile-L-Tyr
分子名称: Dipeptide Epimerase, GLYCEROL, ISOLEUCINE, ...
著者Fedorov, A.A, Fedorov, E.V, Imker, H.J, Sakai, A, Gerlt, J.A, Almo, S.C.
登録日2009-09-18
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
7UVR
DownloadVisualize
BU of 7uvr by Molmil
Crystal structure of human ClpP protease in complex with TR-65
分子名称: 3-{[(10R)-4-[(4-chlorophenyl)methyl]-5-oxo-1,2,4,5,8,9-hexahydroimidazo[1,2-a]pyrido[3,4-e]pyrimidin-7(6H)-yl]methyl}benzonitrile, ATP-dependent Clp protease proteolytic subunit, mitochondrial
著者Mabanglo, M.F, Houry, W.A.
登録日2022-05-02
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Potent ClpP agonists with anticancer properties bind with improved structural complementarity and alter the mitochondrial N-terminome.
Structure, 31, 2023
7UVM
DownloadVisualize
BU of 7uvm by Molmil
Crystal structure of human ClpP protease in complex with TR-27
分子名称: (10R)-4-[(4-chlorophenyl)methyl]-7-[(3-ethynylphenyl)methyl]-2,4,6,7,8,9-hexahydroimidazo[1,2-a]pyrido[3,4-e]pyrimidin-5(1H)-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
著者Mabanglo, M.F, Houry, W.A.
登録日2022-05-02
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Potent ClpP agonists with anticancer properties bind with improved structural complementarity and alter the mitochondrial N-terminome.
Structure, 31, 2023
3K1G
DownloadVisualize
BU of 3k1g by Molmil
Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583 complexed with Mg and dipeptide L-Ser-L-Tyr
分子名称: Dipeptide Epimerase, GLYCEROL, MAGNESIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Imker, H.J, Sakai, A, Gerlt, J.A, Almo, S.C.
登録日2009-09-27
公開日2010-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
5JWZ
DownloadVisualize
BU of 5jwz by Molmil
Structure of a Putative Xyloglucanase from the Cellulolytic Bacteria Streptomyces sp. SirexAA-E
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Cellulose-binding family II
著者Kositzke, A.W, Bianchetti, C.M.
登録日2016-05-12
公開日2016-06-01
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献Structure of a Putative Xyloglucanase from the Cellulolytic Bacteria Streptomyces sp. SirexAA-E, secreted, biomass degradation
To Be Published
5EUU
DownloadVisualize
BU of 5euu by Molmil
Rat prestin STAS domain in complex with chloride
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Prestin,Prestin, ...
著者Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R.
登録日2015-11-19
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
Biochem.J., 473, 2016
5EUS
DownloadVisualize
BU of 5eus by Molmil
Rat prestin STAS domain in complex with bromide
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, Prestin,Rat prestin STAS domain, ...
著者Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R.
登録日2015-11-19
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.833 Å)
主引用文献The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
Biochem.J., 473, 2016
5EUW
DownloadVisualize
BU of 5euw by Molmil
Rat prestin STAS domain in complex with nitrate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NITRATE ION, ...
著者Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R.
登録日2015-11-19
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
Biochem.J., 473, 2016
5EUX
DownloadVisualize
BU of 5eux by Molmil
Rat prestin STAS domain in complex with thiocyanate
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Prestin,Prestin, ...
著者Lolli, G, Pasqualetto, E, Costanzi, E, Bonetto, G, Battistutta, R.
登録日2015-11-19
公開日2015-12-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.038 Å)
主引用文献The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
Biochem.J., 473, 2016
8JN6
DownloadVisualize
BU of 8jn6 by Molmil
Cryo-EM structure of the small tail club shape particle of dengue virus serotype 3 strain CH53489 in complex with human antibody DENV-290 Fab at 37 deg C
分子名称: Human antibody DENV-290 heavy chain, Human antibody DENV-290 light chain, Polyprotein (Fragment)
著者Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
登録日2023-06-06
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (9.8 Å)
主引用文献Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN7
DownloadVisualize
BU of 8jn7 by Molmil
Cryo-EM structure of the big tail club shape particle of dengue virus serotype 3 strain CH53489 in complex with human antibody DENV-290 Fab at 37 deg C
分子名称: Human antibody DENV-290 heavy chain, Human antibody DENV-290 light chain, Polyprotein (Fragment)
著者Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
登録日2023-06-06
公開日2024-06-12
実験手法ELECTRON MICROSCOPY (11 Å)
主引用文献Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
3KWC
DownloadVisualize
BU of 3kwc by Molmil
Oxidized, active structure of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM
分子名称: CHLORIDE ION, Carbon dioxide concentrating mechanism protein, ISOPROPYL ALCOHOL, ...
著者Kimber, M.S, Castel, S.E, Pena, K.L.
登録日2009-12-01
公開日2010-02-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of the oxidative activation of the carboxysomal {gamma}-carbonic anhydrase, CcmM.
Proc.Natl.Acad.Sci.USA, 107, 2010
1OU4
DownloadVisualize
BU of 1ou4 by Molmil
Native PNP +Talo
分子名称: 6-METHYLPURINE, PHOSPHATE ION, Purine nucleoside phosphorylase
著者Ealick, S.E, Bennett, E.M, Anand, R, Secrist, J.A, Parker, W.B, Hassan, A.E, Allan, P.W, McPherson, D.T, Sorscher, E.J.
登録日2003-03-24
公開日2004-02-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Designer gene therapy using an Escherichia coli purine nucleoside phosphorylase/prodrug system.
Chem.Biol., 10, 2003
6R0C
DownloadVisualize
BU of 6r0c by Molmil
Human-D02 Nucleosome Core Particle with biotin-streptavidin label
分子名称: DNA (142-MER), Histone H2A type 1, Histone H2B type 1-C/E/F/G/I, ...
著者Pye, V.E, Wilson, M.D, Cherepanov, P, Costa, A.
登録日2019-03-12
公開日2019-09-25
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Retroviral integration into nucleosomes through DNA looping and sliding along the histone octamer.
Nat Commun, 10, 2019
5L6S
DownloadVisualize
BU of 5l6s by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a positive allosteric regulator beta-fructose-1,6-diphosphate (FBP) - AGPase*FBP
分子名称: 1,6-di-O-phosphono-beta-D-fructofuranose, Glucose-1-phosphate adenylyltransferase, SULFATE ION
著者Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
登録日2016-05-31
公開日2016-09-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
8B5Q
DownloadVisualize
BU of 8b5q by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UMP
分子名称: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-MONOPHOSPHATE
著者Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
登録日2022-09-24
公開日2023-10-04
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B5S
DownloadVisualize
BU of 8b5s by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-glucose
分子名称: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, URIDINE-5'-DIPHOSPHATE-GLUCOSE
著者Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
登録日2022-09-24
公開日2023-10-04
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B62
DownloadVisualize
BU of 8b62 by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-galactose
分子名称: GALACTOSE-URIDINE-5'-DIPHOSPHATE, GLYCEROL, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG
著者Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
登録日2022-09-25
公開日2023-10-04
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B63
DownloadVisualize
BU of 8b63 by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-GalNAc
分子名称: ACETATE ION, UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, ...
著者Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
登録日2022-09-25
公開日2023-10-04
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8ODT
DownloadVisualize
BU of 8odt by Molmil
Structure of TolQR complex from E.coli
分子名称: Tol-Pal system protein TolQ, Tol-Pal system protein TolR
著者Webby, M.N, Kleanthous, C, Press, C.E.
登録日2023-03-09
公開日2023-11-01
最終更新日2023-11-29
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Tunable force transduction through the Escherichia coli cell envelope.
Proc.Natl.Acad.Sci.USA, 120, 2023
6WED
DownloadVisualize
BU of 6wed by Molmil
Copper-bound E44Q variant of Campylobacter jejuni P19
分子名称: COPPER (II) ION, SULFATE ION, Uncharacterized protein
著者Chan, A.C, Murphy, M.E.
登録日2020-04-02
公開日2021-02-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A copper site is required for iron transport by the periplasmic proteins P19 and FetP.
Metallomics, 12, 2020
4WUB
DownloadVisualize
BU of 4wub by Molmil
N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM KCl condition
分子名称: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M.
登録日2014-10-31
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The role of monovalent cations in the ATPase reaction of DNA gyrase
Acta Crystallogr.,Sect.D, 71, 2015
4WF5
DownloadVisualize
BU of 4wf5 by Molmil
Crystal structure of E.Coli DsbA soaked with compound 4
分子名称: 1,2-ETHANEDIOL, 4-methyl-2-[4-(trifluoromethyl)phenyl]-1,3-thiazole-5-carboxylic acid, COPPER (II) ION, ...
著者Adams, L.A, Sharma, P, Mohanty, B, Ilyichova, O.V, Mulcair, M.D, Williams, M.L, Gleeson, E.C, Totsika, M, Doak, B.C, Caria, S, Rimmer, K, Shouldice, S.R, Vazirani, M, Headey, S.J, Plumb, B.R, Martin, J.L, Heras, B, Simpson, J.S, Scanlon, M.J.
登録日2014-09-12
公開日2015-01-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Application of Fragment-Based Screening to the Design of Inhibitors of Escherichia coli DsbA.
Angew.Chem.Int.Ed.Engl., 54, 2015
4WUC
DownloadVisualize
BU of 4wuc by Molmil
N-terminal 43 kDa fragment of the E. coli DNA gyrase B subunit grown from 100 mM NaCl condition
分子名称: CHLORIDE ION, DNA gyrase subunit B, MAGNESIUM ION, ...
著者Hearnshaw, S.J, Chung, T.T, Stevenson, C.E.M, Maxwell, A, Lawson, D.M.
登録日2014-10-31
公開日2015-04-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The role of monovalent cations in the ATPase reaction of DNA gyrase
Acta Crystallogr.,Sect.D, 71, 2015

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon